RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W USE1P53146 245 aa1.65□□□□□ -2.15
UBP1YDL122W MAL13P53338 473 aa1.65□□□□□ -2.15
UBP1YDL122W YNL095CP53932 642 aa1.65□□□□□ -2.15
UBP1YDL122W SEC13Q04491 297 aaKnown RBP1.65□□□□□ -2.15
UBP1YDL122W SME1Q12330 94 aaPredicted RBP1.65□□□□□ -2.15
UBP1YDL122W CMC2Q3E7A4 109 aa1.65□□□□□ -2.15
UBP1YDL122W YLR462WO13556 202 aa1.64□□□□□ -2.15
UBP1YDL122W RPC19P28000 142 aaKnown RBP1.64□□□□□ -2.15
UBP1YDL122W IDH1P28834 360 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
UBP1YDL122W QRI5P32344 111 aa1.64□□□□□ -2.15
UBP1YDL122W POP4P38336 279 aa1.64□□□□□ -2.15
UBP1YDL122W YHL049CP38722 271 aa1.64□□□□□ -2.15
UBP1YDL122W YND1P40009 630 aa1.64□□□□□ -2.15
UBP1YDL122W PRM5P40476 318 aa1.64□□□□□ -2.15
UBP1YDL122W HYR1P40581 163 aaKnown RBP1.64□□□□□ -2.15
UBP1YDL122W XPT1P47165 209 aa1.64□□□□□ -2.15
UBP1YDL122W ASI3P53983 676 aa1.64□□□□□ -2.15
UBP1YDL122W DPP1Q05521 289 aa1.64□□□□□ -2.15
UBP1YDL122W MHR1Q06630 226 aa1.64□□□□□ -2.15
UBP1YDL122W YOL019WQ08157 551 aa1.64□□□□□ -2.15
UBP1YDL122W RFM1Q12192 310 aa1.64□□□□□ -2.15
UBP1YDL122W SNU23Q12368 194 aaPredicted RBP1.64□□□□□ -2.15
UBP1YDL122W YHR214C-EQ8TGK0 99 aa1.64□□□□□ -2.15
UBP1YDL122W HTB1P02293 131 aaKnown RBP1.64□□□□□ -2.15
UBP1YDL122W HTB2P02294 131 aa1.64□□□□□ -2.15
UBP1YDL122W REP2P03872 296 aa1.64□□□□□ -2.15
UBP1YDL122W IFM1P25038 676 aa1.64□□□□□ -2.15
UBP1YDL122W CPR4P25334 318 aa1.64□□□□□ -2.15
UBP1YDL122W GIT1P25346 518 aa1.64□□□□□ -2.15
UBP1YDL122W HOM6P31116 359 aaKnown RBP1.64□□□□□ -2.15
UBP1YDL122W ANR2P36090 516 aaPredicted RBP1.64□□□□□ -2.15
UBP1YDL122W LSM12P38828 187 aaKnown RBP1.64□□□□□ -2.15
UBP1YDL122W SMB1P40018 196 aaKnown RBP1.64□□□□□ -2.15
UBP1YDL122W VPS55P47111 140 aa1.64□□□□□ -2.15
UBP1YDL122W COS10P52924 374 aa1.64□□□□□ -2.15
UBP1YDL122W YPS5P53057 165 aa1.64□□□□□ -2.15
UBP1YDL122W SCW4P53334 386 aaKnown RBP1.64□□□□□ -2.15
UBP1YDL122W RCF2P53721 224 aa1.64□□□□□ -2.15
UBP1YDL122W FSH2Q05015 223 aa1.64□□□□□ -2.15
UBP1YDL122W PEX30Q06169 523 aa1.64□□□□□ -2.15
UBP1YDL122W DAS2Q12084 232 aa1.64□□□□□ -2.15
UBP1YDL122W YCT1Q12235 531 aa1.64□□□□□ -2.15
UBP1YDL122W MRPL20P22354 195 aaPredicted RBP1.63□□□□□ -2.15
UBP1YDL122W YCR043CP25361 127 aa1.63□□□□□ -2.15
UBP1YDL122W YCR090CP25654 182 aaKnown RBP1.63□□□□□ -2.15
UBP1YDL122W PEX3P28795 441 aa1.63□□□□□ -2.15
UBP1YDL122W ATP7P30902 174 aa1.63□□□□□ -2.15
UBP1YDL122W LDS1P31379 325 aa1.63□□□□□ -2.15
UBP1YDL122W HYM1P32464 399 aa1.63□□□□□ -2.15
UBP1YDL122W SRL3P36167 246 aa1.63□□□□□ -2.15
UBP1YDL122W EGD2P38879 174 aaKnown RBP1.63□□□□□ -2.15
UBP1YDL122W PET8P38921 284 aa1.63□□□□□ -2.15
UBP1YDL122W AIM2P39721 246 aa1.63□□□□□ -2.15
UBP1YDL122W YNL208WP40159 199 aaKnown RBP1.63□□□□□ -2.15
UBP1YDL122W YJL213WP40896 331 aa1.63□□□□□ -2.15
UBP1YDL122W YJL016WP47072 561 aa1.63□□□□□ -2.15
UBP1YDL122W GET1P53192 235 aa1.63□□□□□ -2.15
UBP1YDL122W MSO1P53604 210 aaKnown RBP1.63□□□□□ -2.15
UBP1YDL122W CWC25P53854 179 aaKnown RBP1.63□□□□□ -2.15
UBP1YDL122W YDR476CQ03362 224 aa1.63□□□□□ -2.15
UBP1YDL122W GIM5Q04493 163 aa1.63□□□□□ -2.15
UBP1YDL122W YPR098CQ06089 161 aa1.63□□□□□ -2.15
UBP1YDL122W SEC10Q06245 871 aa1.63□□□□□ -2.15
UBP1YDL122W MCH1Q07376 486 aa1.63□□□□□ -2.15
UBP1YDL122W ATP16Q12165 160 aa1.63□□□□□ -2.15
UBP1YDL122W HHF1P02309 103 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W PET494P07390 489 aaPredicted RBP1.62□□□□□ -2.15
UBP1YDL122W CAT2P32796 670 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W JEN1P36035 616 aa1.62□□□□□ -2.15
UBP1YDL122W MDM31P38880 579 aa1.62□□□□□ -2.15
UBP1YDL122W SEC72P39742 193 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W YJR085CP47131 105 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W PAC10P48363 199 aa1.62□□□□□ -2.15
UBP1YDL122W TPN1P53099 579 aa1.62□□□□□ -2.15
UBP1YDL122W NOP19P53317 196 aaPredicted RBP1.62□□□□□ -2.15
UBP1YDL122W YHC1Q05900 231 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W YPL119C-AQ3E751 87 aa1.62□□□□□ -2.15
UBP1YDL122W YDR157WA0A023PZE8 133 aa1.62□□□□□ -2.15
UBP1YDL122W RPL28P02406 149 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W CUP2P15315 225 aa1.62□□□□□ -2.15
UBP1YDL122W CDC10P25342 322 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W ALK2P32789 676 aaPredicted RBP1.62□□□□□ -2.15
UBP1YDL122W FZO1P38297 855 aa1.62□□□□□ -2.15
UBP1YDL122W CHL4P38907 458 aa1.62□□□□□ -2.15
UBP1YDL122W BMT5P40493 336 aa1.62□□□□□ -2.15
UBP1YDL122W YFR057WP43625 151 aa1.62□□□□□ -2.15
UBP1YDL122W DIA1P54005 336 aa1.62□□□□□ -2.15
UBP1YDL122W INP1Q03694 420 aa1.62□□□□□ -2.15
UBP1YDL122W YML018CQ03730 393 aa1.62□□□□□ -2.15
UBP1YDL122W FAR8Q05040 523 aa1.62□□□□□ -2.15
UBP1YDL122W ARC18Q05933 178 aaKnown RBP1.62□□□□□ -2.15
UBP1YDL122W SFM1Q12314 213 aa1.62□□□□□ -2.15
UBP1YDL122W JLP1Q12358 412 aa1.62□□□□□ -2.15
UBP1YDL122W ATO3Q12359 275 aa1.62□□□□□ -2.15
UBP1YDL122W YOR343CQ12484 108 aa1.62□□□□□ -2.15
UBP1YDL122W AST1P35183 429 aa1.61□□□□□ -2.15
UBP1YDL122W TRM5P38793 499 aa1.61□□□□□ -2.15
UBP1YDL122W IKI1P38874 309 aa1.61□□□□□ -2.15
UBP1YDL122W YFL012WP43580 148 aa1.61□□□□□ -2.15
UBP1YDL122W MIC26P50087 233 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms