RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C UPS2P35200 230 aa9.58□□□□□ -0.88
SPT8YLR055C ERG27Q12452 347 aaKnown RBP9.58□□□□□ -0.88
SPT8YLR055C COA6Q3E846 104 aa9.58□□□□□ -0.88
SPT8YLR055C CDC36P06100 191 aaPredicted RBP9.57□□□□□ -0.88
SPT8YLR055C MAK32P23060 363 aa9.57□□□□□ -0.88
SPT8YLR055C SCO1P23833 295 aa9.57□□□□□ -0.88
SPT8YLR055C VMA3P25515 160 aa9.57□□□□□ -0.88
SPT8YLR055C YBR096WP38256 230 aa9.57□□□□□ -0.88
SPT8YLR055C POP2P39008 433 aa9.57□□□□□ -0.88
SPT8YLR055C MID1P41821 548 aa9.57□□□□□ -0.88
SPT8YLR055C CTK2P46962 323 aa9.57□□□□□ -0.88
SPT8YLR055C RPA34P47006 233 aaPredicted RBP9.57□□□□□ -0.88
SPT8YLR055C YGL260WP53056 76 aa9.57□□□□□ -0.88
SPT8YLR055C NSA1P53136 463 aaPredicted RBP9.57□□□□□ -0.88
SPT8YLR055C HCH1P53834 153 aa9.57□□□□□ -0.88
SPT8YLR055C RAX2Q12465 1220 aa9.57□□□□□ -0.88
SPT8YLR055C HUT1Q12520 339 aa9.57□□□□□ -0.88
SPT8YLR055C YNR034W-AQ3E841 98 aa9.57□□□□□ -0.88
SPT8YLR055C PAU1P0CE88 120 aa9.56□□□□□ -0.88
SPT8YLR055C PAU14P0CE89 120 aa9.56□□□□□ -0.88
SPT8YLR055C PAU6P0CE90 120 aa9.56□□□□□ -0.88
SPT8YLR055C PAU18P0CE91 120 aa9.56□□□□□ -0.88
SPT8YLR055C PAU8P0CE92 120 aa9.56□□□□□ -0.88
SPT8YLR055C PAU11P0CE93 120 aa9.56□□□□□ -0.88
SPT8YLR055C YCR025CP25352 136 aa9.56□□□□□ -0.88
SPT8YLR055C AFR1P33304 620 aa9.56□□□□□ -0.88
SPT8YLR055C PAU13P38725 120 aa9.56□□□□□ -0.88
SPT8YLR055C PAU5P43575 122 aa9.56□□□□□ -0.88
SPT8YLR055C PAU10Q03050 120 aa9.56□□□□□ -0.88
SPT8YLR055C TMA10Q06177 86 aa9.56□□□□□ -0.88
SPT8YLR055C PAU20Q08322 120 aa9.56□□□□□ -0.88
SPT8YLR055C PRR2Q12310 699 aa9.56□□□□□ -0.88
SPT8YLR055C PAU9Q3E770 120 aa9.56□□□□□ -0.88
SPT8YLR055C CDC39P25655 2108 aaKnown RBP9.56□□□□□ -0.88
SPT8YLR055C RPL7AP05737 244 aaKnown RBP9.56□□□□□ -0.88
SPT8YLR055C ERG8P24521 451 aa9.56□□□□□ -0.88
SPT8YLR055C CDC50P25656 391 aa9.56□□□□□ -0.88
SPT8YLR055C EHD3P28817 500 aa9.56□□□□□ -0.88
SPT8YLR055C YND1P40009 630 aa9.56□□□□□ -0.88
SPT8YLR055C RTS2P40962 232 aa9.56□□□□□ -0.88
SPT8YLR055C ECO1P43605 281 aa9.56□□□□□ -0.88
SPT8YLR055C PGU1P47180 361 aa9.56□□□□□ -0.88
SPT8YLR055C GIS1Q03833 894 aa9.56□□□□□ -0.88
SPT8YLR055C ATX2Q12067 313 aa9.56□□□□□ -0.88
SPT8YLR055C RPL7BQ12213 244 aaKnown RBP9.56□□□□□ -0.88
SPT8YLR055C YLR365WQ7LIF2 110 aa9.56□□□□□ -0.88
SPT8YLR055C BLM10P43583 2143 aa9.55□□□□□ -0.88
SPT8YLR055C YAL064W-BO13512 126 aa9.55□□□□□ -0.88
SPT8YLR055C SPO13P23624 291 aa9.55□□□□□ -0.88
SPT8YLR055C OCH1P31755 480 aa9.55□□□□□ -0.88
SPT8YLR055C MOH1P38191 138 aa9.55□□□□□ -0.88
SPT8YLR055C MIX14Q04341 121 aa9.55□□□□□ -0.88
SPT8YLR055C HRI1Q05905 244 aaKnown RBP9.55□□□□□ -0.88
SPT8YLR055C BGL2P15703 313 aaKnown RBP9.54□□□□□ -0.88
SPT8YLR055C ATG4P53867 494 aa9.54□□□□□ -0.88
SPT8YLR055C TSA2Q04120 196 aa9.54□□□□□ -0.88
SPT8YLR055C RDL2Q08742 149 aaKnown RBP9.54□□□□□ -0.88
SPT8YLR055C ATG5Q12380 294 aa9.54□□□□□ -0.88
SPT8YLR055C YHR214C-EQ8TGK0 99 aa9.54□□□□□ -0.88
SPT8YLR055C YBR056W-AI2HB52 66 aa9.54□□□□□ -0.88
SPT8YLR055C CDC28P00546 298 aaKnown RBP9.54□□□□□ -0.88
SPT8YLR055C NHP6AP11632 93 aaKnown RBP9.54□□□□□ -0.88
SPT8YLR055C MDH2P22133 377 aa9.54□□□□□ -0.88
SPT8YLR055C MRPL11P36521 249 aaPredicted RBP9.54□□□□□ -0.88
SPT8YLR055C PIG2P40187 538 aa9.54□□□□□ -0.88
SPT8YLR055C OST3P48439 350 aa9.54□□□□□ -0.88
SPT8YLR055C HNT3Q08702 217 aa9.54□□□□□ -0.88
SPT8YLR055C LAS17Q12446 633 aa9.54□□□□□ -0.88
SPT8YLR055C YHR214C-DP0CX93 97 aa9.53□□□□□ -0.88
SPT8YLR055C AHT1P29589 182 aa9.53□□□□□ -0.88
SPT8YLR055C YKR073CP36153 106 aa9.53□□□□□ -0.88
SPT8YLR055C HSP10P38910 106 aa9.53□□□□□ -0.88
SPT8YLR055C NSA2P40078 261 aaKnown RBP9.53□□□□□ -0.88
SPT8YLR055C YGR149WP48236 432 aa9.53□□□□□ -0.88
SPT8YLR055C YDC1Q02896 317 aa9.53□□□□□ -0.88
SPT8YLR055C DIG2Q03373 323 aaKnown RBP9.53□□□□□ -0.88
SPT8YLR055C YDR286CQ05530 114 aa9.53□□□□□ -0.88
SPT8YLR055C YOP1Q12402 180 aa9.53□□□□□ -0.88
SPT8YLR055C COX5BP00425 151 aa9.52□□□□□ -0.89
SPT8YLR055C SPO7P18410 259 aa9.52□□□□□ -0.89
SPT8YLR055C PEX4P29340 183 aa9.52□□□□□ -0.89
SPT8YLR055C PAC2P39937 518 aa9.52□□□□□ -0.89
SPT8YLR055C IRC22P40006 225 aa9.52□□□□□ -0.89
SPT8YLR055C YER010CP40011 234 aa9.52□□□□□ -0.89
SPT8YLR055C RSM23Q01163 450 aa9.52□□□□□ -0.89
SPT8YLR055C ERV2Q12284 196 aa9.52□□□□□ -0.89
SPT8YLR055C RPL30P14120 105 aaKnown RBP9.52□□□□□ -0.89
SPT8YLR055C RPB10P22139 70 aa9.52□□□□□ -0.89
SPT8YLR055C RTC3P38804 111 aaPredicted RBP9.52□□□□□ -0.89
SPT8YLR055C RPS26AP39938 119 aaKnown RBP9.52□□□□□ -0.89
SPT8YLR055C RPS26BP39939 119 aaKnown RBP9.52□□□□□ -0.89
SPT8YLR055C REE1P40893 198 aa9.52□□□□□ -0.89
SPT8YLR055C ATG27P46989 271 aa9.52□□□□□ -0.89
SPT8YLR055C NIP7Q08962 181 aaKnown RBP9.52□□□□□ -0.89
SPT8YLR055C SWM1Q12379 170 aa9.52□□□□□ -0.89
SPT8YLR055C HUG1Q6Q5K6 68 aa9.52□□□□□ -0.89
SPT8YLR055C YDR157WA0A023PZE8 133 aa9.51□□□□□ -0.89
SPT8YLR055C SPS4P09937 338 aa9.51□□□□□ -0.89
SPT8YLR055C ERV1P27882 189 aa9.51□□□□□ -0.89
SPT8YLR055C RPB7P34087 171 aa9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms