RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W ATG5Q12380 294 aa3.2□□□□□ -1.9
ROD1YOR018W DGK1Q12382 290 aa3.2□□□□□ -1.9
ROD1YOR018W FMP16Q12497 93 aa3.2□□□□□ -1.9
ROD1YOR018W RPS23AP0CX29 145 aaKnown RBP3.19□□□□□ -1.9
ROD1YOR018W RPS23BP0CX30 145 aa3.19□□□□□ -1.9
ROD1YOR018W CPR4P25334 318 aa3.19□□□□□ -1.9
ROD1YOR018W PRS2P38620 318 aaKnown RBP3.19□□□□□ -1.9
ROD1YOR018W YIL012WP40551 113 aa3.19□□□□□ -1.9
ROD1YOR018W YGL117WP53133 265 aa3.19□□□□□ -1.9
ROD1YOR018W CAB5Q03941 241 aa3.19□□□□□ -1.9
ROD1YOR018W RXT3Q07458 294 aa3.19□□□□□ -1.9
ROD1YOR018W YNG1Q08465 219 aa3.19□□□□□ -1.9
ROD1YOR018W SCP1Q08873 200 aa3.19□□□□□ -1.9
ROD1YOR018W AEP3Q12089 606 aa3.19□□□□□ -1.9
ROD1YOR018W BBP1Q12365 385 aa3.19□□□□□ -1.9
ROD1YOR018W YPR108W-AQ3E7B3 70 aa3.19□□□□□ -1.9
ROD1YOR018W CKA1P15790 372 aa3.19□□□□□ -1.9
ROD1YOR018W STF2P16965 84 aa3.19□□□□□ -1.9
ROD1YOR018W YER121WP40076 114 aa3.19□□□□□ -1.9
ROD1YOR018W YMR144WP40214 342 aaKnown RBP3.19□□□□□ -1.9
ROD1YOR018W TIM10P87108 93 aa3.19□□□□□ -1.9
ROD1YOR018W EST3Q03096 181 aa3.19□□□□□ -1.9
ROD1YOR018W YFH1Q07540 174 aa3.19□□□□□ -1.9
ROD1YOR018W GRC3Q07845 632 aa3.19□□□□□ -1.9
ROD1YOR018W USV1Q12132 391 aa3.19□□□□□ -1.9
ROD1YOR018W VAM3Q12241 283 aa3.19□□□□□ -1.9
ROD1YOR018W YLR365WQ7LIF2 110 aa3.19□□□□□ -1.9
ROD1YOR018W ATG40Q99325 256 aa3.19□□□□□ -1.9
ROD1YOR018W RPL6BP05739 176 aaKnown RBP3.18□□□□□ -1.9
ROD1YOR018W PHM8P40025 321 aa3.18□□□□□ -1.9
ROD1YOR018W LSM4P40070 187 aaKnown RBP3.18□□□□□ -1.9
ROD1YOR018W YNL234WP53857 426 aa3.18□□□□□ -1.9
ROD1YOR018W ERV25P54837 211 aaKnown RBP3.18□□□□□ -1.9
ROD1YOR018W YDL086WQ07505 273 aa3.18□□□□□ -1.9
ROD1YOR018W FCY1Q12178 158 aa3.18□□□□□ -1.9
ROD1YOR018W RTR2Q12378 196 aa3.18□□□□□ -1.9
ROD1YOR018W TFB5Q3E7C1 72 aaPredicted RBP3.18□□□□□ -1.9
ROD1YOR018W COA2Q3E823 68 aa3.18□□□□□ -1.9
ROD1YOR018W IFM1P25038 676 aa3.18□□□□□ -1.9
ROD1YOR018W PDC2P32896 925 aa3.18□□□□□ -1.9
ROD1YOR018W LNP1P38878 278 aa3.18□□□□□ -1.9
ROD1YOR018W POP2P39008 433 aa3.18□□□□□ -1.9
ROD1YOR018W CCS1P40202 249 aaKnown RBP3.18□□□□□ -1.9
ROD1YOR018W YJR012CP47087 207 aa3.18□□□□□ -1.9
ROD1YOR018W SOL1P50278 321 aa3.18□□□□□ -1.9
ROD1YOR018W RPL21AQ02753 160 aaKnown RBP3.18□□□□□ -1.9
ROD1YOR018W HOF1Q05080 669 aa3.18□□□□□ -1.9
ROD1YOR018W MED4Q12343 284 aa3.18□□□□□ -1.9
ROD1YOR018W ATO3Q12359 275 aa3.18□□□□□ -1.9
ROD1YOR018W RPL21BQ12672 160 aaKnown RBP3.18□□□□□ -1.9
ROD1YOR018W QCR2P07257 368 aa3.17□□□□□ -1.9
ROD1YOR018W ELO2P25358 347 aa3.17□□□□□ -1.9
ROD1YOR018W EMP24P32803 203 aaKnown RBP3.17□□□□□ -1.9
ROD1YOR018W FLO10P36170 1169 aa3.17□□□□□ -1.9
ROD1YOR018W NTC20P38302 140 aaPredicted RBP3.17□□□□□ -1.9
ROD1YOR018W PRS3P38689 320 aaKnown RBP3.17□□□□□ -1.9
ROD1YOR018W AGX1P43567 385 aa3.17□□□□□ -1.9
ROD1YOR018W WWM1P43582 211 aaKnown RBP3.17□□□□□ -1.9
ROD1YOR018W DPB4Q04603 196 aaKnown RBP3.17□□□□□ -1.9
ROD1YOR018W ECM18Q04623 453 aa3.17□□□□□ -1.9
ROD1YOR018W YMR254CQ04838 102 aa3.17□□□□□ -1.9
ROD1YOR018W ARR3Q06598 404 aa3.17□□□□□ -1.9
ROD1YOR018W ATP14Q12349 124 aa3.17□□□□□ -1.9
ROD1YOR018W YOS1Q3E834 85 aa3.17□□□□□ -1.9
ROD1YOR018W TRP4P07285 380 aaPredicted RBP3.17□□□□□ -1.9
ROD1YOR018W ECM27P47144 725 aa3.17□□□□□ -1.9
ROD1YOR018W ORM2Q06144 216 aa3.17□□□□□ -1.9
ROD1YOR018W POM34Q12445 299 aa3.17□□□□□ -1.9
ROD1YOR018W YLR146W-AQ2V2P1 62 aa3.17□□□□□ -1.9
ROD1YOR018W FUS3P16892 353 aaKnown RBP3.16□□□□□ -1.9
ROD1YOR018W VMA7P39111 118 aa3.16□□□□□ -1.9
ROD1YOR018W NCA3P46955 337 aa3.16□□□□□ -1.9
ROD1YOR018W YOR292CQ08743 309 aa3.16□□□□□ -1.9
ROD1YOR018W TGS1Q12052 315 aa3.16□□□□□ -1.9
ROD1YOR018W YCT1Q12235 531 aa3.16□□□□□ -1.9
ROD1YOR018W YCR025CP25352 136 aa3.16□□□□□ -1.9
ROD1YOR018W SYG1P40528 902 aa3.16□□□□□ -1.9
ROD1YOR018W UPS1Q05776 175 aa3.16□□□□□ -1.9
ROD1YOR018W ANT1Q06497 328 aa3.16□□□□□ -1.9
ROD1YOR018W YDL009CQ12210 107 aa3.16□□□□□ -1.9
ROD1YOR018W Q0297Q9ZZV8 51 aa3.16□□□□□ -1.9
ROD1YOR018W YML003WP0CF16 290 aa3.15□□□□□ -1.91
ROD1YOR018W MAG1P22134 296 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W DFG10P40526 253 aa3.15□□□□□ -1.91
ROD1YOR018W RPS0BP46654 252 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W RPA34P47006 233 aaPredicted RBP3.15□□□□□ -1.91
ROD1YOR018W GIM3P53900 129 aa3.15□□□□□ -1.91
ROD1YOR018W SMX3P54999 86 aaPredicted RBP3.15□□□□□ -1.91
ROD1YOR018W YDR286CQ05530 114 aa3.15□□□□□ -1.91
ROD1YOR018W RPP2AP05319 106 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W URA5P13298 226 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W FEN2P25621 512 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W YIR020CP40575 100 aa3.15□□□□□ -1.91
ROD1YOR018W IRC24P40580 263 aa3.15□□□□□ -1.91
ROD1YOR018W PNC1P53184 216 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W MSO1P53604 210 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W DID2P69771 204 aa3.15□□□□□ -1.91
ROD1YOR018W GMC1Q04399 608 aa3.15□□□□□ -1.91
ROD1YOR018W TRI1Q05024 226 aa3.15□□□□□ -1.91
ROD1YOR018W LIP2Q06005 328 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms