RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YIL002W-AQ3E7Z5 69 aa2.91□□□□□ -1.94
SDS3YIL084C TDH3P00359 332 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
SDS3YIL084C CPT1P17898 393 aa2.9□□□□□ -1.95
SDS3YIL084C RCY1P39531 840 aa2.9□□□□□ -1.95
SDS3YIL084C PFS2P42841 465 aaKnown RBP2.9□□□□□ -1.95
SDS3YIL084C CAX4P53223 239 aa2.9□□□□□ -1.95
SDS3YIL084C FAR8Q05040 523 aa2.9□□□□□ -1.95
SDS3YIL084C ECM19Q06011 112 aa2.9□□□□□ -1.95
SDS3YIL084C RRS1Q08746 203 aaKnown RBP2.9□□□□□ -1.95
SDS3YIL084C COX5BP00425 151 aa2.89□□□□□ -1.95
SDS3YIL084C YAK1P14680 807 aa2.89□□□□□ -1.95
SDS3YIL084C CUP2P15315 225 aa2.89□□□□□ -1.95
SDS3YIL084C YRA2P36036 203 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
SDS3YIL084C PRY2P36110 329 aa2.89□□□□□ -1.95
SDS3YIL084C FIG1P38224 298 aa2.89□□□□□ -1.95
SDS3YIL084C YGR201CP42936 225 aa2.89□□□□□ -1.95
SDS3YIL084C NUP57P48837 541 aa2.89□□□□□ -1.95
SDS3YIL084C MPC1P53157 130 aaKnown RBP2.89□□□□□ -1.95
SDS3YIL084C MPP6P53725 186 aaPredicted RBP2.89□□□□□ -1.95
SDS3YIL084C SMD1Q02260 146 aaPredicted RBP2.89□□□□□ -1.95
SDS3YIL084C SPO19Q03029 223 aa2.89□□□□□ -1.95
SDS3YIL084C VPS60Q03390 229 aa2.89□□□□□ -1.95
SDS3YIL084C DML1Q03652 475 aa2.89□□□□□ -1.95
SDS3YIL084C YOR029WQ12243 111 aa2.89□□□□□ -1.95
SDS3YIL084C PRM7Q12459 698 aa2.89□□□□□ -1.95
SDS3YIL084C RPL31AP0C2H8 113 aaKnown RBP2.88□□□□□ -1.95
SDS3YIL084C APA2P22108 325 aa2.88□□□□□ -1.95
SDS3YIL084C MRPL6P32904 214 aa2.88□□□□□ -1.95
SDS3YIL084C NUF2P33895 451 aa2.88□□□□□ -1.95
SDS3YIL084C AST1P35183 429 aa2.88□□□□□ -1.95
SDS3YIL084C ASP1P38986 381 aaPredicted RBP2.88□□□□□ -1.95
SDS3YIL084C HPM1P40481 377 aa2.88□□□□□ -1.95
SDS3YIL084C GEP7P53171 287 aa2.88□□□□□ -1.95
SDS3YIL084C BNA7Q04066 261 aa2.88□□□□□ -1.95
SDS3YIL084C SEC13Q04491 297 aaKnown RBP2.88□□□□□ -1.95
SDS3YIL084C RNH202Q05635 350 aa2.88□□□□□ -1.95
SDS3YIL084C YLR413WQ06689 675 aa2.88□□□□□ -1.95
SDS3YIL084C YOR292CQ08743 309 aa2.88□□□□□ -1.95
SDS3YIL084C NOT5Q12514 560 aaPredicted RBP2.88□□□□□ -1.95
SDS3YIL084C THP2O13539 261 aaKnown RBP2.87□□□□□ -1.95
SDS3YIL084C DSF1P0CX08 502 aa2.87□□□□□ -1.95
SDS3YIL084C YNR073CP0CX09 502 aa2.87□□□□□ -1.95
SDS3YIL084C STE18P18852 110 aa2.87□□□□□ -1.95
SDS3YIL084C MRPS28P21771 286 aa2.87□□□□□ -1.95
SDS3YIL084C MSN4P33749 630 aa2.87□□□□□ -1.95
SDS3YIL084C YKL063CP35725 167 aa2.87□□□□□ -1.95
SDS3YIL084C AIM29P36154 155 aa2.87□□□□□ -1.95
SDS3YIL084C PEX18P38855 283 aa2.87□□□□□ -1.95
SDS3YIL084C EDC2P40023 145 aaPredicted RBP2.87□□□□□ -1.95
SDS3YIL084C PCL7P40186 285 aa2.87□□□□□ -1.95
SDS3YIL084C PET191Q02772 108 aa2.87□□□□□ -1.95
SDS3YIL084C RRN5Q02983 363 aa2.87□□□□□ -1.95
SDS3YIL084C YMR166CQ03829 368 aa2.87□□□□□ -1.95
SDS3YIL084C ARC18Q05933 178 aaKnown RBP2.87□□□□□ -1.95
SDS3YIL084C YPR127WQ06494 345 aa2.87□□□□□ -1.95
SDS3YIL084C YPR195CQ06594 109 aa2.87□□□□□ -1.95
SDS3YIL084C SIR2P06700 562 aa2.86□□□□□ -1.95
SDS3YIL084C YOL162WP0CF19 215 aa2.86□□□□□ -1.95
SDS3YIL084C YOL163WP0CF20 169 aa2.86□□□□□ -1.95
SDS3YIL084C YPC1P38298 316 aa2.86□□□□□ -1.95
SDS3YIL084C YIL059CP40520 121 aa2.86□□□□□ -1.95
SDS3YIL084C YJL016WP47072 561 aa2.86□□□□□ -1.95
SDS3YIL084C PNC1P53184 216 aaKnown RBP2.86□□□□□ -1.95
SDS3YIL084C NUP49Q02199 472 aa2.86□□□□□ -1.95
SDS3YIL084C SFH1Q06168 426 aa2.86□□□□□ -1.95
SDS3YIL084C BCP1Q06338 283 aa2.86□□□□□ -1.95
SDS3YIL084C GPN3Q06543 272 aa2.86□□□□□ -1.95
SDS3YIL084C MSW1P04803 379 aa2.85□□□□□ -1.95
SDS3YIL084C CSM1P25651 190 aa2.85□□□□□ -1.95
SDS3YIL084C RRF1P38771 230 aa2.85□□□□□ -1.95
SDS3YIL084C TIR3P40552 269 aa2.85□□□□□ -1.95
SDS3YIL084C YIA6P40556 373 aa2.85□□□□□ -1.95
SDS3YIL084C FIP1P45976 327 aa2.85□□□□□ -1.95
SDS3YIL084C BAT2P47176 376 aaKnown RBP2.85□□□□□ -1.95
SDS3YIL084C UFD1P53044 361 aa2.85□□□□□ -1.95
SDS3YIL084C YGL235WP53071 178 aa2.85□□□□□ -1.95
SDS3YIL084C YDC1Q02896 317 aa2.85□□□□□ -1.95
SDS3YIL084C ATG38Q05789 226 aaKnown RBP2.85□□□□□ -1.95
SDS3YIL084C NNT1Q05874 261 aa2.85□□□□□ -1.95
SDS3YIL084C BER1Q06688 274 aaKnown RBP2.85□□□□□ -1.95
SDS3YIL084C ASR1Q06834 288 aa2.85□□□□□ -1.95
SDS3YIL084C SPC3Q12133 184 aa2.85□□□□□ -1.95
SDS3YIL084C ATP6P00854 259 aa2.84□□□□□ -1.95
SDS3YIL084C DOA4P32571 926 aa2.84□□□□□ -1.95
SDS3YIL084C SPO73P40031 143 aa2.84□□□□□ -1.95
SDS3YIL084C AGP3P43548 558 aa2.84□□□□□ -1.95
SDS3YIL084C GET1P53192 235 aa2.84□□□□□ -1.95
SDS3YIL084C GPI17Q04080 534 aa2.84□□□□□ -1.95
SDS3YIL084C YDR391CQ04170 232 aa2.84□□□□□ -1.95
SDS3YIL084C SYC1Q08553 188 aaPredicted RBP2.84□□□□□ -1.95
SDS3YIL084C YMR105W-AQ8TGS8 64 aa2.84□□□□□ -1.95
SDS3YIL084C IDH1P28834 360 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SDS3YIL084C RMD6P39975 231 aa2.83□□□□□ -1.96
SDS3YIL084C PIR5P46999 287 aa2.83□□□□□ -1.96
SDS3YIL084C ECM18Q04623 453 aa2.83□□□□□ -1.96
SDS3YIL084C RRT8Q08219 342 aa2.83□□□□□ -1.96
SDS3YIL084C POM33Q12164 279 aa2.83□□□□□ -1.96
SDS3YIL084C FCY1Q12178 158 aa2.83□□□□□ -1.96
SDS3YIL084C MRPL23Q12487 163 aaPredicted RBP2.83□□□□□ -1.96
SDS3YIL084C PEX3P28795 441 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms