RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C GPM2Q12008 311 aa0.33□□□□□ -2.36
NIP100YPL174C SSN2P38931 1420 aa0.32□□□□□ -2.36
NIP100YPL174C YLR236CA0A023PZG4 107 aa0.32□□□□□ -2.36
NIP100YPL174C REP2P03872 296 aa0.32□□□□□ -2.36
NIP100YPL174C CUS2P53830 285 aaPredicted RBP0.32□□□□□ -2.36
NIP100YPL174C PET117Q02771 107 aa0.32□□□□□ -2.36
NIP100YPL174C IML1P47170 1584 aa0.32□□□□□ -2.36
NIP100YPL174C CHC1P22137 1653 aaKnown RBP0.32□□□□□ -2.36
NIP100YPL174C KDX1P36005 433 aa0.32□□□□□ -2.36
NIP100YPL174C ARO1P08566 1588 aaKnown RBP0.31□□□□□ -2.36
NIP100YPL174C APS1P35181 156 aa0.31□□□□□ -2.36
NIP100YPL174C YBR285WP38354 144 aa0.31□□□□□ -2.36
NIP100YPL174C RRT8Q08219 342 aa0.31□□□□□ -2.36
NIP100YPL174C URA5P13298 226 aaKnown RBP0.31□□□□□ -2.36
NIP100YPL174C IRC22P40006 225 aa0.31□□□□□ -2.36
NIP100YPL174C YDR274CP87283 123 aa0.31□□□□□ -2.36
NIP100YPL174C CKS1P20486 150 aaKnown RBP0.3□□□□□ -2.36
NIP100YPL174C BET1P22804 142 aa0.3□□□□□ -2.36
NIP100YPL174C MGM101P32787 269 aaKnown RBP0.3□□□□□ -2.36
NIP100YPL174C POP3P53833 195 aaPredicted RBP0.3□□□□□ -2.36
NIP100YPL174C FSF1Q12029 327 aaKnown RBP0.3□□□□□ -2.36
NIP100YPL174C HYR1P40581 163 aaKnown RBP0.3□□□□□ -2.36
NIP100YPL174C NUP84P52891 726 aa0.3□□□□□ -2.36
NIP100YPL174C YPR174CQ06616 221 aaPredicted RBP0.3□□□□□ -2.36
NIP100YPL174C MDM32Q12171 622 aa0.3□□□□□ -2.36
NIP100YPL174C FAR7P43592 221 aa0.29□□□□□ -2.36
NIP100YPL174C YHR214C-EQ8TGK0 99 aa0.29□□□□□ -2.36
NIP100YPL174C FMP27Q06179 2628 aa0.29□□□□□ -2.36
NIP100YPL174C RPA190P10964 1664 aaKnown RBP0.29□□□□□ -2.36
NIP100YPL174C KSS1P14681 368 aa0.29□□□□□ -2.36
NIP100YPL174C SEC11P15367 167 aa0.29□□□□□ -2.36
NIP100YPL174C RPL24BP24000 155 aaKnown RBP0.29□□□□□ -2.36
NIP100YPL174C YCL042WP25572 119 aa0.29□□□□□ -2.36
NIP100YPL174C VPS21P36017 210 aaKnown RBP0.29□□□□□ -2.36
NIP100YPL174C DID2P69771 204 aa0.29□□□□□ -2.36
NIP100YPL174C ATG31Q12421 196 aa0.29□□□□□ -2.36
NIP100YPL174C HIR3P47171 1648 aa0.29□□□□□ -2.36
NIP100YPL174C MATALPHA1P0CY06 175 aa0.28□□□□□ -2.36
NIP100YPL174C HMLALPHA1P0CY07 175 aa0.28□□□□□ -2.36
NIP100YPL174C NTF2P33331 125 aaKnown RBP0.28□□□□□ -2.36
NIP100YPL174C MIC12P38341 106 aa0.28□□□□□ -2.36
NIP100YPL174C YPL073CP40323 161 aa0.28□□□□□ -2.36
NIP100YPL174C LIA1P47120 325 aaKnown RBP0.28□□□□□ -2.36
NIP100YPL174C YJR149WP47177 404 aa0.28□□□□□ -2.36
NIP100YPL174C ALG13P53178 202 aa0.28□□□□□ -2.36
NIP100YPL174C CWC27Q02770 301 aa0.28□□□□□ -2.36
NIP100YPL174C YPL229WQ99395 206 aa0.28□□□□□ -2.36
NIP100YPL174C LAP3Q01532 483 aaKnown RBP RIP-Chip data0.28□□□□□ -2.37not detected
NIP100YPL174C MCP1Q12106 302 aa0.28□□□□□ -2.37
NIP100YPL174C RPL25P04456 142 aaKnown RBP0.27□□□□□ -2.37
NIP100YPL174C PPA2P28239 310 aa0.27□□□□□ -2.37
NIP100YPL174C AIM2P39721 246 aa0.27□□□□□ -2.37
NIP100YPL174C MIC26P50087 233 aa0.27□□□□□ -2.37
NIP100YPL174C DOP1Q03921 1698 aa0.27□□□□□ -2.37
NIP100YPL174C MMS1Q06211 1407 aa0.27□□□□□ -2.37
NIP100YPL174C YCF1P39109 1515 aaKnown RBP0.27□□□□□ -2.37
NIP100YPL174C UTP20P35194 2493 aaKnown RBP0.27□□□□□ -2.37
NIP100YPL174C BRR6P53062 197 aa0.27□□□□□ -2.37
NIP100YPL174C RRN5Q02983 363 aa0.27□□□□□ -2.37
NIP100YPL174C YRA1Q12159 226 aaKnown RBP0.27□□□□□ -2.37
NIP100YPL174C JLP1Q12358 412 aa0.27□□□□□ -2.37
NIP100YPL174C IKI3Q06706 1349 aaKnown RBP0.27□□□□□ -2.37
NIP100YPL174C DNF3Q12674 1656 aa0.27□□□□□ -2.37
NIP100YPL174C GEA2P39993 1459 aaKnown RBP0.26□□□□□ -2.37
NIP100YPL174C TY1B-DR4Q07793 1604 aa0.26□□□□□ -2.37
NIP100YPL174C MDM35O60200 86 aa0.26□□□□□ -2.37
NIP100YPL174C SPT3P06844 337 aa0.26□□□□□ -2.37
NIP100YPL174C YMR31P19955 123 aa0.26□□□□□ -2.37
NIP100YPL174C FLX1P40464 311 aa0.26□□□□□ -2.37
NIP100YPL174C YAE1P47118 141 aaPredicted RBP0.26□□□□□ -2.37
NIP100YPL174C GET1P53192 235 aa0.26□□□□□ -2.37
NIP100YPL174C YMR226CQ05016 267 aaKnown RBP0.26□□□□□ -2.37
NIP100YPL174C AQY2P0CD90 149 aa0.26□□□□□ -2.37
NIP100YPL174C SHE2P36068 246 aaKnown RBP RIP-Chip data0.26□□□□□ -2.37not detected
NIP100YPL174C UTP30P36144 274 aaKnown RBP0.26□□□□□ -2.37
NIP100YPL174C TRM5P38793 499 aa0.26□□□□□ -2.37
NIP100YPL174C YFR032C-BQ8TGU2 87 aa0.26□□□□□ -2.37
NIP100YPL174C SLH1P53327 1967 aaKnown RBP0.26□□□□□ -2.37
NIP100YPL174C GCN3P14741 305 aa0.25□□□□□ -2.37
NIP100YPL174C UPS3Q04006 179 aa0.25□□□□□ -2.37
NIP100YPL174C SMC4Q12267 1418 aa0.25□□□□□ -2.37
NIP100YPL174C RHO1P06780 209 aaKnown RBP0.25□□□□□ -2.37
NIP100YPL174C VMA6P32366 345 aaKnown RBP0.25□□□□□ -2.37
NIP100YPL174C YMR295CQ03559 197 aa0.25□□□□□ -2.37
NIP100YPL174C YSP2Q06681 1438 aa0.25□□□□□ -2.37
NIP100YPL174C CDC25P04821 1589 aa0.24□□□□□ -2.37
NIP100YPL174C BPT1P14772 1559 aa0.24□□□□□ -2.37
NIP100YPL174C ATG2P53855 1592 aa0.24□□□□□ -2.37
NIP100YPL174C THP2O13539 261 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C NHP6BP11633 99 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C YCR090CP25654 182 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C PRX1P34227 261 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C YHL042WP38729 150 aa0.24□□□□□ -2.37
NIP100YPL174C YFL065CP43539 102 aa0.24□□□□□ -2.37
NIP100YPL174C ADO1P47143 340 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C SRL4Q03085 281 aa0.24□□□□□ -2.37
NIP100YPL174C RRP36Q12481 300 aaPredicted RBP0.24□□□□□ -2.37
NIP100YPL174C SEY1Q99287 776 aa0.24□□□□□ -2.37
NIP100YPL174C RPL27AP0C2H6 136 aaKnown RBP0.24□□□□□ -2.37
NIP100YPL174C YBR121C-AP0C5L4 52 aa0.24□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms