RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C GVP36P40531 326 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C YKE4P40544 346 aa2.75□□□□□ -1.97
XRN1YGL173C MEP2P41948 499 aa2.75□□□□□ -1.97
XRN1YGL173C THP3Q12049 470 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C RPS14AP06367 137 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C YOL163WP0CF20 169 aa2.75□□□□□ -1.97
XRN1YGL173C CUP1-1P0CX80 61 aa2.75□□□□□ -1.97
XRN1YGL173C CUP1-2P0CX81 61 aa2.75□□□□□ -1.97
XRN1YGL173C CPR3P25719 182 aa2.75□□□□□ -1.97
XRN1YGL173C HYM1P32464 399 aa2.75□□□□□ -1.97
XRN1YGL173C YKL097CP34245 136 aa2.75□□□□□ -1.97
XRN1YGL173C NAT2P37293 288 aa2.75□□□□□ -1.97
XRN1YGL173C GGC1P38988 300 aa2.75□□□□□ -1.97
XRN1YGL173C RPS14BP39516 138 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C AGE2P40529 298 aa2.75□□□□□ -1.97
XRN1YGL173C WWM1P43582 211 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C GRH1Q04410 372 aaKnown RBP2.75□□□□□ -1.97
XRN1YGL173C YOL085CQ99345 113 aa2.75□□□□□ -1.97
XRN1YGL173C FRM2P37261 193 aa2.74□□□□□ -1.97
XRN1YGL173C SEN34P39707 275 aa2.74□□□□□ -1.97
XRN1YGL173C PFS2P42841 465 aaKnown RBP2.74□□□□□ -1.97
XRN1YGL173C GOT1Q03554 138 aa2.74□□□□□ -1.97
XRN1YGL173C MIM1Q08176 113 aa2.74□□□□□ -1.97
XRN1YGL173C YOR376WQ08900 122 aa2.74□□□□□ -1.97
XRN1YGL173C PTC1P35182 281 aa2.74□□□□□ -1.97
XRN1YGL173C PRY2P36110 329 aa2.74□□□□□ -1.97
XRN1YGL173C ATG12P38316 186 aa2.74□□□□□ -1.97
XRN1YGL173C SOK1P40317 901 aa2.74□□□□□ -1.97
XRN1YGL173C SYS1P41544 203 aa2.74□□□□□ -1.97
XRN1YGL173C LCB3P47013 409 aa2.74□□□□□ -1.97
XRN1YGL173C BIR1P47134 954 aa2.74□□□□□ -1.97
XRN1YGL173C GTR2P53290 341 aa2.74□□□□□ -1.97
XRN1YGL173C RSM27P53305 110 aa2.74□□□□□ -1.97
XRN1YGL173C PIR3Q03180 325 aa2.74□□□□□ -1.97
XRN1YGL173C ECM11Q04110 302 aa2.74□□□□□ -1.97
XRN1YGL173C FSH2Q05015 223 aa2.74□□□□□ -1.97
XRN1YGL173C ZEO1Q08245 113 aa2.74□□□□□ -1.97
XRN1YGL173C ODC2Q99297 307 aa2.74□□□□□ -1.97
XRN1YGL173C REP2P03872 296 aa2.74□□□□□ -1.97
XRN1YGL173C MTC4P38335 694 aaKnown RBP2.74□□□□□ -1.97
XRN1YGL173C CAB4P53332 305 aa2.74□□□□□ -1.97
XRN1YGL173C PSF1Q12488 208 aa2.74□□□□□ -1.97
XRN1YGL173C DFM1Q12743 341 aaKnown RBP2.74□□□□□ -1.97
XRN1YGL173C YAL063C-AQ3E791 96 aa2.74□□□□□ -1.97
XRN1YGL173C ISD11Q6Q560 94 aa2.74□□□□□ -1.97
XRN1YGL173C PUT1P09368 476 aa2.73□□□□□ -1.97
XRN1YGL173C SHB17P36136 271 aaKnown RBP2.73□□□□□ -1.97
XRN1YGL173C POP4P38336 279 aa2.73□□□□□ -1.97
XRN1YGL173C ASP1P38986 381 aaPredicted RBP2.73□□□□□ -1.97
XRN1YGL173C TTI2P47168 421 aa2.73□□□□□ -1.97
XRN1YGL173C DOG2P38773 246 aa2.73□□□□□ -1.97
XRN1YGL173C GAA1P39012 614 aa2.73□□□□□ -1.97
XRN1YGL173C YJL213WP40896 331 aa2.73□□□□□ -1.97
XRN1YGL173C YGL204CP53089 101 aa2.73□□□□□ -1.97
XRN1YGL173C RAV2Q03956 351 aa2.73□□□□□ -1.97
XRN1YGL173C SPG3Q04398 127 aaPredicted RBP2.73□□□□□ -1.97
XRN1YGL173C YMR320WQ04897 101 aa2.73□□□□□ -1.97
XRN1YGL173C IES3Q12345 250 aa2.73□□□□□ -1.97
XRN1YGL173C PET20Q99373 253 aa2.73□□□□□ -1.97
XRN1YGL173C ERD1P16151 362 aa2.73□□□□□ -1.97
XRN1YGL173C RPB3P16370 318 aaKnown RBP2.73□□□□□ -1.97
XRN1YGL173C YDR366CP87287 132 aa2.73□□□□□ -1.97
XRN1YGL173C APS2Q00381 147 aa2.73□□□□□ -1.97
XRN1YGL173C VPS28Q02767 242 aa2.73□□□□□ -1.97
XRN1YGL173C YLR422WQ06409 1932 aa2.73□□□□□ -1.97
XRN1YGL173C EPT1P22140 391 aa2.73□□□□□ -1.97
XRN1YGL173C OCH1P31755 480 aa2.73□□□□□ -1.97
XRN1YGL173C EDC2P40023 145 aaPredicted RBP2.73□□□□□ -1.97
XRN1YGL173C MNN5P46982 586 aa2.73□□□□□ -1.97
XRN1YGL173C YGL034CP53186 121 aa2.73□□□□□ -1.97
XRN1YGL173C RHO3Q00245 231 aaKnown RBP2.73□□□□□ -1.97
XRN1YGL173C ATG5Q12380 294 aa2.73□□□□□ -1.97
XRN1YGL173C GEP5Q12393 293 aa2.73□□□□□ -1.97
XRN1YGL173C CDC28P00546 298 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C ADK1P07170 222 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C NSP1P14907 823 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C PCL1P24867 279 aa2.72□□□□□ -1.97
XRN1YGL173C YPR127WQ06494 345 aa2.72□□□□□ -1.97
XRN1YGL173C PST2Q12335 198 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C UBI4P0CG63 381 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C YRA2P36036 203 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
XRN1YGL173C PET8P38921 284 aa2.72□□□□□ -1.97
XRN1YGL173C BDH1P39714 382 aa2.72□□□□□ -1.97
XRN1YGL173C PEX22P39718 180 aa2.72□□□□□ -1.97
XRN1YGL173C YEA4P40004 342 aa2.72□□□□□ -1.97
XRN1YGL173C YER134CP40081 178 aa2.72□□□□□ -1.97
XRN1YGL173C PAC10P48363 199 aa2.72□□□□□ -1.97
XRN1YGL173C COF1Q03048 143 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C YLR126CQ12288 251 aa2.72□□□□□ -1.97
XRN1YGL173C CPT1P17898 393 aa2.72□□□□□ -1.97
XRN1YGL173C AAT2P23542 418 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C STP22P25604 385 aa2.72□□□□□ -1.97
XRN1YGL173C CDC50P25656 391 aa2.72□□□□□ -1.97
XRN1YGL173C ALB1P47019 175 aaPredicted RBP2.72□□□□□ -1.97
XRN1YGL173C ELP3Q02908 557 aaKnown RBP2.72□□□□□ -1.97
XRN1YGL173C YPS3Q12303 508 aa2.72□□□□□ -1.97
XRN1YGL173C YMR316C-AI2HB70 103 aa2.71□□□□□ -1.97
XRN1YGL173C COX5AP00424 153 aa2.71□□□□□ -1.97
XRN1YGL173C ADH3P07246 375 aaKnown RBP2.71□□□□□ -1.97
XRN1YGL173C FCY2P17064 533 aa2.71□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms