RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	PLP1	Q04004	230 aa		3.05	□□□□□ -1.92
YAL004W	YAL004W	HNT1	Q04344	158 aa	Known RBP	3.05	□□□□□ -1.92
YAL004W	YAL004W	LIP2	Q06005	328 aa		3.05	□□□□□ -1.92
YAL004W	YAL004W	SPC3	Q12133	184 aa		3.05	□□□□□ -1.92
YAL004W	YAL004W	MDM32	Q12171	622 aa		3.05	□□□□□ -1.92
YAL004W	YAL004W	UBR2	Q07963	1872 aa		3.05	□□□□□ -1.92
YAL004W	YAL004W	HIS3	P06633	220 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	RPS18A	P0CX55	146 aa	Known RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	RPS18B	P0CX56	146 aa	Predicted RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	SCO1	P23833	295 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	FUN26	P31381	517 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	APS1	P35181	156 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	PRY2	P36110	329 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	UTP30	P36144	274 aa	Known RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	PAU24	P38155	120 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	YBR137W	P38276	179 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	RPS20	P38701	121 aa	Known RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	PTH1	P38876	190 aa	Known RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	RMD6	P39975	231 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	GLE2	P40066	365 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	YER137C	P40083	148 aa	Known RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	ATG18	P43601	500 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	ALB1	P47019	175 aa	Predicted RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	IKS1	P47042	667 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	AIM25	P47140	327 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	RRG7	Q08774	242 aa	Predicted RBP	3.04	□□□□□ -1.92
YAL004W	YAL004W	RAX2	Q12465	1220 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	Q0144	Q9ZZW2	109 aa		3.04	□□□□□ -1.92
YAL004W	YAL004W	YCR023C	P25351	611 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	STP22	P25604	385 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	CDC50	P25656	391 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	SUA7	P29055	345 aa	Predicted RBP	3.03	□□□□□ -1.92
YAL004W	YAL004W	PAU2	P32612	120 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	TIM12	P32830	109 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	TMA19	P35691	167 aa	Known RBP	3.03	□□□□□ -1.92
YAL004W	YAL004W	GPX1	P36014	167 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
YAL004W	YAL004W	YBR242W	P38331	238 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	SLM6	P38343	150 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	OST1	P41543	476 aa	Known RBP	3.03	□□□□□ -1.92
YAL004W	YAL004W	CIS3	P47001	227 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	ERV29	P53337	310 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	YNL184C	P53876	108 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	LSM7	P53905	115 aa	Known RBP	3.03	□□□□□ -1.92
YAL004W	YAL004W	NCE101	Q02820	53 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	RAV2	Q03956	351 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	LOA1	Q06508	300 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	YPL257W	Q08974	193 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	WIP1	Q2V2P8	89 aa		3.03	□□□□□ -1.92
YAL004W	YAL004W	SPS2	P08459	502 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	FCY2	P17064	533 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	ERD2	P18414	219 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	ATG22	P25568	528 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	YCR022C	P25620	114 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	ATG15	P25641	520 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	SFK1	P35735	353 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	HOT13	P36078	116 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	MRPL15	P36523	253 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	NAT2	P37293	288 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	MIX23	P38162	196 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	MTC4	P38335	694 aa	Known RBP	3.02	□□□□□ -1.93
YAL004W	YAL004W	PRS3	P38689	320 aa	Known RBP	3.02	□□□□□ -1.93
YAL004W	YAL004W	YIL152W	P40455	235 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	YIL086C	P40503	102 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	HAC1	P41546	238 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	MNN5	P46982	586 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	YGL034C	P53186	121 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	YGR018C	P53211	109 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	TPC1	P53257	314 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	CRZ1	P53968	678 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	MRX11	Q03079	207 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	SDC1	Q03323	175 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	DML1	Q03652	475 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	YMR317W	Q04893	1140 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	YPR174C	Q06616	221 aa	Predicted RBP	3.02	□□□□□ -1.93
YAL004W	YAL004W	ATG41	Q12048	136 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	MCP1	Q12106	302 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	PSF1	Q12488	208 aa		3.02	□□□□□ -1.93
YAL004W	YAL004W	HHF1	P02309	103 aa	Known RBP	3.01	□□□□□ -1.93
YAL004W	YAL004W	RPL25	P04456	142 aa	Known RBP	3.01	□□□□□ -1.93
YAL004W	YAL004W	ATS1	P31386	333 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	OCH1	P31755	480 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	RPS27A	P35997	82 aa	Known RBP	3.01	□□□□□ -1.93
YAL004W	YAL004W	RPS27B	P38711	82 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	ECM34	P38728	170 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	DOG2	P38773	246 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	DOG1	P38774	246 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	NSG1	P38837	291 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	PEX17	P40155	199 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	SYS1	P41544	203 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	UBC12	P52491	188 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	YNR062C	P53748	327 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	YNL046W	P53956	172 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	UBC7	Q02159	165 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	FSH2	Q05015	223 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	SHH4	Q06236	168 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	KEI1	Q06346	221 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	SYC1	Q08553	188 aa	Predicted RBP	3.01	□□□□□ -1.93
YAL004W	YAL004W	YOR186W	Q08560	144 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	SLO1	Q3E784	85 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms