RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C SPO13P23624 291 aa0.23□□□□□ -2.37
PCF11YDR228C APS1P35181 156 aa0.23□□□□□ -2.37
PCF11YDR228C BRR6P53062 197 aa0.23□□□□□ -2.37
PCF11YDR228C MPC3P53311 146 aa0.23□□□□□ -2.37
PCF11YDR228C FYV6P53913 173 aa0.23□□□□□ -2.37
PCF11YDR228C DAD4P69851 72 aa0.23□□□□□ -2.37
PCF11YDR228C MGM101P32787 269 aaKnown RBP0.22□□□□□ -2.37
PCF11YDR228C MIC26P50087 233 aa0.22□□□□□ -2.37
PCF11YDR228C LAP3Q01532 483 aaKnown RBP RIP-Chip data0.22□□□□□ -2.37not detected
PCF11YDR228C YPR174CQ06616 221 aaPredicted RBP0.22□□□□□ -2.37
PCF11YDR228C YPR203WQ08994 102 aa0.22□□□□□ -2.37
PCF11YDR228C STP22P25604 385 aa0.22□□□□□ -2.37
PCF11YDR228C BXI1P48558 297 aa0.22□□□□□ -2.37
PCF11YDR228C YDR391CQ04170 232 aa0.22□□□□□ -2.37
PCF11YDR228C YFR032C-BQ8TGU2 87 aa0.22□□□□□ -2.37
PCF11YDR228C RPB7P34087 171 aa0.21□□□□□ -2.38
PCF11YDR228C PRX1P34227 261 aaKnown RBP0.21□□□□□ -2.38
PCF11YDR228C FMC1P40491 155 aa0.21□□□□□ -2.38
PCF11YDR228C YNG1Q08465 219 aa0.21□□□□□ -2.38
PCF11YDR228C CDC36P06100 191 aaPredicted RBP0.2□□□□□ -2.38
PCF11YDR228C MRPL15P36523 253 aa0.2□□□□□ -2.38
PCF11YDR228C DGA1Q08650 418 aa0.2□□□□□ -2.38
PCF11YDR228C ODC2Q99297 307 aa0.2□□□□□ -2.38
PCF11YDR228C UBC8P28263 218 aa0.2□□□□□ -2.38
PCF11YDR228C YUH1P35127 236 aa0.2□□□□□ -2.38
PCF11YDR228C YHL018WP38744 120 aaPredicted RBP0.2□□□□□ -2.38
PCF11YDR228C UBC12P52491 188 aa0.2□□□□□ -2.38
PCF11YDR228C RRN5Q02983 363 aa0.2□□□□□ -2.38
PCF11YDR228C SSO1P32867 290 aa0.19□□□□□ -2.38
PCF11YDR228C AST2P39945 430 aaKnown RBP0.19□□□□□ -2.38
PCF11YDR228C ALG13P53178 202 aa0.19□□□□□ -2.38
PCF11YDR228C BNA7Q04066 261 aa0.19□□□□□ -2.38
PCF11YDR228C SEN2P16658 377 aa0.18□□□□□ -2.38
PCF11YDR228C PHO85P17157 305 aa0.18□□□□□ -2.38
PCF11YDR228C YBR242WP38331 238 aa0.18□□□□□ -2.38
PCF11YDR228C COG5P53951 403 aa0.18□□□□□ -2.38
PCF11YDR228C PET191Q02772 108 aa0.18□□□□□ -2.38
PCF11YDR228C RNH202Q05635 350 aa0.18□□□□□ -2.38
PCF11YDR228C PTM1P32857 523 aa0.18□□□□□ -2.38
PCF11YDR228C RMD6P39975 231 aa0.18□□□□□ -2.38
PCF11YDR228C AIM25P47140 327 aa0.18□□□□□ -2.38
PCF11YDR228C POR1P04840 283 aaKnown RBP0.17□□□□□ -2.38
PCF11YDR228C MATALPHA1P0CY06 175 aa0.17□□□□□ -2.38
PCF11YDR228C HMLALPHA1P0CY07 175 aa0.17□□□□□ -2.38
PCF11YDR228C ECM4P36156 370 aa0.17□□□□□ -2.38
PCF11YDR228C FIT2Q08906 153 aa0.17□□□□□ -2.38
PCF11YDR228C YHR214C-EQ8TGK0 99 aa0.17□□□□□ -2.38
PCF11YDR228C FMP49A0A023PZB3 126 aa0.16□□□□□ -2.38
PCF11YDR228C COX8P04039 78 aa0.16□□□□□ -2.38
PCF11YDR228C MAG1P22134 296 aaKnown RBP0.16□□□□□ -2.38
PCF11YDR228C YHL037CP38733 133 aa0.16□□□□□ -2.38
PCF11YDR228C COX15P40086 486 aa0.16□□□□□ -2.38
PCF11YDR228C THG1P53215 237 aaKnown RBP0.16□□□□□ -2.38
PCF11YDR228C PRP11Q07350 266 aaPredicted RBP0.16□□□□□ -2.38
PCF11YDR228C TVP23P38962 199 aa0.16□□□□□ -2.38
PCF11YDR228C ERG10P41338 398 aaKnown RBP0.16□□□□□ -2.38
PCF11YDR228C PET117Q02771 107 aa0.16□□□□□ -2.38
PCF11YDR228C UPS3Q04006 179 aa0.16□□□□□ -2.38
PCF11YDR228C CCW12Q12127 133 aa0.16□□□□□ -2.38
PCF11YDR228C YIL177CP40434 1758 aa0.15□□□□□ -2.39
PCF11YDR228C YJL225CP40889 1758 aa0.15□□□□□ -2.39
PCF11YDR228C IKI3Q06706 1349 aaKnown RBP0.15□□□□□ -2.39
PCF11YDR228C OCH1P31755 480 aa0.15□□□□□ -2.39
PCF11YDR228C GCN3P14741 305 aa0.14□□□□□ -2.39
PCF11YDR228C CKS1P20486 150 aaKnown RBP0.14□□□□□ -2.39
PCF11YDR228C YCR016WP25617 290 aaKnown RBP0.14□□□□□ -2.39
PCF11YDR228C PDR17P53844 350 aa0.14□□□□□ -2.39
PCF11YDR228C LSM7P53905 115 aaKnown RBP0.14□□□□□ -2.39
PCF11YDR228C HNT1Q04344 158 aaKnown RBP0.14□□□□□ -2.39
PCF11YDR228C IRC23Q08416 157 aa0.14□□□□□ -2.39
PCF11YDR228C YMR31P19955 123 aa0.14□□□□□ -2.39
PCF11YDR228C PAN3P36102 679 aaPredicted RBP0.14□□□□□ -2.39
PCF11YDR228C GET1P53192 235 aa0.14□□□□□ -2.39
PCF11YDR228C RHO1P06780 209 aaKnown RBP0.13□□□□□ -2.39
PCF11YDR228C VMA6P32366 345 aaKnown RBP0.13□□□□□ -2.39
PCF11YDR228C ALB1P47019 175 aaPredicted RBP0.13□□□□□ -2.39
PCF11YDR228C YPR013CQ12145 317 aa0.13□□□□□ -2.39
PCF11YDR228C THP2O13539 261 aaKnown RBP0.12□□□□□ -2.39
PCF11YDR228C RTC3P38804 111 aaPredicted RBP0.12□□□□□ -2.39
PCF11YDR228C IRC18P47056 224 aa0.12□□□□□ -2.39
PCF11YDR228C MGA1P53050 456 aa0.12□□□□□ -2.39
PCF11YDR228C NOP19P53317 196 aaPredicted RBP0.12□□□□□ -2.39
PCF11YDR228C TAR1Q8TGM6 124 aa0.12□□□□□ -2.39
PCF11YDR228C SEY1Q99287 776 aa0.12□□□□□ -2.39
PCF11YDR228C YIL102CP40488 101 aa0.12□□□□□ -2.39
PCF11YDR228C MET31Q03081 177 aa0.12□□□□□ -2.39
PCF11YDR228C YMR295CQ03559 197 aa0.12□□□□□ -2.39
PCF11YDR228C YMR226CQ05016 267 aaKnown RBP0.12□□□□□ -2.39
PCF11YDR228C GGA1Q06336 557 aa0.12□□□□□ -2.39
PCF11YDR228C RPL25P04456 142 aaKnown RBP0.11□□□□□ -2.39
PCF11YDR228C AHT1P29589 182 aa0.11□□□□□ -2.39
PCF11YDR228C MAK5P38112 773 aaPredicted RBP0.11□□□□□ -2.39
PCF11YDR228C MIC12P38341 106 aa0.11□□□□□ -2.39
PCF11YDR228C DYN3Q04949 312 aa0.11□□□□□ -2.39
PCF11YDR228C INO80P53115 1489 aa0.11□□□□□ -2.39
PCF11YDR228C RPL28P02406 149 aaKnown RBP0.1□□□□□ -2.39
PCF11YDR228C ARO7P32178 256 aa0.1□□□□□ -2.39
PCF11YDR228C MSN4P33749 630 aa0.1□□□□□ -2.39
PCF11YDR228C SFK1P35735 353 aa0.1□□□□□ -2.39
PCF11YDR228C HMF1P40037 129 aaKnown RBP0.1□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms