RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 VMA8P32610 256 aaKnown RBP-0.96□□□□□ -2.56
snR50snR50 YBL010CP32788 280 aa-0.96□□□□□ -2.56
snR50snR50 CIN5P40917 295 aa-0.96□□□□□ -2.56
snR50snR50 LOC1P43586 204 aaPredicted RBP-0.96□□□□□ -2.56
snR50snR50 SBH2P52871 88 aa-0.96□□□□□ -2.56
snR50snR50 PDR17P53844 350 aa-0.96□□□□□ -2.56
snR50snR50 YNL260CP53846 198 aa-0.96□□□□□ -2.56
snR50snR50 YLR297WQ05899 129 aa-0.96□□□□□ -2.56
snR50snR50 DGA1Q08650 418 aa-0.96□□□□□ -2.56
snR50snR50 MCP1Q12106 302 aa-0.96□□□□□ -2.56
snR50snR50 MATALPHA2P0CY08 210 aa-0.97□□□□□ -2.56
snR50snR50 HMLALPHA2P0CY09 210 aa-0.97□□□□□ -2.56
snR50snR50 OM45P16547 393 aa-0.97□□□□□ -2.56
snR50snR50 YPK2P18961 677 aa-0.97□□□□□ -2.56
snR50snR50 MEK1P24719 497 aaPredicted RBP-0.97□□□□□ -2.56
snR50snR50 SEC17P32602 292 aa-0.97□□□□□ -2.56
snR50snR50 RIB7P33312 244 aa-0.97□□□□□ -2.56
snR50snR50 SGE1P33335 543 aa-0.97□□□□□ -2.56
snR50snR50 SKG1P36169 355 aa-0.97□□□□□ -2.56
snR50snR50 SSO2P39926 295 aa-0.97□□□□□ -2.56
snR50snR50 RFC2P40348 353 aa-0.97□□□□□ -2.56
snR50snR50 GLR1P41921 483 aaKnown RBP-0.97□□□□□ -2.56
snR50snR50 MVB12P42939 101 aa-0.97□□□□□ -2.56
snR50snR50 MPC3P53311 146 aa-0.97□□□□□ -2.56
snR50snR50 SEI1Q06058 285 aa-0.97□□□□□ -2.56
snR50snR50 YPR098CQ06089 161 aa-0.97□□□□□ -2.56
snR50snR50 FRE6Q12473 712 aa-0.97□□□□□ -2.56
snR50snR50 MET16P18408 261 aaPredicted RBP-0.98□□□□□ -2.57
snR50snR50 PHO13P19881 312 aa-0.98□□□□□ -2.57
snR50snR50 OPI1P21957 404 aa-0.98□□□□□ -2.57
snR50snR50 PRE1P22141 198 aaKnown RBP-0.98□□□□□ -2.57
snR50snR50 YSR3P23501 404 aa-0.98□□□□□ -2.57
snR50snR50 CSM1P25651 190 aa-0.98□□□□□ -2.57
snR50snR50 YBR096WP38256 230 aa-0.98□□□□□ -2.57
snR50snR50 OTU1P43558 301 aa-0.98□□□□□ -2.57
snR50snR50 MRX5P47007 382 aa-0.98□□□□□ -2.57
snR50snR50 CCC1P47818 322 aa-0.98□□□□□ -2.57
snR50snR50 YNL122CP53921 115 aaPredicted RBP-0.98□□□□□ -2.57
snR50snR50 YMR295CQ03559 197 aa-0.98□□□□□ -2.57
snR50snR50 FCY1Q12178 158 aa-0.98□□□□□ -2.57
snR50snR50 PST2Q12335 198 aaKnown RBP-0.98□□□□□ -2.57
snR50snR50 RRP36Q12481 300 aaPredicted RBP-0.98□□□□□ -2.57
snR50snR50 GSP2P32836 220 aaKnown RBP-0.99□□□□□ -2.57
snR50snR50 PRS2P38620 318 aaKnown RBP-0.99□□□□□ -2.57
snR50snR50 YHR127WP38833 243 aaKnown RBP-0.99□□□□□ -2.57
snR50snR50 SMB1P40018 196 aaKnown RBP-0.99□□□□□ -2.57
snR50snR50 CCS1P40202 249 aaKnown RBP-0.99□□□□□ -2.57
snR50snR50 BXI1P48558 297 aa-0.99□□□□□ -2.57
snR50snR50 YGL235WP53071 178 aa-0.99□□□□□ -2.57
snR50snR50 PRM8P53174 237 aa-0.99□□□□□ -2.57
snR50snR50 YDR274CP87283 123 aa-0.99□□□□□ -2.57
snR50snR50 RRP17Q04031 235 aaPredicted RBP-0.99□□□□□ -2.57
snR50snR50 YDR286CQ05530 114 aa-0.99□□□□□ -2.57
snR50snR50 RRT8Q08219 342 aa-0.99□□□□□ -2.57
snR50snR50 SEY1Q99287 776 aa-0.99□□□□□ -2.57
snR50snR50 HIS1P00498 297 aaKnown RBP-1□□□□□ -2.57
snR50snR50 STE18P18852 110 aa-1□□□□□ -2.57
snR50snR50 DBP3P20447 523 aaKnown RBP-1□□□□□ -2.57
snR50snR50 YCR023CP25351 611 aa-1□□□□□ -2.57
snR50snR50 YKL075CP36083 450 aa-1□□□□□ -2.57
snR50snR50 CAF4P36130 643 aa-1□□□□□ -2.57
snR50snR50 AST2P39945 430 aaKnown RBP-1□□□□□ -2.57
snR50snR50 MPM1P40364 252 aa-1□□□□□ -2.57
snR50snR50 POG1P40473 351 aa-1□□□□□ -2.57
snR50snR50 GPI17Q04080 534 aa-1□□□□□ -2.57
snR50snR50 GMC2Q06201 188 aa-1□□□□□ -2.57
snR50snR50 IRC23Q08416 157 aa-1□□□□□ -2.57
snR50snR50 POR1P04840 283 aaKnown RBP-1.01□□□□□ -2.57
snR50snR50 STF2P16965 84 aa-1.01□□□□□ -2.57
snR50snR50 ATP15P21306 62 aa-1.01□□□□□ -2.57
snR50snR50 BET1P22804 142 aa-1.01□□□□□ -2.57
snR50snR50 MAK31P23059 88 aa-1.01□□□□□ -2.57
snR50snR50 SRB4P32569 687 aa-1.01□□□□□ -2.57
snR50snR50 BFR1P38934 470 aaKnown RBP RIP-Chip data-1.01□□□□□ -2.57not detected
snR50snR50 YMR144WP40214 342 aaKnown RBP-1.01□□□□□ -2.57
snR50snR50 COA1P40452 197 aa-1.01□□□□□ -2.57
snR50snR50 NAS2P40555 220 aa-1.01□□□□□ -2.57
snR50snR50 ARP3P47117 449 aaKnown RBP-1.01□□□□□ -2.57
snR50snR50 ALG13P53178 202 aa-1.01□□□□□ -2.57
snR50snR50 RRN5Q02983 363 aa-1.01□□□□□ -2.57
snR50snR50 YDR249CQ03787 373 aa-1.01□□□□□ -2.57
snR50snR50 HRD1Q08109 551 aa-1.01□□□□□ -2.57
snR50snR50 BTS1Q12051 335 aa-1.01□□□□□ -2.57
snR50snR50 YMR030W-AQ3E760 96 aa-1.01□□□□□ -2.57
snR50snR50 GCD2P12754 651 aaPredicted RBP-1.02□□□□□ -2.57
snR50snR50 OCH1P31755 480 aa-1.02□□□□□ -2.57
snR50snR50 UTP30P36144 274 aaKnown RBP-1.02□□□□□ -2.57
snR50snR50 FMP33P46998 180 aa-1.02□□□□□ -2.57
snR50snR50 APS3P47064 194 aa-1.02□□□□□ -2.57
snR50snR50 USE1P53146 245 aa-1.02□□□□□ -2.57
snR50snR50 GET1P53192 235 aa-1.02□□□□□ -2.57
snR50snR50 RHO3Q00245 231 aaKnown RBP-1.02□□□□□ -2.57
snR50snR50 SPO19Q03029 223 aa-1.02□□□□□ -2.57
snR50snR50 MGR3Q04472 501 aa-1.02□□□□□ -2.57
snR50snR50 CFT1Q06632 1357 aaKnown RBP-1.02□□□□□ -2.57
snR50snR50 MED4Q12343 284 aa-1.02□□□□□ -2.57
snR50snR50 SNU23Q12368 194 aaPredicted RBP-1.02□□□□□ -2.57
snR50snR50 YOL164W-AQ3E7A5 60 aa-1.02□□□□□ -2.57
snR50snR50 TDA8Q6B2U8 126 aa-1.02□□□□□ -2.57
snR50snR50 IKI3Q06706 1349 aaKnown RBP-1.03□□□□□ -2.57
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms