RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C PAU19P0CE85 124 aa3.87□□□□□ -1.79
UBI4YLL039C PAU21P0CE86 164 aa3.87□□□□□ -1.79
UBI4YLL039C PAU22P0CE87 164 aa3.87□□□□□ -1.79
UBI4YLL039C BOS1P25385 244 aa3.87□□□□□ -1.79
UBI4YLL039C PAU3P25610 124 aa3.87□□□□□ -1.79
UBI4YLL039C MRP20P32387 263 aa3.87□□□□□ -1.79
UBI4YLL039C YNK1P36010 153 aaKnown RBP3.87□□□□□ -1.79
UBI4YLL039C PAU24P38155 120 aa3.87□□□□□ -1.79
UBI4YLL039C PUG1P40100 303 aa3.87□□□□□ -1.79
UBI4YLL039C EMC5P40540 141 aa3.87□□□□□ -1.79
UBI4YLL039C PMT6P42934 759 aa3.87□□□□□ -1.79
UBI4YLL039C AAH1P53909 347 aa3.87□□□□□ -1.79
UBI4YLL039C YDR391CQ04170 232 aa3.87□□□□□ -1.79
UBI4YLL039C KEI1Q06346 221 aa3.87□□□□□ -1.79
UBI4YLL039C FIT3Q08907 204 aa3.87□□□□□ -1.79
UBI4YLL039C ATG41Q12048 136 aa3.87□□□□□ -1.79
UBI4YLL039C SGA1P08019 549 aa3.86□□□□□ -1.79
UBI4YLL039C RPS18AP0CX55 146 aaKnown RBP3.86□□□□□ -1.79
UBI4YLL039C RPS18BP0CX56 146 aaPredicted RBP3.86□□□□□ -1.79
UBI4YLL039C HAP3P13434 144 aa3.86□□□□□ -1.79
UBI4YLL039C PMU1P36069 295 aa3.86□□□□□ -1.79
UBI4YLL039C FRM2P37261 193 aa3.86□□□□□ -1.79
UBI4YLL039C FAT1P38225 669 aa3.86□□□□□ -1.79
UBI4YLL039C YBR220CP38318 560 aa3.86□□□□□ -1.79
UBI4YLL039C FLX1P40464 311 aa3.86□□□□□ -1.79
UBI4YLL039C VMA21P41806 77 aa3.86□□□□□ -1.79
UBI4YLL039C PAM16P42949 149 aa3.86□□□□□ -1.79
UBI4YLL039C UFD1P53044 361 aa3.86□□□□□ -1.79
UBI4YLL039C YGL204CP53089 101 aa3.86□□□□□ -1.79
UBI4YLL039C YGL185CP53100 379 aa3.86□□□□□ -1.79
UBI4YLL039C YIP5P53108 310 aa3.86□□□□□ -1.79
UBI4YLL039C YGR017WP53210 297 aa3.86□□□□□ -1.79
UBI4YLL039C MTM1P53320 366 aa3.86□□□□□ -1.79
UBI4YLL039C SAM50P53969 484 aa3.86□□□□□ -1.79
UBI4YLL039C ACT1P60010 375 aaKnown RBP3.86□□□□□ -1.79
UBI4YLL039C RSM23Q01163 450 aa3.86□□□□□ -1.79
UBI4YLL039C DIG2Q03373 323 aaKnown RBP3.86□□□□□ -1.79
UBI4YLL039C UTP15Q04305 513 aaKnown RBP3.86□□□□□ -1.79
UBI4YLL039C HLR1Q04429 423 aa3.86□□□□□ -1.79
UBI4YLL039C AVO2Q04749 426 aa3.86□□□□□ -1.79
UBI4YLL039C YMR252CQ04814 134 aa3.86□□□□□ -1.79
UBI4YLL039C ERP1Q05359 219 aaKnown RBP3.86□□□□□ -1.79
UBI4YLL039C RTT103Q05543 409 aa3.86□□□□□ -1.79
UBI4YLL039C GRC3Q07845 632 aa3.86□□□□□ -1.79
UBI4YLL039C SCP1Q08873 200 aa3.86□□□□□ -1.79
UBI4YLL039C NCE102Q12207 173 aaRIP-Chip data3.86□□□□□ -1.79not detected
UBI4YLL039C RNH203Q12338 110 aa3.86□□□□□ -1.79
UBI4YLL039C UTP20P35194 2493 aaKnown RBP3.86□□□□□ -1.79
UBI4YLL039C CHO1P08456 276 aa3.85□□□□□ -1.79
UBI4YLL039C SPS4P09937 338 aa3.85□□□□□ -1.79
UBI4YLL039C PRE1P22141 198 aaKnown RBP3.85□□□□□ -1.79
UBI4YLL039C TRR1P29509 319 aaKnown RBP3.85□□□□□ -1.79
UBI4YLL039C PAU2P32612 120 aa3.85□□□□□ -1.79
UBI4YLL039C YKL187CP34231 750 aa3.85□□□□□ -1.79
UBI4YLL039C YKL075CP36083 450 aa3.85□□□□□ -1.79
UBI4YLL039C MRPL28P36527 147 aa3.85□□□□□ -1.79
UBI4YLL039C MRPS9P38120 278 aa3.85□□□□□ -1.79
UBI4YLL039C IRC22P40006 225 aa3.85□□□□□ -1.79
UBI4YLL039C GAT2P40209 560 aa3.85□□□□□ -1.79
UBI4YLL039C UBC13P52490 153 aa3.85□□□□□ -1.79
UBI4YLL039C PNC1P53184 216 aaKnown RBP3.85□□□□□ -1.79
UBI4YLL039C YLR152CP54072 576 aa3.85□□□□□ -1.79
UBI4YLL039C HHT1P61830 136 aa3.85□□□□□ -1.79
UBI4YLL039C CYT2Q00873 224 aa3.85□□□□□ -1.79
UBI4YLL039C RUB1Q03919 77 aa3.85□□□□□ -1.79
UBI4YLL039C HNT1Q04344 158 aaKnown RBP3.85□□□□□ -1.79
UBI4YLL039C TGS1Q12052 315 aa3.85□□□□□ -1.79
UBI4YLL039C POM33Q12164 279 aa3.85□□□□□ -1.79
UBI4YLL039C YOP1Q12402 180 aa3.85□□□□□ -1.79
UBI4YLL039C EAF3Q12432 401 aa3.85□□□□□ -1.79
UBI4YLL039C YPR145C-AQ2V2P0 78 aa3.85□□□□□ -1.79
UBI4YLL039C TDH3P00359 332 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79 RIP-Chip
UBI4YLL039C MES1P00958 751 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C SEC22P22214 214 aa3.84□□□□□ -1.79
UBI4YLL039C PET18P25362 215 aa3.84□□□□□ -1.79
UBI4YLL039C PRE4P30657 266 aa3.84□□□□□ -1.79
UBI4YLL039C GSP1P32835 219 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C GSP2P32836 220 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C SRY1P36007 326 aa3.84□□□□□ -1.79
UBI4YLL039C SDS24P38314 527 aa3.84□□□□□ -1.79
UBI4YLL039C YHR122WP38829 231 aa3.84□□□□□ -1.79
UBI4YLL039C WSS1P38838 269 aa3.84□□□□□ -1.79
UBI4YLL039C HSP10P38910 106 aa3.84□□□□□ -1.79
UBI4YLL039C DLS1P40366 167 aa3.84□□□□□ -1.79
UBI4YLL039C SYS1P41544 203 aa3.84□□□□□ -1.79
UBI4YLL039C CTK2P46962 323 aa3.84□□□□□ -1.79
UBI4YLL039C YGR042WP53227 271 aa3.84□□□□□ -1.79
UBI4YLL039C CRZ1P53968 678 aa3.84□□□□□ -1.79
UBI4YLL039C ERV25P54837 211 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C SKO1Q02100 647 aa3.84□□□□□ -1.79
UBI4YLL039C YPL077CQ02831 240 aa3.84□□□□□ -1.79
UBI4YLL039C SNO1Q03144 224 aa3.84□□□□□ -1.79
UBI4YLL039C THI74Q04083 370 aa3.84□□□□□ -1.79
UBI4YLL039C NMA1Q06178 401 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C CTR3Q06686 241 aa3.84□□□□□ -1.79
UBI4YLL039C MRX9Q07349 420 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C RRS1Q08746 203 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C ISA2Q12425 185 aa3.84□□□□□ -1.79
UBI4YLL039C ERG27Q12452 347 aaKnown RBP3.84□□□□□ -1.79
UBI4YLL039C YLR099W-AQ3E798 87 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 69.8 ms