RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C YJL218WP40892 196 aaKnown RBP3.97□□□□□ -1.77
CDC48YDL126C SFH5P47008 294 aa3.97□□□□□ -1.77
CDC48YDL126C DAN1P47178 298 aa3.97□□□□□ -1.77
CDC48YDL126C YNL184CP53876 108 aa3.97□□□□□ -1.77
CDC48YDL126C TDA7P53882 636 aaPredicted RBP3.97□□□□□ -1.77
CDC48YDL126C YLR460CP54007 376 aa3.97□□□□□ -1.77
CDC48YDL126C YPL077CQ02831 240 aa3.97□□□□□ -1.77
CDC48YDL126C ELC1Q03071 99 aa3.97□□□□□ -1.77
CDC48YDL126C FIT1Q04433 528 aa3.97□□□□□ -1.77
CDC48YDL126C YTH1Q06102 208 aaPredicted RBP3.97□□□□□ -1.77
CDC48YDL126C YLR446WQ06204 433 aa3.97□□□□□ -1.77
CDC48YDL126C PEX27Q08580 376 aa3.97□□□□□ -1.77
CDC48YDL126C YGK3Q12222 375 aaPredicted RBP3.97□□□□□ -1.77
CDC48YDL126C MHF2Q3E829 80 aa3.97□□□□□ -1.77
CDC48YDL126C CPT1P17898 393 aa3.96□□□□□ -1.77
CDC48YDL126C MCK1P21965 375 aaKnown RBP3.96□□□□□ -1.77
CDC48YDL126C ERG9P29704 444 aa3.96□□□□□ -1.77
CDC48YDL126C CAT2P32796 670 aaKnown RBP3.96□□□□□ -1.77
CDC48YDL126C EMP24P32803 203 aaKnown RBP3.96□□□□□ -1.77
CDC48YDL126C MSN2P33748 704 aa3.96□□□□□ -1.77
CDC48YDL126C PHD1P36093 366 aa3.96□□□□□ -1.77
CDC48YDL126C YPC1P38298 316 aa3.96□□□□□ -1.77
CDC48YDL126C GGC1P38988 300 aa3.96□□□□□ -1.77
CDC48YDL126C SPR6Q01684 191 aa3.96□□□□□ -1.77
CDC48YDL126C SNO1Q03144 224 aa3.96□□□□□ -1.77
CDC48YDL126C DPP1Q05521 289 aa3.96□□□□□ -1.77
CDC48YDL126C NOC4Q06512 552 aaPredicted RBP3.96□□□□□ -1.77
CDC48YDL126C SUS1Q6WNK7 96 aa3.96□□□□□ -1.77
CDC48YDL126C CUP2P15315 225 aa3.96□□□□□ -1.78
CDC48YDL126C ERD1P16151 362 aa3.96□□□□□ -1.78
CDC48YDL126C SLM5P25345 492 aaKnown RBP3.96□□□□□ -1.78
CDC48YDL126C RPS2P25443 254 aaKnown RBP3.96□□□□□ -1.78
CDC48YDL126C YMC1P32331 307 aa3.96□□□□□ -1.78
CDC48YDL126C NTF2P33331 125 aaKnown RBP3.96□□□□□ -1.78
CDC48YDL126C SDH4P37298 181 aa3.96□□□□□ -1.78
CDC48YDL126C YBR220CP38318 560 aa3.96□□□□□ -1.78
CDC48YDL126C TRS20P38334 175 aa3.96□□□□□ -1.78
CDC48YDL126C AVT7P40501 490 aa3.96□□□□□ -1.78
CDC48YDL126C YGL235WP53071 178 aa3.96□□□□□ -1.78
CDC48YDL126C YDR391CQ04170 232 aa3.96□□□□□ -1.78
CDC48YDL126C YOL131WQ08270 108 aa3.96□□□□□ -1.78
CDC48YDL126C WTM1Q12363 437 aaKnown RBP3.96□□□□□ -1.78
CDC48YDL126C RKM5Q12367 367 aa3.96□□□□□ -1.78
CDC48YDL126C RPL9AP05738 191 aaKnown RBP3.95□□□□□ -1.78
CDC48YDL126C PHO2P07269 559 aa3.95□□□□□ -1.78
CDC48YDL126C RPS18AP0CX55 146 aaKnown RBP3.95□□□□□ -1.78
CDC48YDL126C RPS18BP0CX56 146 aaPredicted RBP3.95□□□□□ -1.78
CDC48YDL126C TIR1P10863 254 aa3.95□□□□□ -1.78
CDC48YDL126C ANB1P19211 157 aa3.95□□□□□ -1.78
CDC48YDL126C CKS1P20486 150 aaKnown RBP3.95□□□□□ -1.78
CDC48YDL126C TRX3P25372 127 aa3.95□□□□□ -1.78
CDC48YDL126C STP22P25604 385 aa3.95□□□□□ -1.78
CDC48YDL126C CBP4P37267 147 aa3.95□□□□□ -1.78
CDC48YDL126C RPL32P38061 130 aaKnown RBP3.95□□□□□ -1.78
CDC48YDL126C YBR063CP38083 404 aa3.95□□□□□ -1.78
CDC48YDL126C ATG8P38182 117 aaRIP-Chip data3.95□□□□□ -1.78not detected
CDC48YDL126C SIM1P40472 476 aa3.95□□□□□ -1.78
CDC48YDL126C RPL9BP51401 191 aaKnown RBP3.95□□□□□ -1.78
CDC48YDL126C YDR366CP87287 132 aa3.95□□□□□ -1.78
CDC48YDL126C APS2Q00381 147 aa3.95□□□□□ -1.78
CDC48YDL126C RSM23Q01163 450 aa3.95□□□□□ -1.78
CDC48YDL126C PLB3Q08108 686 aa3.95□□□□□ -1.78
CDC48YDL126C THP1Q08231 455 aa3.95□□□□□ -1.78
CDC48YDL126C FRE8Q12209 686 aa3.95□□□□□ -1.78
CDC48YDL126C ATG5Q12380 294 aa3.95□□□□□ -1.78
CDC48YDL126C STT4P37297 1900 aa3.95□□□□□ -1.78
CDC48YDL126C YPR096CO13587 100 aa3.95□□□□□ -1.78
CDC48YDL126C MSW1P04803 379 aa3.95□□□□□ -1.78
CDC48YDL126C SPT15P13393 240 aaKnown RBP3.95□□□□□ -1.78
CDC48YDL126C YKL102CP34249 101 aa3.95□□□□□ -1.78
CDC48YDL126C YAL037WP39728 267 aa3.95□□□□□ -1.78
CDC48YDL126C YIL067CP40514 678 aa3.95□□□□□ -1.78
CDC48YDL126C COQ5P49017 307 aa3.95□□□□□ -1.78
CDC48YDL126C SUN4P53616 420 aa3.95□□□□□ -1.78
CDC48YDL126C SHH3Q04487 196 aa3.95□□□□□ -1.78
CDC48YDL126C YMR315WQ04869 349 aaKnown RBP3.95□□□□□ -1.78
CDC48YDL126C ANT1Q06497 328 aa3.95□□□□□ -1.78
CDC48YDL126C FOL3Q12676 427 aaPredicted RBP3.95□□□□□ -1.78
CDC48YDL126C MDM35O60200 86 aa3.94□□□□□ -1.78
CDC48YDL126C TPI1P00942 248 aaKnown RBP3.94□□□□□ -1.78
CDC48YDL126C RAD6P06104 172 aa3.94□□□□□ -1.78
CDC48YDL126C PUT1P09368 476 aa3.94□□□□□ -1.78
CDC48YDL126C YBR121C-AP0C5L4 52 aa3.94□□□□□ -1.78
CDC48YDL126C PAU19P0CE85 124 aa3.94□□□□□ -1.78
CDC48YDL126C PAU21P0CE86 164 aa3.94□□□□□ -1.78
CDC48YDL126C PAU22P0CE87 164 aa3.94□□□□□ -1.78
CDC48YDL126C PAU3P25610 124 aa3.94□□□□□ -1.78
CDC48YDL126C IES6P32617 166 aa3.94□□□□□ -1.78
CDC48YDL126C ECM15P35195 104 aa3.94□□□□□ -1.78
CDC48YDL126C YEA6P39953 335 aa3.94□□□□□ -1.78
CDC48YDL126C GWT1P47026 490 aa3.94□□□□□ -1.78
CDC48YDL126C RPS12P48589 143 aaKnown RBP3.94□□□□□ -1.78
CDC48YDL126C GPI15P53961 229 aa3.94□□□□□ -1.78
CDC48YDL126C TPS1Q00764 495 aaKnown RBP3.94□□□□□ -1.78
CDC48YDL126C CYT2Q00873 224 aa3.94□□□□□ -1.78
CDC48YDL126C VPS28Q02767 242 aa3.94□□□□□ -1.78
CDC48YDL126C THI74Q04083 370 aa3.94□□□□□ -1.78
CDC48YDL126C LDS2Q08218 356 aa3.94□□□□□ -1.78
CDC48YDL126C RRG7Q08774 242 aaPredicted RBP3.94□□□□□ -1.78
CDC48YDL126C ORT1Q12375 292 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms