RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W FMN1Q03778 218 aa3.35□□□□□ -1.87
HPR1YDR138W SEI1Q06058 285 aa3.35□□□□□ -1.87
HPR1YDR138W YPR063CQ12160 140 aa3.35□□□□□ -1.87
HPR1YDR138W RFM1Q12192 310 aa3.35□□□□□ -1.87
HPR1YDR138W YLR099W-AQ3E798 87 aa3.35□□□□□ -1.87
HPR1YDR138W TY1B-PR2P0C2J0 1756 aa3.35□□□□□ -1.87
HPR1YDR138W YLR419WQ06698 1435 aaKnown RBP3.34□□□□□ -1.87
HPR1YDR138W STF2P16965 84 aa3.34□□□□□ -1.87
HPR1YDR138W MGT1P26188 188 aa3.34□□□□□ -1.87
HPR1YDR138W YPR098CQ06089 161 aa3.34□□□□□ -1.87
HPR1YDR138W TIR4Q12218 487 aaPredicted RBP3.34□□□□□ -1.87
HPR1YDR138W YLR126CQ12288 251 aa3.34□□□□□ -1.87
HPR1YDR138W VPS15P22219 1454 aa3.34□□□□□ -1.88
HPR1YDR138W SPS2P08459 502 aa3.33□□□□□ -1.88
HPR1YDR138W SPT15P13393 240 aaKnown RBP3.33□□□□□ -1.88
HPR1YDR138W ALK2P32789 676 aaPredicted RBP3.33□□□□□ -1.88
HPR1YDR138W SWD3P38123 315 aa3.33□□□□□ -1.88
HPR1YDR138W YBR285WP38354 144 aa3.33□□□□□ -1.88
HPR1YDR138W DOG2P38773 246 aa3.33□□□□□ -1.88
HPR1YDR138W LSM4P40070 187 aaKnown RBP3.33□□□□□ -1.88
HPR1YDR138W MIC26P50087 233 aa3.33□□□□□ -1.88
HPR1YDR138W DIG2Q03373 323 aaKnown RBP3.33□□□□□ -1.88
HPR1YDR138W FEX2Q08991 375 aa3.33□□□□□ -1.88
HPR1YDR138W MDM32Q12171 622 aa3.33□□□□□ -1.88
HPR1YDR138W YHR213W-AQ8TGT4 77 aa3.33□□□□□ -1.88
HPR1YDR138W ROM2P51862 1356 aaKnown RBP3.33□□□□□ -1.88
HPR1YDR138W VAR1P02381 398 aa3.33□□□□□ -1.88
HPR1YDR138W FCY2P17064 533 aa3.33□□□□□ -1.88
HPR1YDR138W SCO1P23833 295 aa3.33□□□□□ -1.88
HPR1YDR138W GLR1P41921 483 aaKnown RBP3.33□□□□□ -1.88
HPR1YDR138W MEP2P41948 499 aa3.33□□□□□ -1.88
HPR1YDR138W YMR320WQ04897 101 aa3.33□□□□□ -1.88
HPR1YDR138W GRX8Q05926 109 aa3.33□□□□□ -1.88
HPR1YDR138W MCH1Q07376 486 aa3.33□□□□□ -1.88
HPR1YDR138W MSA1Q08471 629 aa3.33□□□□□ -1.88
HPR1YDR138W YPL278CQ08990 100 aa3.33□□□□□ -1.88
HPR1YDR138W PPT2Q12036 173 aa3.33□□□□□ -1.88
HPR1YDR138W RPL21BQ12672 160 aaKnown RBP3.33□□□□□ -1.88
HPR1YDR138W TAD3Q9URQ3 322 aa3.33□□□□□ -1.88
HPR1YDR138W BUB2P26448 306 aaPredicted RBP3.32□□□□□ -1.88
HPR1YDR138W SEC17P32602 292 aa3.32□□□□□ -1.88
HPR1YDR138W YBL059WP34224 193 aa3.32□□□□□ -1.88
HPR1YDR138W UTP30P36144 274 aaKnown RBP3.32□□□□□ -1.88
HPR1YDR138W YHL044WP38727 235 aa3.32□□□□□ -1.88
HPR1YDR138W TRM12Q04235 462 aa3.32□□□□□ -1.88
HPR1YDR138W SUE1Q06524 206 aa3.32□□□□□ -1.88
HPR1YDR138W YCR075W-AQ3E830 75 aa3.32□□□□□ -1.88
HPR1YDR138W YCF1P39109 1515 aaKnown RBP3.32□□□□□ -1.88
HPR1YDR138W SSK2P53599 1579 aa3.32□□□□□ -1.88
HPR1YDR138W RSF2P46974 1380 aa3.32□□□□□ -1.88
HPR1YDR138W NSE4P43124 402 aa3.32□□□□□ -1.88
HPR1YDR138W CRZ1P53968 678 aa3.32□□□□□ -1.88
HPR1YDR138W HNT1Q04344 158 aaKnown RBP3.32□□□□□ -1.88
HPR1YDR138W CNL1Q06333 122 aa3.32□□□□□ -1.88
HPR1YDR138W GEP5Q12393 293 aa3.32□□□□□ -1.88
HPR1YDR138W TFC7Q12415 435 aa3.32□□□□□ -1.88
HPR1YDR138W REP2P03872 296 aa3.31□□□□□ -1.88
HPR1YDR138W SPS18P32572 300 aa3.31□□□□□ -1.88
HPR1YDR138W PAN3P36102 679 aaPredicted RBP3.31□□□□□ -1.88
HPR1YDR138W POP8P38208 133 aa3.31□□□□□ -1.88
HPR1YDR138W YGP1P38616 354 aaKnown RBP3.31□□□□□ -1.88
HPR1YDR138W SNU13P39990 126 aaKnown RBP3.31□□□□□ -1.88
HPR1YDR138W PRE6P40303 254 aaKnown RBP3.31□□□□□ -1.88
HPR1YDR138W XPT1P47165 209 aa3.31□□□□□ -1.88
HPR1YDR138W BRR6P53062 197 aa3.31□□□□□ -1.88
HPR1YDR138W HHO1P53551 258 aa3.31□□□□□ -1.88
HPR1YDR138W MRX11Q03079 207 aa3.31□□□□□ -1.88
HPR1YDR138W GOT1Q03554 138 aa3.31□□□□□ -1.88
HPR1YDR138W RRS1Q08746 203 aaKnown RBP3.31□□□□□ -1.88
HPR1YDR138W THO2P53552 1597 aaKnown RBP3.31□□□□□ -1.88
HPR1YDR138W YKR104WP0CE69 306 aa3.31□□□□□ -1.88
HPR1YDR138W BGL2P15703 313 aaKnown RBP3.31□□□□□ -1.88
HPR1YDR138W SFK1P35735 353 aa3.31□□□□□ -1.88
HPR1YDR138W SHE2P36068 246 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
HPR1YDR138W SMP1P38128 452 aa3.31□□□□□ -1.88
HPR1YDR138W MRP21P38175 177 aa3.31□□□□□ -1.88
HPR1YDR138W KRE29P40026 464 aa3.31□□□□□ -1.88
HPR1YDR138W AYR1P40471 297 aa3.31□□□□□ -1.88
HPR1YDR138W IRC18P47056 224 aa3.31□□□□□ -1.88
HPR1YDR138W OST3P48439 350 aa3.31□□□□□ -1.88
HPR1YDR138W YLR152CP54072 576 aa3.31□□□□□ -1.88
HPR1YDR138W ELC1Q03071 99 aa3.31□□□□□ -1.88
HPR1YDR138W IRC25Q07951 179 aa3.31□□□□□ -1.88
HPR1YDR138W YPR202WQ08993 238 aa3.31□□□□□ -1.88
HPR1YDR138W YOL085CQ99345 113 aa3.31□□□□□ -1.88
HPR1YDR138W TY1B-HO13535 1793 aa3.31□□□□□ -1.88
HPR1YDR138W GEA1P47102 1408 aaPredicted RBP3.3□□□□□ -1.88
HPR1YDR138W STP22P25604 385 aa3.3□□□□□ -1.88
HPR1YDR138W RPB9P27999 122 aa3.3□□□□□ -1.88
HPR1YDR138W YOR062CP36025 268 aa3.3□□□□□ -1.88
HPR1YDR138W FMP46P36141 133 aaKnown RBP3.3□□□□□ -1.88
HPR1YDR138W CUE1P38428 203 aa3.3□□□□□ -1.88
HPR1YDR138W DOG1P38774 246 aa3.3□□□□□ -1.88
HPR1YDR138W DIE2P50076 525 aa3.3□□□□□ -1.88
HPR1YDR138W HSK3P69852 69 aa3.3□□□□□ -1.88
HPR1YDR138W MAK3Q03503 176 aa3.3□□□□□ -1.88
HPR1YDR138W AIM36Q03798 255 aa3.3□□□□□ -1.88
HPR1YDR138W SPG4Q04438 115 aa3.3□□□□□ -1.88
HPR1YDR138W YDR115WQ04598 105 aa3.3□□□□□ -1.88
HPR1YDR138W ECM19Q06011 112 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms