RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YNG1Q08465 219 aa3.37□□□□□ -1.87
SNF8YPL002C FCY22Q12119 530 aa3.37□□□□□ -1.87
SNF8YPL002C PAA1Q12447 191 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C ERG27Q12452 347 aaKnown RBP3.37□□□□□ -1.87
SNF8YPL002C UBA3Q99344 299 aa3.37□□□□□ -1.87
SNF8YPL002C PET54P10834 293 aa3.36□□□□□ -1.87
SNF8YPL002C ATP10P18496 279 aa3.36□□□□□ -1.87
SNF8YPL002C IDP1P21954 428 aaKnown RBP3.36□□□□□ -1.87
SNF8YPL002C RNA14P25298 677 aaKnown RBP3.36□□□□□ -1.87
SNF8YPL002C YPS1P32329 569 aa3.36□□□□□ -1.87
SNF8YPL002C TFC1P32367 649 aa3.36□□□□□ -1.87
SNF8YPL002C ECM25P32525 599 aa3.36□□□□□ -1.87
SNF8YPL002C IES6P32617 166 aa3.36□□□□□ -1.87
SNF8YPL002C IST2P38250 946 aa3.36□□□□□ -1.87
SNF8YPL002C MIC12P38341 106 aa3.36□□□□□ -1.87
SNF8YPL002C PHO90P39535 881 aa3.36□□□□□ -1.87
SNF8YPL002C OXA1P39952 402 aa3.36□□□□□ -1.87
SNF8YPL002C COX15P40086 486 aa3.36□□□□□ -1.87
SNF8YPL002C YNL194CP40169 301 aa3.36□□□□□ -1.87
SNF8YPL002C VHS2P40463 436 aa3.36□□□□□ -1.87
SNF8YPL002C SER2P42941 309 aa3.36□□□□□ -1.87
SNF8YPL002C CTK2P46962 323 aa3.36□□□□□ -1.87
SNF8YPL002C MRX5P47007 382 aa3.36□□□□□ -1.87
SNF8YPL002C LSM8P47093 109 aaKnown RBP3.36□□□□□ -1.87
SNF8YPL002C PHB2P50085 310 aa3.36□□□□□ -1.87
SNF8YPL002C SYF2P53277 215 aaPredicted RBP3.36□□□□□ -1.87
SNF8YPL002C APJ1P53940 528 aa3.36□□□□□ -1.87
SNF8YPL002C SNO1Q03144 224 aa3.36□□□□□ -1.87
SNF8YPL002C DIG2Q03373 323 aaKnown RBP3.36□□□□□ -1.87
SNF8YPL002C MSS11Q03825 758 aa3.36□□□□□ -1.87
SNF8YPL002C SEC13Q04491 297 aaKnown RBP3.36□□□□□ -1.87
SNF8YPL002C MHR1Q06630 226 aa3.36□□□□□ -1.87
SNF8YPL002C YLR361C-AQ3E795 98 aa3.36□□□□□ -1.87
SNF8YPL002C RAD52P06778 471 aaKnown RBP3.35□□□□□ -1.87
SNF8YPL002C PUT1P09368 476 aa3.35□□□□□ -1.87
SNF8YPL002C URA6P15700 204 aa3.35□□□□□ -1.87
SNF8YPL002C YMR31P19955 123 aa3.35□□□□□ -1.87
SNF8YPL002C YCR100CP25606 316 aa3.35□□□□□ -1.87
SNF8YPL002C RFA3P26755 122 aaKnown RBP3.35□□□□□ -1.87
SNF8YPL002C MIG1P27705 504 aa3.35□□□□□ -1.87
SNF8YPL002C ACH1P32316 526 aa3.35□□□□□ -1.87
SNF8YPL002C TCM62P38228 572 aaKnown RBP3.35□□□□□ -1.87
SNF8YPL002C YHR122WP38829 231 aa3.35□□□□□ -1.87
SNF8YPL002C IKI1P38874 309 aa3.35□□□□□ -1.87
SNF8YPL002C SWP82P43554 623 aa3.35□□□□□ -1.87
SNF8YPL002C YFR057WP43625 151 aa3.35□□□□□ -1.87
SNF8YPL002C TRS85P46944 698 aa3.35□□□□□ -1.87
SNF8YPL002C BAT2P47176 376 aaKnown RBP3.35□□□□□ -1.87
SNF8YPL002C UFD1P53044 361 aa3.35□□□□□ -1.87
SNF8YPL002C YGR168CP53293 376 aa3.35□□□□□ -1.87
SNF8YPL002C OCA2P53949 197 aa3.35□□□□□ -1.87
SNF8YPL002C COG5P53951 403 aa3.35□□□□□ -1.87
SNF8YPL002C STD1Q02794 444 aa3.35□□□□□ -1.87
SNF8YPL002C RNH202Q05635 350 aa3.35□□□□□ -1.87
SNF8YPL002C SSK1Q07084 712 aa3.35□□□□□ -1.87
SNF8YPL002C THP1Q08231 455 aa3.35□□□□□ -1.87
SNF8YPL002C SKI7Q08491 747 aaPredicted RBP3.35□□□□□ -1.87
SNF8YPL002C YDL009CQ12210 107 aa3.35□□□□□ -1.87
SNF8YPL002C DCN1Q12395 269 aa3.35□□□□□ -1.87
SNF8YPL002C YDL199CQ12407 687 aa3.35□□□□□ -1.87
SNF8YPL002C MRX4Q12467 430 aa3.35□□□□□ -1.87
SNF8YPL002C ADH2P00331 348 aaKnown RBP3.34□□□□□ -1.87
SNF8YPL002C RPS28BP0C0X0 67 aaKnown RBP3.34□□□□□ -1.87
SNF8YPL002C NAM2P11325 894 aa3.34□□□□□ -1.87
SNF8YPL002C PRE7P23724 241 aaKnown RBP3.34□□□□□ -1.87
SNF8YPL002C AVT5P38176 459 aa3.34□□□□□ -1.87
SNF8YPL002C PRS2P38620 318 aaKnown RBP3.34□□□□□ -1.87
SNF8YPL002C YGR210CP42942 411 aa3.34□□□□□ -1.87
SNF8YPL002C GPI14P47088 403 aaKnown RBP3.34□□□□□ -1.87
SNF8YPL002C JAC1P53193 184 aa3.34□□□□□ -1.87
SNF8YPL002C RSM23Q01163 450 aa3.34□□□□□ -1.87
SNF8YPL002C YKR005CQ02203 525 aa3.34□□□□□ -1.87
SNF8YPL002C ABF2Q02486 183 aa3.34□□□□□ -1.87
SNF8YPL002C SDH7Q04401 133 aa3.34□□□□□ -1.87
SNF8YPL002C HSP31Q04432 237 aa3.34□□□□□ -1.87
SNF8YPL002C MRPL35Q06678 367 aa3.34□□□□□ -1.87
SNF8YPL002C SYC1Q08553 188 aaPredicted RBP3.34□□□□□ -1.87
SNF8YPL002C PPT2Q12036 173 aa3.34□□□□□ -1.87
SNF8YPL002C RPS28AQ3E7X9 67 aaPredicted RBP3.34□□□□□ -1.87
SNF8YPL002C YDR157WA0A023PZE8 133 aa3.33□□□□□ -1.88
SNF8YPL002C COX5BP00425 151 aa3.33□□□□□ -1.88
SNF8YPL002C GDH1P07262 454 aaKnown RBP3.33□□□□□ -1.88
SNF8YPL002C YOL162WP0CF19 215 aa3.33□□□□□ -1.88
SNF8YPL002C MRS3P10566 314 aa3.33□□□□□ -1.88
SNF8YPL002C PUT3P25502 979 aaPredicted RBP3.33□□□□□ -1.88
SNF8YPL002C REC114P32841 428 aa3.33□□□□□ -1.88
SNF8YPL002C YCR041WP37265 110 aa3.33□□□□□ -1.88
SNF8YPL002C YBR241CP38142 488 aa3.33□□□□□ -1.88
SNF8YPL002C NVJ1P38881 321 aa3.33□□□□□ -1.88
SNF8YPL002C CIN2P46670 268 aa3.33□□□□□ -1.88
SNF8YPL002C YGL101WP53144 215 aa3.33□□□□□ -1.88
SNF8YPL002C YOP1Q12402 180 aa3.33□□□□□ -1.88
SNF8YPL002C YDL007C-AQ2V2Q0 85 aa3.33□□□□□ -1.88
SNF8YPL002C MHF2Q3E829 80 aa3.33□□□□□ -1.88
SNF8YPL002C CDC7P06243 507 aa3.32□□□□□ -1.88
SNF8YPL002C HXT2P23585 541 aa3.32□□□□□ -1.88
SNF8YPL002C CNB1P25296 175 aa3.32□□□□□ -1.88
SNF8YPL002C SUA7P29055 345 aaPredicted RBP3.32□□□□□ -1.88
SNF8YPL002C YBR063CP38083 404 aa3.32□□□□□ -1.88
SNF8YPL002C RTC2P38279 296 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms