RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W URK1P27515 501 aa1.56□□□□□ -2.16
RTP1YMR185W ERV1P27882 189 aa1.56□□□□□ -2.16
RTP1YMR185W YUH1P35127 236 aa1.56□□□□□ -2.16
RTP1YMR185W YKL075CP36083 450 aa1.56□□□□□ -2.16
RTP1YMR185W SWD2P36104 329 aaPredicted RBP1.56□□□□□ -2.16
RTP1YMR185W EHT1P38295 451 aa1.56□□□□□ -2.16
RTP1YMR185W NSA2P40078 261 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W FAF1P40546 346 aaPredicted RBP1.56□□□□□ -2.16
RTP1YMR185W RIB4P50861 169 aaPredicted RBP1.56□□□□□ -2.16
RTP1YMR185W TEX1P53851 422 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W AQR1P53943 586 aa1.56□□□□□ -2.16
RTP1YMR185W YLR460CP54007 376 aa1.56□□□□□ -2.16
RTP1YMR185W APS2Q00381 147 aa1.56□□□□□ -2.16
RTP1YMR185W EKI1Q03764 534 aa1.56□□□□□ -2.16
RTP1YMR185W STP3Q05937 343 aa1.56□□□□□ -2.16
RTP1YMR185W PRP11Q07350 266 aaPredicted RBP1.56□□□□□ -2.16
RTP1YMR185W IRC19Q07843 230 aa1.56□□□□□ -2.16
RTP1YMR185W OPI10Q08202 246 aa1.56□□□□□ -2.16
RTP1YMR185W FCY22Q12119 530 aa1.56□□□□□ -2.16
RTP1YMR185W YPR071WQ12346 211 aa1.56□□□□□ -2.16
RTP1YMR185W HMS1Q12398 434 aa1.56□□□□□ -2.16
RTP1YMR185W PAR32Q12515 295 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W YPR108W-AQ3E7B3 70 aa1.56□□□□□ -2.16
RTP1YMR185W YIL134C-AQ45U18 67 aa1.56□□□□□ -2.16
RTP1YMR185W NAG1Q8TGN9 163 aa1.56□□□□□ -2.16
RTP1YMR185W RPL1AP0CX43 217 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W RPL1BP0CX44 217 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W COQ3P27680 312 aa1.56□□□□□ -2.16
RTP1YMR185W PPA2P28239 310 aa1.56□□□□□ -2.16
RTP1YMR185W DEG1P31115 442 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W FYV4P38783 130 aaPredicted RBP1.56□□□□□ -2.16
RTP1YMR185W FLO5P38894 1075 aa1.56□□□□□ -2.16
RTP1YMR185W GAT2P40209 560 aa1.56□□□□□ -2.16
RTP1YMR185W CYB5P40312 120 aa1.56□□□□□ -2.16
RTP1YMR185W YJR011CP47086 261 aaPredicted RBP1.56□□□□□ -2.16
RTP1YMR185W YGR149WP48236 432 aa1.56□□□□□ -2.16
RTP1YMR185W RCE1Q03530 315 aa1.56□□□□□ -2.16
RTP1YMR185W PAL1Q05518 499 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W YOR015WQ12169 119 aa1.56□□□□□ -2.16
RTP1YMR185W ERG27Q12452 347 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W RPS22BQ3E7Y3 130 aaKnown RBP1.56□□□□□ -2.16
RTP1YMR185W TDH3P00359 332 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
RTP1YMR185W CDC36P06100 191 aaPredicted RBP1.55□□□□□ -2.16
RTP1YMR185W GDH1P07262 454 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W RPS25BP0C0T4 108 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W PDX1P16451 410 aa1.55□□□□□ -2.16
RTP1YMR185W KRR1P25586 316 aaPredicted RBP1.55□□□□□ -2.16
RTP1YMR185W OCH1P31755 480 aa1.55□□□□□ -2.16
RTP1YMR185W TCA17P32613 152 aa1.55□□□□□ -2.16
RTP1YMR185W RPB7P34087 171 aa1.55□□□□□ -2.16
RTP1YMR185W PAU16P35994 123 aa1.55□□□□□ -2.16
RTP1YMR185W ICS2P38284 255 aa1.55□□□□□ -2.16
RTP1YMR185W NAS2P40555 220 aa1.55□□□□□ -2.16
RTP1YMR185W GLC8P41818 229 aa1.55□□□□□ -2.16
RTP1YMR185W ZIM17P42844 174 aa1.55□□□□□ -2.16
RTP1YMR185W CTK2P46962 323 aa1.55□□□□□ -2.16
RTP1YMR185W LST7P53237 242 aa1.55□□□□□ -2.16
RTP1YMR185W YGR151CP53287 111 aa1.55□□□□□ -2.16
RTP1YMR185W ALG12P53730 551 aa1.55□□□□□ -2.16
RTP1YMR185W YNR064CP53750 290 aa1.55□□□□□ -2.16
RTP1YMR185W PDR16P53860 351 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W RSM23Q01163 450 aa1.55□□□□□ -2.16
RTP1YMR185W YMR166CQ03829 368 aa1.55□□□□□ -2.16
RTP1YMR185W YMR090WQ04304 227 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W SEN15Q04675 128 aa1.55□□□□□ -2.16
RTP1YMR185W MCH1Q07376 486 aa1.55□□□□□ -2.16
RTP1YMR185W PAM18Q07914 168 aa1.55□□□□□ -2.16
RTP1YMR185W RFU1Q08003 200 aa1.55□□□□□ -2.16
RTP1YMR185W RPS25AQ3E792 108 aaPredicted RBP1.55□□□□□ -2.16
RTP1YMR185W CYR1P08678 2026 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W SPT15P13393 240 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W MDM10P18409 493 aa1.55□□□□□ -2.16
RTP1YMR185W SPO7P18410 259 aa1.55□□□□□ -2.16
RTP1YMR185W STE18P18852 110 aa1.55□□□□□ -2.16
RTP1YMR185W GLC7P32598 312 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W REC114P32841 428 aa1.55□□□□□ -2.16
RTP1YMR185W UPS2P35200 230 aa1.55□□□□□ -2.16
RTP1YMR185W CUE1P38428 203 aa1.55□□□□□ -2.16
RTP1YMR185W RTC3P38804 111 aaPredicted RBP1.55□□□□□ -2.16
RTP1YMR185W YHR180WP38868 163 aa1.55□□□□□ -2.16
RTP1YMR185W RPB11P38902 120 aa1.55□□□□□ -2.16
RTP1YMR185W LYS1P38998 373 aaRIP-Chip data1.55□□□□□ -2.16not detected
RTP1YMR185W YJL193WP39542 402 aa1.55□□□□□ -2.16
RTP1YMR185W YEL057CP39983 233 aa1.55□□□□□ -2.16
RTP1YMR185W YGR269WP40326 108 aa1.55□□□□□ -2.16
RTP1YMR185W YIL152WP40455 235 aa1.55□□□□□ -2.16
RTP1YMR185W AGE2P40529 298 aa1.55□□□□□ -2.16
RTP1YMR185W CFD1P40558 293 aa1.55□□□□□ -2.16
RTP1YMR185W LOC1P43586 204 aaPredicted RBP1.55□□□□□ -2.16
RTP1YMR185W TTI2P47168 421 aa1.55□□□□□ -2.16
RTP1YMR185W HSV2P50079 448 aaPredicted RBP1.55□□□□□ -2.16
RTP1YMR185W YNR048WP53740 393 aa1.55□□□□□ -2.16
RTP1YMR185W PDR17P53844 350 aa1.55□□□□□ -2.16
RTP1YMR185W DIG2Q03373 323 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W NDE2Q07500 545 aa1.55□□□□□ -2.16
RTP1YMR185W HRD1Q08109 551 aa1.55□□□□□ -2.16
RTP1YMR185W YOR292CQ08743 309 aa1.55□□□□□ -2.16
RTP1YMR185W USB1Q12208 290 aaKnown RBP1.55□□□□□ -2.16
RTP1YMR185W YPS3Q12303 508 aa1.55□□□□□ -2.16
RTP1YMR185W FMP49A0A023PZB3 126 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms