RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 FMP49A0A023PZB3 126 aa0.17□□□□□ -2.38
snR41snR41 RPB3P16370 318 aaKnown RBP0.17□□□□□ -2.38
snR41snR41 UBC8P28263 218 aa0.17□□□□□ -2.38
snR41snR41 RPB7P34087 171 aa0.17□□□□□ -2.38
snR41snR41 APS1P35181 156 aa0.17□□□□□ -2.38
snR41snR41 RPC17P47076 161 aa0.17□□□□□ -2.38
snR41snR41 BRR6P53062 197 aa0.17□□□□□ -2.38
snR41snR41 YGR050CP53231 118 aa0.17□□□□□ -2.38
snR41snR41 MPC3P53311 146 aa0.17□□□□□ -2.38
snR41snR41 SRL4Q03085 281 aa0.17□□□□□ -2.38
snR41snR41 MGM101P32787 269 aaKnown RBP0.16□□□□□ -2.38
snR41snR41 ECM4P36156 370 aa0.16□□□□□ -2.38
snR41snR41 LDB7P38210 180 aa0.16□□□□□ -2.38
snR41snR41 UBC12P52491 188 aa0.16□□□□□ -2.38
snR41snR41 SEC4P07560 215 aaKnown RBP0.15□□□□□ -2.39
snR41snR41 YHL018WP38744 120 aaPredicted RBP0.15□□□□□ -2.39
snR41snR41 BXI1P48558 297 aa0.15□□□□□ -2.39
snR41snR41 MIC26P50087 233 aa0.15□□□□□ -2.39
snR41snR41 BNA7Q04066 261 aa0.15□□□□□ -2.39
snR41snR41 DGA1Q08650 418 aa0.15□□□□□ -2.39
snR41snR41 RRP36Q12481 300 aaPredicted RBP0.15□□□□□ -2.39
snR41snR41 YLR283WQ05867 314 aa0.14□□□□□ -2.39
snR41snR41 RIB7P33312 244 aa0.13□□□□□ -2.39
snR41snR41 YBR242WP38331 238 aa0.13□□□□□ -2.39
snR41snR41 FMC1P40491 155 aa0.13□□□□□ -2.39
snR41snR41 RRN5Q02983 363 aa0.13□□□□□ -2.39
snR41snR41 RRT8Q08219 342 aa0.13□□□□□ -2.39
snR41snR41 YFR032C-BQ8TGU2 87 aa0.13□□□□□ -2.39
snR41snR41 ODC2Q99297 307 aa0.13□□□□□ -2.39
snR41snR41 SEN2P16658 377 aa0.12□□□□□ -2.39
snR41snR41 PTM1P32857 523 aa0.12□□□□□ -2.39
snR41snR41 AIM25P47140 327 aa0.12□□□□□ -2.39
snR41snR41 YNG1Q08465 219 aa0.12□□□□□ -2.39
snR41snR41 SSO1P32867 290 aa0.11□□□□□ -2.39
snR41snR41 YHL037CP38733 133 aa0.11□□□□□ -2.39
snR41snR41 AST2P39945 430 aaKnown RBP0.11□□□□□ -2.39
snR41snR41 RMD6P39975 231 aa0.11□□□□□ -2.39
snR41snR41 UPS3Q04006 179 aa0.11□□□□□ -2.39
snR41snR41 PRP11Q07350 266 aaPredicted RBP0.11□□□□□ -2.39
snR41snR41 FIT2Q08906 153 aa0.11□□□□□ -2.39
snR41snR41 CCW12Q12127 133 aa0.11□□□□□ -2.39
snR41snR41 COX8P04039 78 aa0.1□□□□□ -2.39
snR41snR41 POR1P04840 283 aaKnown RBP0.1□□□□□ -2.39
snR41snR41 PHO85P17157 305 aa0.1□□□□□ -2.39
snR41snR41 TVP23P38962 199 aa0.1□□□□□ -2.39
snR41snR41 YIL102CP40488 101 aa0.1□□□□□ -2.39
snR41snR41 COG5P53951 403 aa0.1□□□□□ -2.39
snR41snR41 RNH202Q05635 350 aa0.1□□□□□ -2.39
snR41snR41 CKS1P20486 150 aaKnown RBP0.09□□□□□ -2.4
snR41snR41 ALG13P53178 202 aa0.09□□□□□ -2.4
snR41snR41 THG1P53215 237 aaKnown RBP0.09□□□□□ -2.4
snR41snR41 IKI3Q06706 1349 aaKnown RBP0.09□□□□□ -2.4
snR41snR41 MAG1P22134 296 aaKnown RBP0.08□□□□□ -2.4
snR41snR41 YUH1P35127 236 aa0.08□□□□□ -2.4
snR41snR41 COX15P40086 486 aa0.08□□□□□ -2.4
snR41snR41 SED1Q01589 338 aa0.08□□□□□ -2.4
snR41snR41 PET191Q02772 108 aa0.08□□□□□ -2.4
snR41snR41 OCH1P31755 480 aa0.07□□□□□ -2.4
snR41snR41 PAN3P36102 679 aaPredicted RBP0.07□□□□□ -2.4
snR41snR41 ALB1P47019 175 aaPredicted RBP0.07□□□□□ -2.4
snR41snR41 YMR226CQ05016 267 aaKnown RBP0.07□□□□□ -2.4
snR41snR41 YHR214C-EQ8TGK0 99 aa0.07□□□□□ -2.4
snR41snR41 AHT1P29589 182 aa0.06□□□□□ -2.4
snR41snR41 GET1P53192 235 aa0.06□□□□□ -2.4
snR41snR41 MET31Q03081 177 aa0.06□□□□□ -2.4
snR41snR41 HNT1Q04344 158 aaKnown RBP0.06□□□□□ -2.4
snR41snR41 IRC23Q08416 157 aa0.06□□□□□ -2.4
snR41snR41 SEY1Q99287 776 aa0.06□□□□□ -2.4
snR41snR41 YIL177CP40434 1758 aa0.06□□□□□ -2.4
snR41snR41 YJL225CP40889 1758 aa0.06□□□□□ -2.4
snR41snR41 MATALPHA1P0CY06 175 aa0.05□□□□□ -2.4
snR41snR41 HMLALPHA1P0CY07 175 aa0.05□□□□□ -2.4
snR41snR41 GCN3P14741 305 aa0.05□□□□□ -2.4
snR41snR41 ERG10P41338 398 aaKnown RBP0.05□□□□□ -2.4
snR41snR41 NOP19P53317 196 aaPredicted RBP0.05□□□□□ -2.4
snR41snR41 LSM7P53905 115 aaKnown RBP0.05□□□□□ -2.4
snR41snR41 YPR013CQ12145 317 aa0.05□□□□□ -2.4
snR41snR41 TAR1Q8TGM6 124 aa0.05□□□□□ -2.4
snR41snR41 YFL051CP43552 160 aa0.04□□□□□ -2.4
snR41snR41 YCR016WP25617 290 aaKnown RBP0.03□□□□□ -2.4
snR41snR41 ARO7P32178 256 aa0.03□□□□□ -2.4
snR41snR41 SFK1P35735 353 aa0.03□□□□□ -2.4
snR41snR41 MAK5P38112 773 aaPredicted RBP0.03□□□□□ -2.4
snR41snR41 YAR064WP39563 99 aa0.03□□□□□ -2.4
snR41snR41 DCV1P43595 202 aa0.03□□□□□ -2.4
snR41snR41 PDR17P53844 350 aa0.03□□□□□ -2.4
snR41snR41 PET117Q02771 107 aa0.03□□□□□ -2.4
snR41snR41 YMR31P19955 123 aa0.02□□□□□ -2.41
snR41snR41 YCR090CP25654 182 aaKnown RBP0.02□□□□□ -2.41
snR41snR41 VMA6P32366 345 aaKnown RBP0.02□□□□□ -2.41
snR41snR41 YMR295CQ03559 197 aa0.02□□□□□ -2.41
snR41snR41 DYN3Q04949 312 aa0.02□□□□□ -2.41
snR41snR41 FYV12Q08559 129 aa0.02□□□□□ -2.41
snR41snR41 CFT1Q06632 1357 aaKnown RBP0.02□□□□□ -2.41
snR41snR41 RPL25P04456 142 aaKnown RBP0.01□□□□□ -2.41
snR41snR41 GCN20P43535 752 aaKnown RBP0.01□□□□□ -2.41
snR41snR41 MGA1P53050 456 aa0.01□□□□□ -2.41
snR41snR41 RPL28P02406 149 aaKnown RBP0□□□□□ -2.41
snR41snR41 HMF1P40037 129 aaKnown RBP0□□□□□ -2.41
snR41snR41 IRC18P47056 224 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms