RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C YHR140WP38842 239 aa-0.06□□□□□ -2.42
SSS1YDR086C TVP23P38962 199 aa-0.06□□□□□ -2.42
SSS1YDR086C YMR141CP40211 102 aa-0.06□□□□□ -2.42
SSS1YDR086C MOB1P40484 314 aa-0.06□□□□□ -2.42
SSS1YDR086C DCV1P43595 202 aa-0.06□□□□□ -2.42
SSS1YDR086C APS3P47064 194 aa-0.06□□□□□ -2.42
SSS1YDR086C YJR015WP47090 510 aa-0.06□□□□□ -2.42
SSS1YDR086C UBC12P52491 188 aa-0.06□□□□□ -2.42
SSS1YDR086C YGL230CP53074 147 aa-0.06□□□□□ -2.42
SSS1YDR086C NOP19P53317 196 aaPredicted RBP-0.06□□□□□ -2.42
SSS1YDR086C DAD4P69851 72 aa-0.06□□□□□ -2.42
SSS1YDR086C VPS71Q03433 280 aa-0.06□□□□□ -2.42
SSS1YDR086C YMR295CQ03559 197 aa-0.06□□□□□ -2.42
SSS1YDR086C YNG1Q08465 219 aa-0.06□□□□□ -2.42
SSS1YDR086C FIT2Q08906 153 aa-0.06□□□□□ -2.42
SSS1YDR086C YOR342CQ12182 319 aa-0.06□□□□□ -2.42
SSS1YDR086C PST2Q12335 198 aaKnown RBP-0.06□□□□□ -2.42
SSS1YDR086C MED4Q12343 284 aa-0.06□□□□□ -2.42
SSS1YDR086C RIB3Q99258 208 aa-0.06□□□□□ -2.42
SSS1YDR086C ODC2Q99297 307 aa-0.06□□□□□ -2.42
SSS1YDR086C LAA1P39526 2014 aa-0.06□□□□□ -2.42
SSS1YDR086C UBR1P19812 1950 aa-0.06□□□□□ -2.42
SSS1YDR086C URB1P34241 1764 aaKnown RBP-0.06□□□□□ -2.42
SSS1YDR086C YIL177CP40434 1758 aa-0.06□□□□□ -2.42
SSS1YDR086C YJL225CP40889 1758 aa-0.06□□□□□ -2.42
SSS1YDR086C CFT1Q06632 1357 aaKnown RBP-0.06□□□□□ -2.42
SSS1YDR086C MSF1P08425 469 aa-0.07□□□□□ -2.42
SSS1YDR086C DDR48P18899 430 aaKnown RBP-0.07□□□□□ -2.42
SSS1YDR086C PHO13P19881 312 aa-0.07□□□□□ -2.42
SSS1YDR086C RPO26P20435 155 aa-0.07□□□□□ -2.42
SSS1YDR086C SPO13P23624 291 aa-0.07□□□□□ -2.42
SSS1YDR086C OCH1P31755 480 aa-0.07□□□□□ -2.42
SSS1YDR086C RPA12P32529 125 aaKnown RBP-0.07□□□□□ -2.42
SSS1YDR086C SEC17P32602 292 aa-0.07□□□□□ -2.42
SSS1YDR086C YBL010CP32788 280 aa-0.07□□□□□ -2.42
SSS1YDR086C APS1P35181 156 aa-0.07□□□□□ -2.42
SSS1YDR086C YKR070WP36151 352 aaKnown RBP-0.07□□□□□ -2.42
SSS1YDR086C ETR1P38071 380 aa-0.07□□□□□ -2.42
SSS1YDR086C YHL037CP38733 133 aa-0.07□□□□□ -2.42
SSS1YDR086C YAR064WP39563 99 aa-0.07□□□□□ -2.42
SSS1YDR086C PDS1P40316 373 aaPredicted RBP-0.07□□□□□ -2.42
SSS1YDR086C MPM1P40364 252 aa-0.07□□□□□ -2.42
SSS1YDR086C GLC8P41818 229 aa-0.07□□□□□ -2.42
SSS1YDR086C GLR1P41921 483 aaKnown RBP-0.07□□□□□ -2.42
SSS1YDR086C MVB12P42939 101 aa-0.07□□□□□ -2.42
SSS1YDR086C SKI6P46948 246 aaPredicted RBP-0.07□□□□□ -2.42
SSS1YDR086C ALB1P47019 175 aaPredicted RBP-0.07□□□□□ -2.42
SSS1YDR086C AIM25P47140 327 aa-0.07□□□□□ -2.42
SSS1YDR086C SOL1P50278 321 aa-0.07□□□□□ -2.42
SSS1YDR086C NUP84P52891 726 aa-0.07□□□□□ -2.42
SSS1YDR086C THG1P53215 237 aaKnown RBP-0.07□□□□□ -2.42
SSS1YDR086C MPC3P53311 146 aa-0.07□□□□□ -2.42
SSS1YDR086C YNL134CP53912 376 aaKnown RBP-0.07□□□□□ -2.42
SSS1YDR086C LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.07□□□□□ -2.42not detected
SSS1YDR086C YKR005CQ02203 525 aa-0.07□□□□□ -2.42
SSS1YDR086C FMN1Q03778 218 aa-0.07□□□□□ -2.42
SSS1YDR086C YDR249CQ03787 373 aa-0.07□□□□□ -2.42
SSS1YDR086C RNH202Q05635 350 aa-0.07□□□□□ -2.42
SSS1YDR086C KEI1Q06346 221 aa-0.07□□□□□ -2.42
SSS1YDR086C PRP11Q07350 266 aaPredicted RBP-0.07□□□□□ -2.42
SSS1YDR086C MCP1Q12106 302 aa-0.07□□□□□ -2.42
SSS1YDR086C GET4Q12125 312 aa-0.07□□□□□ -2.42
SSS1YDR086C RRP36Q12481 300 aaPredicted RBP-0.07□□□□□ -2.42
SSS1YDR086C YLR307C-AQ3E825 87 aa-0.07□□□□□ -2.42
SSS1YDR086C YHR213W-BQ8TGK1 99 aa-0.07□□□□□ -2.42
SSS1YDR086C YFR032C-BQ8TGU2 87 aa-0.07□□□□□ -2.42
SSS1YDR086C YRF1-3P0CX14 1859 aa-0.07□□□□□ -2.42
SSS1YDR086C YRF1-7P0CX15 1859 aa-0.07□□□□□ -2.42
SSS1YDR086C IKI3Q06706 1349 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C COX8P04039 78 aa-0.08□□□□□ -2.42
SSS1YDR086C KIN28P06242 306 aa-0.08□□□□□ -2.42
SSS1YDR086C SPT3P06844 337 aa-0.08□□□□□ -2.42
SSS1YDR086C BCY1P07278 416 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C RPL27AP0C2H6 136 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C TCP1P12612 559 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C URA5P13298 226 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C STE18P18852 110 aa-0.08□□□□□ -2.42
SSS1YDR086C ATP15P21306 62 aa-0.08□□□□□ -2.42
SSS1YDR086C MAG1P22134 296 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C MAK31P23059 88 aa-0.08□□□□□ -2.42
SSS1YDR086C YCR001WP25347 104 aa-0.08□□□□□ -2.42
SSS1YDR086C PPA2P28239 310 aa-0.08□□□□□ -2.42
SSS1YDR086C AHT1P29589 182 aa-0.08□□□□□ -2.42
SSS1YDR086C RIB7P33312 244 aa-0.08□□□□□ -2.42
SSS1YDR086C MSN4P33749 630 aa-0.08□□□□□ -2.42
SSS1YDR086C TAF14P35189 244 aa-0.08□□□□□ -2.42
SSS1YDR086C SFK1P35735 353 aa-0.08□□□□□ -2.42
SSS1YDR086C SHB17P36136 271 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C UTP30P36144 274 aaKnown RBP-0.08□□□□□ -2.42
SSS1YDR086C PAM17P36147 197 aa-0.08□□□□□ -2.42
SSS1YDR086C MRPL24P36525 258 aaPredicted RBP-0.08□□□□□ -2.42
SSS1YDR086C ATG8P38182 117 aaRIP-Chip data-0.08□□□□□ -2.42not detected
SSS1YDR086C SLM6P38343 150 aa-0.08□□□□□ -2.42
SSS1YDR086C RTR1P40084 226 aaPredicted RBP-0.08□□□□□ -2.42
SSS1YDR086C YPL073CP40323 161 aa-0.08□□□□□ -2.42
SSS1YDR086C SER2P42941 309 aa-0.08□□□□□ -2.42
SSS1YDR086C NSE4P43124 402 aa-0.08□□□□□ -2.42
SSS1YDR086C YFL051CP43552 160 aa-0.08□□□□□ -2.42
SSS1YDR086C HOC1P47124 396 aa-0.08□□□□□ -2.42
SSS1YDR086C CCC1P47818 322 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 294.1 ms