RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeastyeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC3YAL011W HNT3Q08702 217 aa3.98□□□□□ -1.77
SWC3YAL011W SME1Q12330 94 aaPredicted RBP3.98□□□□□ -1.77
SWC3YAL011W YOR343CQ12484 108 aa3.98□□□□□ -1.77
SWC3YAL011W RPL28P02406 149 aaKnown RBP3.97□□□□□ -1.77
SWC3YAL011W TRP4P07285 380 aaPredicted RBP3.97□□□□□ -1.77
SWC3YAL011W SGA1P08019 549 aa3.97□□□□□ -1.77
SWC3YAL011W RPL31AP0C2H8 113 aaKnown RBP3.97□□□□□ -1.77
SWC3YAL011W CPT1P17898 393 aa3.97□□□□□ -1.77
SWC3YAL011W GEP4P38812 185 aa3.97□□□□□ -1.77
SWC3YAL011W OXA1P39952 402 aa3.97□□□□□ -1.77
SWC3YAL011W GTF1P53260 183 aaPredicted RBP3.97□□□□□ -1.77
SWC3YAL011W DUG3P53871 357 aa3.97□□□□□ -1.77
SWC3YAL011W SNX41Q04053 625 aa3.97□□□□□ -1.77
SWC3YAL011W ARC18Q05933 178 aaKnown RBP3.97□□□□□ -1.77
SWC3YAL011W HEM25Q07534 307 aa3.97□□□□□ -1.77
SWC3YAL011W FEX1Q08913 375 aa3.97□□□□□ -1.77
SWC3YAL011W YCT1Q12235 531 aa3.97□□□□□ -1.77
SWC3YAL011W ORT1Q12375 292 aa3.97□□□□□ -1.77
SWC3YAL011W ODC2Q99297 307 aa3.97□□□□□ -1.77
SWC3YAL011W NHP6AP11632 93 aaKnown RBP3.96□□□□□ -1.77
SWC3YAL011W MRP17P28778 131 aa3.96□□□□□ -1.77
SWC3YAL011W CAM1P29547 415 aaKnown RBP3.96□□□□□ -1.77
SWC3YAL011W ZRT1P32804 376 aa3.96□□□□□ -1.77
SWC3YAL011W YKL075CP36083 450 aa3.96□□□□□ -1.77
SWC3YAL011W YCH1P42937 148 aa3.96□□□□□ -1.77
SWC3YAL011W GPI14P47088 403 aaKnown RBP3.96□□□□□ -1.77
SWC3YAL011W YGR151CP53287 111 aa3.96□□□□□ -1.77
SWC3YAL011W RSM27P53305 110 aa3.96□□□□□ -1.77
SWC3YAL011W PET191Q02772 108 aa3.96□□□□□ -1.77
SWC3YAL011W RFU1Q08003 200 aa3.96□□□□□ -1.77
SWC3YAL011W YLR050CQ12155 161 aaKnown RBP3.96□□□□□ -1.77
SWC3YAL011W POM33Q12164 279 aa3.96□□□□□ -1.77
SWC3YAL011W TAD3Q9URQ3 322 aa3.96□□□□□ -1.77
SWC3YAL011W MAG1P22134 296 aaKnown RBP3.96□□□□□ -1.78
SWC3YAL011W POF1P25576 258 aa3.96□□□□□ -1.78
SWC3YAL011W FLO10P36170 1169 aa3.96□□□□□ -1.78
SWC3YAL011W NAT2P37293 288 aa3.96□□□□□ -1.78
SWC3YAL011W PTI1P39927 425 aaPredicted RBP3.96□□□□□ -1.78
SWC3YAL011W SYS1P41544 203 aa3.96□□□□□ -1.78
SWC3YAL011W KEG1P43614 200 aa3.96□□□□□ -1.78
SWC3YAL011W MST27P53176 234 aa3.96□□□□□ -1.78
SWC3YAL011W POP6P53218 158 aa3.96□□□□□ -1.78
SWC3YAL011W MTM1P53320 366 aa3.96□□□□□ -1.78
SWC3YAL011W YLR152CP54072 576 aa3.96□□□□□ -1.78
SWC3YAL011W DYN2Q02647 92 aa3.96□□□□□ -1.78
SWC3YAL011W YML108WQ03759 105 aa3.96□□□□□ -1.78
SWC3YAL011W IRC19Q07843 230 aa3.96□□□□□ -1.78
SWC3YAL011W ATP14Q12349 124 aa3.96□□□□□ -1.78
SWC3YAL011W PHO2P07269 559 aa3.95□□□□□ -1.78
SWC3YAL011W RPS28BP0C0X0 67 aaKnown RBP3.95□□□□□ -1.78
SWC3YAL011W AIM17P23180 465 aaKnown RBP3.95□□□□□ -1.78
SWC3YAL011W SRY1P36007 326 aa3.95□□□□□ -1.78
SWC3YAL011W DLS1P40366 167 aa3.95□□□□□ -1.78
SWC3YAL011W AVT7P40501 490 aa3.95□□□□□ -1.78
SWC3YAL011W YJR012CP47087 207 aa3.95□□□□□ -1.78
SWC3YAL011W YMR166CQ03829 368 aa3.95□□□□□ -1.78
SWC3YAL011W MRX9Q07349 420 aaKnown RBP3.95□□□□□ -1.78
SWC3YAL011W MIM1Q08176 113 aa3.95□□□□□ -1.78
SWC3YAL011W SYC1Q08553 188 aaPredicted RBP3.95□□□□□ -1.78
SWC3YAL011W SRL2Q12020 392 aa3.95□□□□□ -1.78
SWC3YAL011W USV1Q12132 391 aa3.95□□□□□ -1.78
SWC3YAL011W USB1Q12208 290 aaKnown RBP3.95□□□□□ -1.78
SWC3YAL011W HMS1Q12398 434 aa3.95□□□□□ -1.78
SWC3YAL011W RPS28AQ3E7X9 67 aaPredicted RBP3.95□□□□□ -1.78
SWC3YAL011W CSF1Q12150 2958 aa3.95□□□□□ -1.78
SWC3YAL011W QRI5P32344 111 aa3.94□□□□□ -1.78
SWC3YAL011W SNC2P33328 115 aa3.94□□□□□ -1.78
SWC3YAL011W UTH1P36135 365 aa3.94□□□□□ -1.78
SWC3YAL011W YIL067CP40514 678 aa3.94□□□□□ -1.78
SWC3YAL011W YJL016WP47072 561 aa3.94□□□□□ -1.78
SWC3YAL011W BXI1P48558 297 aa3.94□□□□□ -1.78
SWC3YAL011W ALG13P53178 202 aa3.94□□□□□ -1.78
SWC3YAL011W SCW4P53334 386 aaKnown RBP3.94□□□□□ -1.78
SWC3YAL011W SMM1P53720 384 aaKnown RBP3.94□□□□□ -1.78
SWC3YAL011W NOC4Q06512 552 aaPredicted RBP3.94□□□□□ -1.78
SWC3YAL011W CTR3Q06686 241 aa3.94□□□□□ -1.78
SWC3YAL011W YOR385WQ08909 290 aa3.94□□□□□ -1.78
SWC3YAL011W FEX2Q08991 375 aa3.94□□□□□ -1.78
SWC3YAL011W YOP1Q12402 180 aa3.94□□□□□ -1.78
SWC3YAL011W CTA1P15202 515 aa3.94□□□□□ -1.78
SWC3YAL011W PMT2P31382 759 aa3.94□□□□□ -1.78
SWC3YAL011W PAN3P36102 679 aaPredicted RBP3.94□□□□□ -1.78
SWC3YAL011W LAG1P38703 411 aa3.94□□□□□ -1.78
SWC3YAL011W GRE3P38715 327 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SWC3YAL011W PAC2P39937 518 aa3.94□□□□□ -1.78
SWC3YAL011W YMR144WP40214 342 aaKnown RBP3.94□□□□□ -1.78
SWC3YAL011W SWM2P40342 146 aa3.94□□□□□ -1.78
SWC3YAL011W YIA6P40556 373 aa3.94□□□□□ -1.78
SWC3YAL011W OST3P48439 350 aa3.94□□□□□ -1.78
SWC3YAL011W UBC12P52491 188 aa3.94□□□□□ -1.78
SWC3YAL011W MSO1P53604 210 aaKnown RBP3.94□□□□□ -1.78
SWC3YAL011W TRS23Q03784 219 aa3.94□□□□□ -1.78
SWC3YAL011W RDL2Q08742 149 aaKnown RBP3.94□□□□□ -1.78
SWC3YAL011W YDL009CQ12210 107 aa3.94□□□□□ -1.78
SWC3YAL011W SNU23Q12368 194 aaPredicted RBP3.94□□□□□ -1.78
SWC3YAL011W Q0144Q9ZZW2 109 aa3.94□□□□□ -1.78
SWC3YAL011W YAL064W-BO13512 126 aa3.93□□□□□ -1.78
SWC3YAL011W MSW1P04803 379 aa3.93□□□□□ -1.78
SWC3YAL011W SCO1P23833 295 aa3.93□□□□□ -1.78
SWC3YAL011W PCL1P24867 279 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms