RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C GET4Q12125 312 aa2.38□□□□□ -2.03
SCL1YGL011C MDM32Q12171 622 aa2.38□□□□□ -2.03
SCL1YGL011C MAG1P22134 296 aaKnown RBP2.37□□□□□ -2.03
SCL1YGL011C RAD51P25454 400 aa2.37□□□□□ -2.03
SCL1YGL011C YBR219CP38317 127 aa2.37□□□□□ -2.03
SCL1YGL011C AIM25P47140 327 aa2.37□□□□□ -2.03
SCL1YGL011C CGR1P53188 120 aa2.37□□□□□ -2.03
SCL1YGL011C NOP19P53317 196 aaPredicted RBP2.37□□□□□ -2.03
SCL1YGL011C MRPS17Q03246 237 aaPredicted RBP2.37□□□□□ -2.03
SCL1YGL011C GGA1Q06336 557 aa2.37□□□□□ -2.03
SCL1YGL011C JIP3O13555 125 aa2.36□□□□□ -2.03
SCL1YGL011C URA5P13298 226 aaKnown RBP2.36□□□□□ -2.03
SCL1YGL011C RPB3P16370 318 aaKnown RBP2.36□□□□□ -2.03
SCL1YGL011C SNC2P33328 115 aa2.36□□□□□ -2.03
SCL1YGL011C NUF2P33895 451 aa2.36□□□□□ -2.03
SCL1YGL011C OPY1P38271 328 aa2.36□□□□□ -2.03
SCL1YGL011C BUD25P85052 153 aa2.36□□□□□ -2.03
SCL1YGL011C ABP140Q08641 628 aaKnown RBP2.36□□□□□ -2.03
SCL1YGL011C FLO9P39712 1322 aa2.36□□□□□ -2.03
SCL1YGL011C CHD1P32657 1468 aa2.35□□□□□ -2.03
SCL1YGL011C ATP15P21306 62 aa2.35□□□□□ -2.03
SCL1YGL011C HMF1P40037 129 aaKnown RBP2.35□□□□□ -2.03
SCL1YGL011C GET1P53192 235 aa2.35□□□□□ -2.03
SCL1YGL011C YNL247WP53852 767 aaKnown RBP2.35□□□□□ -2.03
SCL1YGL011C GPM2Q12008 311 aa2.35□□□□□ -2.03
SCL1YGL011C IKI3Q06706 1349 aaKnown RBP2.35□□□□□ -2.03
SCL1YGL011C QCR7P00128 127 aa2.34□□□□□ -2.03
SCL1YGL011C GAA1P39012 614 aa2.34□□□□□ -2.03
SCL1YGL011C YER135CP40082 130 aa2.34□□□□□ -2.03
SCL1YGL011C YDR274CP87283 123 aa2.34□□□□□ -2.03
SCL1YGL011C FSF1Q12029 327 aaKnown RBP2.34□□□□□ -2.03
SCL1YGL011C CYR1P08678 2026 aaKnown RBP2.34□□□□□ -2.04
SCL1YGL011C CPA1P07258 411 aaKnown RBP2.33□□□□□ -2.04
SCL1YGL011C MMS2P53152 137 aa2.33□□□□□ -2.04
SCL1YGL011C TOP2P06786 1428 aaKnown RBP2.33□□□□□ -2.04
SCL1YGL011C MET5P47169 1442 aa2.33□□□□□ -2.04
SCL1YGL011C MMS1Q06211 1407 aa2.33□□□□□ -2.04
SCL1YGL011C ACP1P32463 125 aa2.32□□□□□ -2.04
SCL1YGL011C ARC19P33204 171 aaKnown RBP2.32□□□□□ -2.04
SCL1YGL011C YBR285WP38354 144 aa2.32□□□□□ -2.04
SCL1YGL011C GLE2P40066 365 aa2.32□□□□□ -2.04
SCL1YGL011C YLR162WQ06235 118 aa2.32□□□□□ -2.04
SCL1YGL011C RAD50P12753 1312 aa2.32□□□□□ -2.04
SCL1YGL011C MYO4P32492 1471 aa2.32□□□□□ -2.04
SCL1YGL011C SIR2P06700 562 aa2.31□□□□□ -2.04
SCL1YGL011C CKS1P20486 150 aaKnown RBP2.31□□□□□ -2.04
SCL1YGL011C YKR045CP36138 183 aa2.31□□□□□ -2.04
SCL1YGL011C SMD2Q06217 110 aaKnown RBP2.31□□□□□ -2.04
SCL1YGL011C CSI2Q08054 341 aa2.31□□□□□ -2.04
SCL1YGL011C SAC3P46674 1301 aa2.31□□□□□ -2.04
SCL1YGL011C MRS1P07266 363 aa2.3□□□□□ -2.04
SCL1YGL011C YOL162WP0CF19 215 aa2.3□□□□□ -2.04
SCL1YGL011C YPK2P18961 677 aa2.3□□□□□ -2.04
SCL1YGL011C KDX1P36005 433 aa2.3□□□□□ -2.04
SCL1YGL011C ERG10P41338 398 aaKnown RBP2.3□□□□□ -2.04
SCL1YGL011C ARO80Q04052 950 aa2.3□□□□□ -2.04
SCL1YGL011C ATG40Q99325 256 aa2.3□□□□□ -2.04
SCL1YGL011C RAD9P14737 1309 aa2.3□□□□□ -2.04
SCL1YGL011C ECM5Q03214 1411 aa2.29□□□□□ -2.04
SCL1YGL011C SMC4Q12267 1418 aa2.29□□□□□ -2.04
SCL1YGL011C RPL27AP0C2H6 136 aaKnown RBP2.29□□□□□ -2.04
SCL1YGL011C APA2P22108 325 aa2.29□□□□□ -2.04
SCL1YGL011C HOP2P53187 214 aa2.29□□□□□ -2.04
SCL1YGL011C HNT1Q04344 158 aaKnown RBP2.29□□□□□ -2.04
SCL1YGL011C SPP41P38904 1435 aa2.28□□□□□ -2.04
SCL1YGL011C RIO2P40160 425 aaKnown RBP2.28□□□□□ -2.04
SCL1YGL011C SAY1P53324 424 aa2.28□□□□□ -2.04
SCL1YGL011C ANT1Q06497 328 aa2.28□□□□□ -2.04
SCL1YGL011C UBR2Q07963 1872 aa2.28□□□□□ -2.04
SCL1YGL011C MON2P48563 1636 aaPredicted RBP2.28□□□□□ -2.05
SCL1YGL011C XRN1P22147 1528 aaKnown RBP2.27□□□□□ -2.05
SCL1YGL011C UFD4P33202 1483 aa2.27□□□□□ -2.05
SCL1YGL011C SSN2P38931 1420 aa2.27□□□□□ -2.05
SCL1YGL011C SEN2P16658 377 aa2.27□□□□□ -2.05
SCL1YGL011C SEC14P24280 304 aaKnown RBP2.27□□□□□ -2.05
SCL1YGL011C OCH1P31755 480 aa2.27□□□□□ -2.05
SCL1YGL011C ASF2P32448 525 aaPredicted RBP2.27□□□□□ -2.05
SCL1YGL011C PDR10P51533 1564 aa2.27□□□□□ -2.05
SCL1YGL011C YLR236CA0A023PZG4 107 aa2.26□□□□□ -2.05
SCL1YGL011C MBF1O14467 151 aaKnown RBP2.26□□□□□ -2.05
SCL1YGL011C CNB1P25296 175 aa2.26□□□□□ -2.05
SCL1YGL011C YGL010WP25338 174 aa2.26□□□□□ -2.05
SCL1YGL011C RPC19P28000 142 aaKnown RBP2.26□□□□□ -2.05
SCL1YGL011C SHE2P36068 246 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SCL1YGL011C YBR209WP38311 105 aa2.26□□□□□ -2.05
SCL1YGL011C YBR220CP38318 560 aa2.26□□□□□ -2.05
SCL1YGL011C ERJ5P43613 295 aaPredicted RBP2.26□□□□□ -2.05
SCL1YGL011C POP3P53833 195 aaPredicted RBP2.26□□□□□ -2.05
SCL1YGL011C RTC4P53850 401 aa2.26□□□□□ -2.05
SCL1YGL011C PLP1Q04004 230 aa2.26□□□□□ -2.05
SCL1YGL011C FUS2Q05670 677 aa2.26□□□□□ -2.05
SCL1YGL011C TY1B-DR4Q07793 1604 aa2.26□□□□□ -2.05
SCL1YGL011C MMS22Q06164 1454 aa2.26□□□□□ -2.05
SCL1YGL011C BUD4P47136 1447 aa2.25□□□□□ -2.05
SCL1YGL011C THO2P53552 1597 aaKnown RBP2.25□□□□□ -2.05
SCL1YGL011C ADE1P27616 306 aa2.25□□□□□ -2.05
SCL1YGL011C TMA19P35691 167 aaKnown RBP2.25□□□□□ -2.05
SCL1YGL011C KNH1P50112 268 aa2.25□□□□□ -2.05
SCL1YGL011C EFM5P53200 248 aaKnown RBP2.25□□□□□ -2.05
SCL1YGL011C MPC3P53311 146 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 148.9 ms