RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W JAC1P53193 184 aa1.65□□□□□ -2.15
NIC96YFR002W GOT1Q03554 138 aa1.65□□□□□ -2.15
NIC96YFR002W NOC4Q06512 552 aaPredicted RBP1.65□□□□□ -2.15
NIC96YFR002W YBL008W-AQ3E821 79 aa1.65□□□□□ -2.15
NIC96YFR002W GRX2P17695 143 aaKnown RBP1.64□□□□□ -2.15
NIC96YFR002W TRR1P29509 319 aaKnown RBP1.64□□□□□ -2.15
NIC96YFR002W ECM13P38195 257 aa1.64□□□□□ -2.15
NIC96YFR002W ECM33P38248 429 aaKnown RBP1.64□□□□□ -2.15
NIC96YFR002W SHG1P38337 142 aa1.64□□□□□ -2.15
NIC96YFR002W SRP14P38985 146 aa1.64□□□□□ -2.15
NIC96YFR002W MTW1P39731 289 aa1.64□□□□□ -2.15
NIC96YFR002W YJL016WP47072 561 aa1.64□□□□□ -2.15
NIC96YFR002W UFD1P53044 361 aa1.64□□□□□ -2.15
NIC96YFR002W YGL118CP53132 145 aa1.64□□□□□ -2.15
NIC96YFR002W ERV29P53337 310 aa1.64□□□□□ -2.15
NIC96YFR002W SWT21P53873 357 aaPredicted RBP1.64□□□□□ -2.15
NIC96YFR002W YDR124WQ04608 324 aa1.64□□□□□ -2.15
NIC96YFR002W GRX8Q05926 109 aa1.64□□□□□ -2.15
NIC96YFR002W GGA1Q06336 557 aa1.64□□□□□ -2.15
NIC96YFR002W YET3Q07451 203 aa1.64□□□□□ -2.15
NIC96YFR002W MRS1P07266 363 aa1.64□□□□□ -2.15
NIC96YFR002W MEI4P29467 408 aa1.64□□□□□ -2.15
NIC96YFR002W APS1P35181 156 aa1.64□□□□□ -2.15
NIC96YFR002W ECM14P38836 430 aa1.64□□□□□ -2.15
NIC96YFR002W SPO73P40031 143 aa1.64□□□□□ -2.15
NIC96YFR002W SYS1P41544 203 aa1.64□□□□□ -2.15
NIC96YFR002W YJL028WP47062 111 aa1.64□□□□□ -2.15
NIC96YFR002W YJR056CP47115 236 aa1.64□□□□□ -2.15
NIC96YFR002W SSU72P53538 206 aaPredicted RBP1.64□□□□□ -2.15
NIC96YFR002W OSH6Q02201 448 aa1.64□□□□□ -2.15
NIC96YFR002W COX10P21592 462 aa1.63□□□□□ -2.15
NIC96YFR002W CAF4P36130 643 aa1.63□□□□□ -2.15
NIC96YFR002W MAK5P38112 773 aaPredicted RBP1.63□□□□□ -2.15
NIC96YFR002W TRR2P38816 342 aa1.63□□□□□ -2.15
NIC96YFR002W ASP1P38986 381 aaPredicted RBP1.63□□□□□ -2.15
NIC96YFR002W TMA22P47089 198 aaPredicted RBP1.63□□□□□ -2.15
NIC96YFR002W TCA17P32613 152 aa1.63□□□□□ -2.15
NIC96YFR002W YHL044WP38727 235 aa1.63□□□□□ -2.15
NIC96YFR002W YHI9P38765 294 aa1.63□□□□□ -2.15
NIC96YFR002W CAT5P41735 233 aa1.63□□□□□ -2.15
NIC96YFR002W FAR7P43592 221 aa1.63□□□□□ -2.15
NIC96YFR002W MIC19P43594 170 aa1.63□□□□□ -2.15
NIC96YFR002W RTC4P53850 401 aa1.63□□□□□ -2.15
NIC96YFR002W YNL247WP53852 767 aaKnown RBP1.63□□□□□ -2.15
NIC96YFR002W YMR315WQ04869 349 aaKnown RBP1.63□□□□□ -2.15
NIC96YFR002W YLR179CQ06252 201 aaKnown RBP1.63□□□□□ -2.15
NIC96YFR002W ZWF1P11412 505 aaKnown RBP1.62□□□□□ -2.15
NIC96YFR002W SEC22P22214 214 aa1.62□□□□□ -2.15
NIC96YFR002W CLG1P35190 452 aa1.62□□□□□ -2.15
NIC96YFR002W DOG1P38774 246 aa1.62□□□□□ -2.15
NIC96YFR002W AIM25P47140 327 aa1.62□□□□□ -2.15
NIC96YFR002W UBC12P52491 188 aa1.62□□□□□ -2.15
NIC96YFR002W YOL019WQ08157 551 aa1.62□□□□□ -2.15
NIC96YFR002W EMP46Q12396 444 aa1.62□□□□□ -2.15
NIC96YFR002W YPL247CQ12523 523 aa1.62□□□□□ -2.15
NIC96YFR002W YHR214C-EQ8TGK0 99 aa1.62□□□□□ -2.15
NIC96YFR002W MDM35O60200 86 aa1.62□□□□□ -2.15
NIC96YFR002W PRE7P23724 241 aaKnown RBP1.62□□□□□ -2.15
NIC96YFR002W YER076CP40049 302 aa1.62□□□□□ -2.15
NIC96YFR002W YIL054WP40524 105 aa1.62□□□□□ -2.15
NIC96YFR002W YIR035CP40579 254 aa1.62□□□□□ -2.15
NIC96YFR002W UFE1P41834 346 aa1.62□□□□□ -2.15
NIC96YFR002W RPA43P46669 326 aa1.62□□□□□ -2.15
NIC96YFR002W RPE1P46969 238 aa1.62□□□□□ -2.15
NIC96YFR002W GTR2P53290 341 aa1.62□□□□□ -2.15
NIC96YFR002W MRX8Q05473 314 aa1.62□□□□□ -2.15
NIC96YFR002W YOL160WQ08321 113 aa1.62□□□□□ -2.15
NIC96YFR002W YOR283WQ12040 230 aaKnown RBP1.62□□□□□ -2.15
NIC96YFR002W IGO2Q9P305 131 aa1.62□□□□□ -2.15
NIC96YFR002W QCR2P07257 368 aa1.61□□□□□ -2.15
NIC96YFR002W ARO7P32178 256 aa1.61□□□□□ -2.15
NIC96YFR002W MSA2P36157 363 aa1.61□□□□□ -2.15
NIC96YFR002W FIG1P38224 298 aa1.61□□□□□ -2.15
NIC96YFR002W YER189WP40104 122 aa1.61□□□□□ -2.15
NIC96YFR002W TIF34P40217 347 aaKnown RBP1.61□□□□□ -2.15
NIC96YFR002W MDM34P53083 459 aa1.61□□□□□ -2.15
NIC96YFR002W CAX4P53223 239 aa1.61□□□□□ -2.15
NIC96YFR002W YNL184CP53876 108 aa1.61□□□□□ -2.15
NIC96YFR002W LSM7P53905 115 aaKnown RBP1.61□□□□□ -2.15
NIC96YFR002W NNT1Q05874 261 aa1.61□□□□□ -2.15
NIC96YFR002W YLR030WQ07967 263 aa1.61□□□□□ -2.15
NIC96YFR002W BRX1Q08235 291 aaKnown RBP1.61□□□□□ -2.15
NIC96YFR002W YDL211CQ12121 372 aa1.61□□□□□ -2.15
NIC96YFR002W SMT3Q12306 101 aaKnown RBP1.61□□□□□ -2.15
NIC96YFR002W STT4P37297 1900 aa1.61□□□□□ -2.15
NIC96YFR002W TOM40P23644 387 aaKnown RBP1.61□□□□□ -2.15
NIC96YFR002W TAH1P25638 111 aaPredicted RBP1.61□□□□□ -2.15
NIC96YFR002W TEM1P38987 245 aa1.61□□□□□ -2.15
NIC96YFR002W IRC22P40006 225 aa1.61□□□□□ -2.15
NIC96YFR002W PRM8P53174 237 aa1.61□□□□□ -2.15
NIC96YFR002W TVP15Q03860 143 aa1.61□□□□□ -2.15
NIC96YFR002W CUP2P15315 225 aa1.6□□□□□ -2.15
NIC96YFR002W YCR090CP25654 182 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W BMH1P29311 267 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W SSH1P38353 490 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W BDH1P39714 382 aa1.6□□□□□ -2.15
NIC96YFR002W PDS1P40316 373 aaPredicted RBP1.6□□□□□ -2.15
NIC96YFR002W FIS1P40515 155 aa1.6□□□□□ -2.15
NIC96YFR002W YGR050CP53231 118 aa1.6□□□□□ -2.15
NIC96YFR002W NUP49Q02199 472 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms