RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W RHO3Q00245 231 aaKnown RBP-0.95□□□□□ -2.56
RDS3YPR094W PET191Q02772 108 aa-0.95□□□□□ -2.56
RDS3YPR094W ERV41Q04651 352 aa-0.95□□□□□ -2.56
RDS3YPR094W SPT7P35177 1332 aa-0.95□□□□□ -2.56
RDS3YPR094W TOR1P35169 2470 aa-0.95□□□□□ -2.56
RDS3YPR094W UTP30P36144 274 aaKnown RBP-0.96□□□□□ -2.56
RDS3YPR094W ECM4P36156 370 aa-0.96□□□□□ -2.56
RDS3YPR094W YMR144WP40214 342 aaKnown RBP-0.96□□□□□ -2.56
RDS3YPR094W GMC2Q06201 188 aa-0.96□□□□□ -2.56
RDS3YPR094W DGA1Q08650 418 aa-0.96□□□□□ -2.56
RDS3YPR094W PST2Q12335 198 aaKnown RBP-0.96□□□□□ -2.56
RDS3YPR094W FMP16Q12497 93 aa-0.96□□□□□ -2.56
RDS3YPR094W TDA8Q6B2U8 126 aa-0.96□□□□□ -2.56
RDS3YPR094W ARO7P32178 256 aa-0.97□□□□□ -2.56
RDS3YPR094W YKL075CP36083 450 aa-0.97□□□□□ -2.56
RDS3YPR094W ETR1P38071 380 aa-0.97□□□□□ -2.56
RDS3YPR094W BFR1P38934 470 aaKnown RBP RIP-Chip data-0.97□□□□□ -2.56not detected
RDS3YPR094W USE1P53146 245 aa-0.97□□□□□ -2.56
RDS3YPR094W YLR126CQ12288 251 aa-0.97□□□□□ -2.56
RDS3YPR094W POR1P04840 283 aaKnown RBP-0.98□□□□□ -2.57
RDS3YPR094W ATP15P21306 62 aa-0.98□□□□□ -2.57
RDS3YPR094W SRB4P32569 687 aa-0.98□□□□□ -2.57
RDS3YPR094W MSN4P33749 630 aa-0.98□□□□□ -2.57
RDS3YPR094W AST2P39945 430 aaKnown RBP-0.98□□□□□ -2.57
RDS3YPR094W AIM25P47140 327 aa-0.98□□□□□ -2.57
RDS3YPR094W MGR2Q02889 113 aa-0.98□□□□□ -2.57
RDS3YPR094W YLR173WQ06247 608 aa-0.98□□□□□ -2.57
RDS3YPR094W IRC23Q08416 157 aa-0.98□□□□□ -2.57
RDS3YPR094W YOR034C-AQ3E735 80 aa-0.98□□□□□ -2.57
RDS3YPR094W DUR1,2P32528 1835 aaKnown RBP-0.99□□□□□ -2.57
RDS3YPR094W PHO85P17157 305 aa-0.99□□□□□ -2.57
RDS3YPR094W ASF2P32448 525 aaPredicted RBP-0.99□□□□□ -2.57
RDS3YPR094W SHB17P36136 271 aaKnown RBP-0.99□□□□□ -2.57
RDS3YPR094W YJR149WP47177 404 aa-0.99□□□□□ -2.57
RDS3YPR094W YGL235WP53071 178 aa-0.99□□□□□ -2.57
RDS3YPR094W YDR209CQ03480 137 aa-0.99□□□□□ -2.57
RDS3YPR094W BTS1Q12051 335 aa-0.99□□□□□ -2.57
RDS3YPR094W SNU23Q12368 194 aaPredicted RBP-0.99□□□□□ -2.57
RDS3YPR094W DRS2P39524 1355 aa-0.99□□□□□ -2.57
RDS3YPR094W BNI1P41832 1953 aa-0.99□□□□□ -2.57
RDS3YPR094W CSF1Q12150 2958 aa-1□□□□□ -2.57
RDS3YPR094W COX2P00410 251 aa-1□□□□□ -2.57
RDS3YPR094W URA5P13298 226 aaKnown RBP-1□□□□□ -2.57
RDS3YPR094W PPA2P28239 310 aa-1□□□□□ -2.57
RDS3YPR094W IDH1P28834 360 aaKnown RBP RIP-Chip data-1□□□□□ -2.57not detected
RDS3YPR094W HTD2P38790 280 aaKnown RBP-1□□□□□ -2.57
RDS3YPR094W OSW5P40219 148 aa-1□□□□□ -2.57
RDS3YPR094W RCF1Q03713 159 aa-1□□□□□ -2.57
RDS3YPR094W YDR249CQ03787 373 aa-1□□□□□ -2.57
RDS3YPR094W MGR3Q04472 501 aa-1□□□□□ -2.57
RDS3YPR094W GET4Q12125 312 aa-1□□□□□ -2.57
RDS3YPR094W FCY1Q12178 158 aa-1□□□□□ -2.57
RDS3YPR094W LSO2Q3E772 92 aaKnown RBP-1□□□□□ -2.57
RDS3YPR094W SSK22P25390 1331 aaPredicted RBP-1□□□□□ -2.57
RDS3YPR094W YAR023CD6VPM8 179 aa-1.01□□□□□ -2.57
RDS3YPR094W KIN28P06242 306 aa-1.01□□□□□ -2.57
RDS3YPR094W RPS22AP0C0W1 130 aaKnown RBP-1.01□□□□□ -2.57
RDS3YPR094W MRP1P10662 321 aaKnown RBP-1.01□□□□□ -2.57
RDS3YPR094W BET1P22804 142 aa-1.01□□□□□ -2.57
RDS3YPR094W ADE1P27616 306 aa-1.01□□□□□ -2.57
RDS3YPR094W GSP2P32836 220 aaKnown RBP-1.01□□□□□ -2.57
RDS3YPR094W SFK1P35735 353 aa-1.01□□□□□ -2.57
RDS3YPR094W MPM1P40364 252 aa-1.01□□□□□ -2.57
RDS3YPR094W SBH2P52871 88 aa-1.01□□□□□ -2.57
RDS3YPR094W YNL122CP53921 115 aaPredicted RBP-1.01□□□□□ -2.57
RDS3YPR094W YML108WQ03759 105 aa-1.01□□□□□ -2.57
RDS3YPR094W YOR342CQ12182 319 aa-1.01□□□□□ -2.57
RDS3YPR094W RPS22BQ3E7Y3 130 aaKnown RBP-1.01□□□□□ -2.57
RDS3YPR094W LAA1P39526 2014 aa-1.01□□□□□ -2.57
RDS3YPR094W RPB3P16370 318 aaKnown RBP-1.02□□□□□ -2.57
RDS3YPR094W STF2P16965 84 aa-1.02□□□□□ -2.57
RDS3YPR094W YPK2P18961 677 aa-1.02□□□□□ -2.57
RDS3YPR094W RIB7P33312 244 aa-1.02□□□□□ -2.57
RDS3YPR094W YHR140WP38842 239 aa-1.02□□□□□ -2.57
RDS3YPR094W POG1P40473 351 aa-1.02□□□□□ -2.57
RDS3YPR094W GSC2P40989 1895 aa-1.02□□□□□ -2.57
RDS3YPR094W CUP9P41817 306 aa-1.02□□□□□ -2.57
RDS3YPR094W GET1P53192 235 aa-1.02□□□□□ -2.57
RDS3YPR094W KSS1P14681 368 aa-1.03□□□□□ -2.57
RDS3YPR094W POL30P15873 258 aaKnown RBP-1.03□□□□□ -2.57
RDS3YPR094W OPI1P21957 404 aa-1.03□□□□□ -2.57
RDS3YPR094W TCA17P32613 152 aa-1.03□□□□□ -2.57
RDS3YPR094W YBL010CP32788 280 aa-1.03□□□□□ -2.57
RDS3YPR094W PAM17P36147 197 aa-1.03□□□□□ -2.57
RDS3YPR094W CIN5P40917 295 aa-1.03□□□□□ -2.57
RDS3YPR094W SER2P42941 309 aa-1.03□□□□□ -2.57
RDS3YPR094W YAR1P46683 200 aa-1.03□□□□□ -2.57
RDS3YPR094W MCM22P47167 239 aa-1.03□□□□□ -2.57
RDS3YPR094W YGL230CP53074 147 aa-1.03□□□□□ -2.57
RDS3YPR094W PRM8P53174 237 aa-1.03□□□□□ -2.57
RDS3YPR094W PDR17P53844 350 aa-1.03□□□□□ -2.57
RDS3YPR094W RRN5Q02983 363 aa-1.03□□□□□ -2.57
RDS3YPR094W RRP17Q04031 235 aaPredicted RBP-1.03□□□□□ -2.57
RDS3YPR094W CSM4Q08955 156 aa-1.03□□□□□ -2.57
RDS3YPR094W TCP1P12612 559 aaKnown RBP-1.04□□□□□ -2.58
RDS3YPR094W YCR023CP25351 611 aa-1.04□□□□□ -2.58
RDS3YPR094W CLG1P35190 452 aa-1.04□□□□□ -2.58
RDS3YPR094W TRM9P49957 279 aa-1.04□□□□□ -2.58
RDS3YPR094W SOL1P50278 321 aa-1.04□□□□□ -2.58
RDS3YPR094W NOP19P53317 196 aaPredicted RBP-1.04□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms