RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	RSM10	Q03201	203 aa		3.6	□□□□□ -1.83
SHE1	YBL031W	MRPS17	Q03246	237 aa	Predicted RBP	3.6	□□□□□ -1.83
SHE1	YBL031W	INP1	Q03694	420 aa		3.6	□□□□□ -1.83
SHE1	YBL031W	DXO1	Q06349	442 aa		3.6	□□□□□ -1.83
SHE1	YBL031W	YPR147C	Q06522	304 aa	Known RBP	3.6	□□□□□ -1.83
SHE1	YBL031W	SYM1	Q06563	197 aa		3.6	□□□□□ -1.83
SHE1	YBL031W	YOR343C	Q12484	108 aa		3.6	□□□□□ -1.83
SHE1	YBL031W	CDC36	P06100	191 aa	Predicted RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	RPS16A	P0CX51	143 aa	Known RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	RPS16B	P0CX52	143 aa	Known RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	VMA5	P31412	392 aa	Known RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	FMT1	P32785	401 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	SRY1	P36007	326 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	TRS20	P38334	175 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	YPT31	P38555	223 aa	Known RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	RTC3	P38804	111 aa	Predicted RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	YEA4	P40004	342 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	YIL086C	P40503	102 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	YIR035C	P40579	254 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	OTU1	P43558	301 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	YHC3	P47040	408 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	YGL114W	P53134	725 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	TIM21	P53220	239 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	FYV6	P53913	173 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	PET191	Q02772	108 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	PAL1	Q05518	499 aa	Known RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	YLR179C	Q06252	201 aa	Known RBP	3.59	□□□□□ -1.83
SHE1	YBL031W	PAM18	Q07914	168 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	MED4	Q12343	284 aa		3.59	□□□□□ -1.83
SHE1	YBL031W	YDR157W	A0A023PZE8	133 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SHE1	YBL031W	SEC22	P22214	214 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	MIR1	P23641	311 aa	Known RBP	3.58	□□□□□ -1.84
SHE1	YBL031W	RPS27A	P35997	82 aa	Known RBP	3.58	□□□□□ -1.84
SHE1	YBL031W	SLM6	P38343	150 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	RPS27B	P38711	82 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SHE1	YBL031W	SMD3	P43321	101 aa	Known RBP	3.58	□□□□□ -1.84
SHE1	YBL031W	MOB2	P43563	287 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	YFR057W	P43625	151 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	MCM22	P47167	239 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	YGL159W	P53110	370 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	TMA23	Q03525	211 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	NMA1	Q06178	401 aa	Known RBP	3.58	□□□□□ -1.84
SHE1	YBL031W	HRT1	Q08273	121 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	IZH2	Q12442	317 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	UBA3	Q99344	299 aa		3.58	□□□□□ -1.84
SHE1	YBL031W	YAL064W-B	O13512	126 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	TPI1	P00942	248 aa	Known RBP	3.57	□□□□□ -1.84
SHE1	YBL031W	YHR214C-D	P0CX93	97 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	RPL30	P14120	105 aa	Known RBP	3.57	□□□□□ -1.84
SHE1	YBL031W	RPB3	P16370	318 aa	Known RBP	3.57	□□□□□ -1.84
SHE1	YBL031W	APA2	P22108	325 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	CWP1	P28319	239 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	YUH1	P35127	236 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	HSP10	P38910	106 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	SUR2	P38992	349 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	YEA6	P39953	335 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	PAM16	P42949	149 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	RNH201	P53942	307 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	HHT1	P61830	136 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	GAT3	Q07928	141 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	FCY22	Q12119	530 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	YPR063C	Q12160	140 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	HMS1	Q12398	434 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	AGC1	Q12482	902 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	VMA9	Q3E7B6	73 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	YLR365W	Q7LIF2	110 aa		3.57	□□□□□ -1.84
SHE1	YBL031W	CDC28	P00546	298 aa	Known RBP	3.56	□□□□□ -1.84
SHE1	YBL031W	YLL053C	P0CD98	152 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	STE18	P18852	110 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	SCO1	P23833	295 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	RPL16A	P26784	199 aa	Known RBP	3.56	□□□□□ -1.84
SHE1	YBL031W	PPA2	P28239	310 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	YBL010C	P32788	280 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	MRPS5	P33759	307 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	CCS1	P40202	249 aa	Known RBP	3.56	□□□□□ -1.84
SHE1	YBL031W	PAU15	P40585	124 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	KEG1	P43614	200 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	YJR056C	P47115	236 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	YJR111C	P47148	283 aa	Known RBP	3.56	□□□□□ -1.84
SHE1	YBL031W	SOL1	P50278	321 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	MGA1	P53050	456 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	LST7	P53237	242 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	CGI121	Q03705	181 aa	Known RBP	3.56	□□□□□ -1.84
SHE1	YBL031W	THI74	Q04083	370 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	YMR090W	Q04304	227 aa	Known RBP	3.56	□□□□□ -1.84
SHE1	YBL031W	RFU1	Q08003	200 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	RDL2	Q08742	149 aa	Known RBP	3.56	□□□□□ -1.84
SHE1	YBL031W	SPO24	Q3E752	67 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	COA6	Q3E846	104 aa		3.56	□□□□□ -1.84
SHE1	YBL031W	SGA1	P08019	549 aa		3.55	□□□□□ -1.84
SHE1	YBL031W	ARO4	P32449	370 aa	Known RBP	3.55	□□□□□ -1.84
SHE1	YBL031W	CLB6	P32943	380 aa		3.55	□□□□□ -1.84
SHE1	YBL031W	ATG8	P38182	117 aa	RIP-Chip data	3.55	□□□□□ -1.84	not detected
SHE1	YBL031W	PRS2	P38620	318 aa	Known RBP	3.55	□□□□□ -1.84
SHE1	YBL031W	YJL016W	P47072	561 aa		3.55	□□□□□ -1.84
SHE1	YBL031W	TRM9	P49957	279 aa		3.55	□□□□□ -1.84
SHE1	YBL031W	YGL262W	P53054	175 aa		3.55	□□□□□ -1.84
SHE1	YBL031W	BRR6	P53062	197 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms