RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RPD3P32561 433 aa6.95□□□□□ -1.3
SRP54YPR088C SOR1P35497 357 aaKnown RBP6.95□□□□□ -1.3
SRP54YPR088C MSO1P53604 210 aaKnown RBP6.95□□□□□ -1.3
SRP54YPR088C SMM1P53720 384 aaKnown RBP6.95□□□□□ -1.3
SRP54YPR088C YNR064CP53750 290 aa6.95□□□□□ -1.3
SRP54YPR088C WSC2P53832 503 aa6.95□□□□□ -1.3
SRP54YPR088C EST3Q03096 181 aa6.95□□□□□ -1.3
SRP54YPR088C SOR2Q07786 357 aa6.95□□□□□ -1.3
SRP54YPR088C FCF2Q12035 217 aaPredicted RBP6.95□□□□□ -1.3
SRP54YPR088C YBL029C-AQ3E756 94 aa6.95□□□□□ -1.3
SRP54YPR088C BOL1Q3E793 110 aa6.95□□□□□ -1.3
SRP54YPR088C ROX3P25046 220 aa6.94□□□□□ -1.3
SRP54YPR088C BUL1P48524 976 aa6.94□□□□□ -1.3
SRP54YPR088C INN1P53901 409 aa6.94□□□□□ -1.3
SRP54YPR088C TIM44Q01852 431 aa6.94□□□□□ -1.3
SRP54YPR088C YCL048W-AQ2V2Q2 79 aa6.94□□□□□ -1.3
SRP54YPR088C RPP1AP05318 106 aaPredicted RBP6.94□□□□□ -1.3
SRP54YPR088C YMR31P19955 123 aa6.94□□□□□ -1.3
SRP54YPR088C MRS4P23500 304 aa6.94□□□□□ -1.3
SRP54YPR088C ERV1P27882 189 aa6.94□□□□□ -1.3
SRP54YPR088C TCA17P32613 152 aa6.94□□□□□ -1.3
SRP54YPR088C YKL162CP36052 402 aa6.94□□□□□ -1.3
SRP54YPR088C SLM6P38343 150 aa6.94□□□□□ -1.3
SRP54YPR088C CUE1P38428 203 aa6.94□□□□□ -1.3
SRP54YPR088C YHR138CP38841 114 aaPredicted RBP6.94□□□□□ -1.3
SRP54YPR088C LPP1Q04396 274 aa6.94□□□□□ -1.3
SRP54YPR088C TMC1Q08422 150 aaPredicted RBP6.94□□□□□ -1.3
SRP54YPR088C YDL009CQ12210 107 aa6.94□□□□□ -1.3
SRP54YPR088C ATG5Q12380 294 aa6.94□□□□□ -1.3
SRP54YPR088C AIM45Q12480 344 aaKnown RBP6.94□□□□□ -1.3
SRP54YPR088C YBR255C-AQ3E776 120 aa6.94□□□□□ -1.3
SRP54YPR088C UBI4P0CG63 381 aaKnown RBP6.93□□□□□ -1.3
SRP54YPR088C ECM31P38122 312 aa6.93□□□□□ -1.3
SRP54YPR088C GPI18P38211 433 aa6.93□□□□□ -1.3
SRP54YPR088C YHL044WP38727 235 aa6.93□□□□□ -1.3
SRP54YPR088C AIR1P40507 360 aaKnown RBP6.93□□□□□ -1.3
SRP54YPR088C YMR090WQ04304 227 aaKnown RBP6.93□□□□□ -1.3
SRP54YPR088C YPD1Q07688 167 aa6.93□□□□□ -1.3
SRP54YPR088C ATP14Q12349 124 aa6.93□□□□□ -1.3
SRP54YPR088C SPO24Q3E752 67 aa6.93□□□□□ -1.3
SRP54YPR088C BPH1P25356 2167 aa6.92□□□□□ -1.3
SRP54YPR088C SPS18P32572 300 aa6.92□□□□□ -1.3
SRP54YPR088C IES6P32617 166 aa6.92□□□□□ -1.3
SRP54YPR088C RFC2P40348 353 aa6.92□□□□□ -1.3
SRP54YPR088C PHO23P50947 330 aa6.92□□□□□ -1.3
SRP54YPR088C HOF1Q05080 669 aa6.92□□□□□ -1.3
SRP54YPR088C COA2Q3E823 68 aa6.92□□□□□ -1.3
SRP54YPR088C VPS63O13549 108 aa6.91□□□□□ -1.3
SRP54YPR088C YEA4P40004 342 aa6.91□□□□□ -1.3
SRP54YPR088C YFL015CP43578 164 aa6.91□□□□□ -1.3
SRP54YPR088C NCA3P46955 337 aa6.91□□□□□ -1.3
SRP54YPR088C YJL118WP47022 219 aa6.91□□□□□ -1.3
SRP54YPR088C YMR082CQ04276 118 aa6.91□□□□□ -1.3
SRP54YPR088C IRC25Q07951 179 aa6.91□□□□□ -1.3
SRP54YPR088C YOS1Q3E834 85 aa6.91□□□□□ -1.3
SRP54YPR088C YIL012WP40551 113 aa6.9□□□□□ -1.3
SRP54YPR088C YPL264CQ08980 353 aa6.9□□□□□ -1.3
SRP54YPR088C YHR213W-AQ8TGT4 77 aa6.9□□□□□ -1.3
SRP54YPR088C RPL9AP05738 191 aaKnown RBP6.9□□□□□ -1.31
SRP54YPR088C YIR020CP40575 100 aa6.9□□□□□ -1.31
SRP54YPR088C ARP3P47117 449 aaKnown RBP6.9□□□□□ -1.31
SRP54YPR088C RPL9BP51401 191 aaKnown RBP6.9□□□□□ -1.31
SRP54YPR088C YGL114WP53134 725 aa6.9□□□□□ -1.31
SRP54YPR088C FSH2Q05015 223 aa6.9□□□□□ -1.31
SRP54YPR088C ARR2Q06597 130 aa6.9□□□□□ -1.31
SRP54YPR088C AGC1Q12482 902 aa6.9□□□□□ -1.31
SRP54YPR088C EMC5P40540 141 aa6.89□□□□□ -1.31
SRP54YPR088C YGR050CP53231 118 aa6.89□□□□□ -1.31
SRP54YPR088C ZRC1P20107 442 aa6.88□□□□□ -1.31
SRP54YPR088C CBT1P36038 271 aaPredicted RBP6.88□□□□□ -1.31
SRP54YPR088C ADH5P38113 351 aaKnown RBP6.88□□□□□ -1.31
SRP54YPR088C ALG14P38242 237 aa6.88□□□□□ -1.31
SRP54YPR088C PDR17P53844 350 aa6.88□□□□□ -1.31
SRP54YPR088C APJ1P53940 528 aa6.88□□□□□ -1.31
SRP54YPR088C MRPS17Q03246 237 aaPredicted RBP6.88□□□□□ -1.31
SRP54YPR088C HBN1Q96VH4 193 aa6.88□□□□□ -1.31
SRP54YPR088C ERG25P53045 309 aa6.87□□□□□ -1.31
SRP54YPR088C YCL001W-AP87012 153 aa6.87□□□□□ -1.31
SRP54YPR088C RDL1Q12305 139 aaKnown RBP6.87□□□□□ -1.31
SRP54YPR088C Q0297Q9ZZV8 51 aa6.87□□□□□ -1.31
SRP54YPR088C YDR157WA0A023PZE8 133 aa6.87□□□□□ -1.31
SRP54YPR088C YCR025CP25352 136 aa6.87□□□□□ -1.31
SRP54YPR088C SUT1P53032 299 aaKnown RBP6.87□□□□□ -1.31
SRP54YPR088C YNR066CP53752 436 aa6.87□□□□□ -1.31
SRP54YPR088C ISU1Q03020 165 aa6.87□□□□□ -1.31
SRP54YPR088C ODC1Q03028 310 aa6.87□□□□□ -1.31
SRP54YPR088C CSI2Q08054 341 aa6.87□□□□□ -1.31
SRP54YPR088C PRR2Q12310 699 aa6.87□□□□□ -1.31
SRP54YPR088C YGL258W-AQ3E740 77 aa6.87□□□□□ -1.31
SRP54YPR088C SIP1P32578 815 aa6.86□□□□□ -1.31
SRP54YPR088C UPS2P35200 230 aa6.86□□□□□ -1.31
SRP54YPR088C PMU1P36069 295 aa6.86□□□□□ -1.31
SRP54YPR088C SHG1P38337 142 aa6.86□□□□□ -1.31
SRP54YPR088C RTC3P38804 111 aaPredicted RBP6.86□□□□□ -1.31
SRP54YPR088C ABM1P47146 123 aa6.86□□□□□ -1.31
SRP54YPR088C SNN1P48232 102 aa6.86□□□□□ -1.31
SRP54YPR088C ADH6Q04894 360 aaKnown RBP6.86□□□□□ -1.31
SRP54YPR088C DCS1Q06151 350 aa6.86□□□□□ -1.31
SRP54YPR088C YPR071WQ12346 211 aa6.86□□□□□ -1.31
SRP54YPR088C NUM1Q00402 2748 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms