RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CACNA1GO43497 2377 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 CCDC169A6NNP5 214 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 NRG2O14511 850 aaPredicted RBP8.56□□□□□ -1.04
CLK1-215ENST00000621181 LRP3O75074 770 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 RETP07949 1114 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 MYL4P12829 197 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 TDGF1P13385 188 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 VIPR2P41587 438 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 MCM2P49736 904 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 TWF1Q12792 350 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 ST3GAL2Q16842 350 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 TPGS2Q68CL5 300 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 ZNF687Q8N1G0 1237 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 NECAB1Q8N987 351 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 ZSCAN18Q8TBC5 510 aaPredicted RBP8.56□□□□□ -1.04
CLK1-215ENST00000621181 KIFAP3Q92845 792 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 INTS4Q96HW7 963 aaKnown RBP8.56□□□□□ -1.04
CLK1-215ENST00000621181 CHAMP1Q96JM3 812 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 ZSWIM3Q96MP5 696 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 TCHPQ9BT92 498 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 BHMT2Q9H2M3 363 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 TRPV5Q9NQA5 729 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 SEMA4GQ9NTN9 838 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 FBXL5Q9UKA1 691 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 TNFSF13BQ9Y275 285 aa8.56□□□□□ -1.04
CLK1-215ENST00000621181 LAMA1P25391 3075 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 GOLGA6L22H0YM25 854 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 CITO14578 2027 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 SLC30A4O14863 429 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 SEC24AO95486 1093 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 OR52Z1P0C646 297 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 CPB1P15086 417 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 GJA1P17302 382 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 GRM5P41594 1212 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 SATB1Q01826 763 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 DMP1Q13316 513 aaPredicted RBP8.55□□□□□ -1.04
CLK1-215ENST00000621181 SAFBQ15424 915 aaKnown RBP eCLIP8.55□□□□□ -1.04
CLK1-215ENST00000621181 ZNF280DQ6N043 979 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 PRR23CQ6ZRP0 262 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 ZFHX4Q86UP3 3567 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 YAF2Q8IY57 180 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 LEMD2Q8NC56 503 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 GPT2Q8TD30 523 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 CSGALNACT1Q8TDX6 532 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 GTF3C6Q969F1 213 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 ACAP3Q96P50 834 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 CDT1Q9H211 546 aa8.55□□□□□ -1.04
CLK1-215ENST00000621181 PHLPP2Q6ZVD8 1323 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 SLC38A8A6NNN8 435 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 HEPACAM2A8MVW5 462 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 CHRNB1P11230 501 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 HARSP12081 509 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 RPL9P32969 192 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 CCT6AP40227 531 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 NEK4P51957 841 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 KPNA1P52294 538 aaPredicted RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 PEX3P56589 373 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 LRRC32Q14392 662 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 TEAD2Q15562 447 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 ME3Q16798 604 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 XKR4Q5GH76 650 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 HEATR6Q6AI08 1181 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 MCTP1Q6DN14 999 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 C1orf228Q6PIY5 440 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 ALKAL1Q6UXT8 129 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 MFSD6LQ8IWD5 586 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 SPEM1Q8N4L4 309 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 NSUN7Q8NE18 718 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 APPL2Q8NEU8 664 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 C18orf25Q96B23 403 aaPredicted RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 ZMAT2Q96NC0 199 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 ACO2Q99798 780 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 MRPL4Q9BYD3 311 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 CEP72Q9P209 647 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 AFF4Q9UHB7 1163 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 CHURC1-FNTBB4DL54 471 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 JAK2O60674 1132 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 MUTP22033 750 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 MARCKSP29966 332 aaPredicted RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 CNR2P34972 360 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 NPTX2P47972 431 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 FNTBP49356 437 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 GAS6Q14393 721 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 ZNF174Q15697 407 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 CSRP2Q16527 193 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 CEP68Q76N32 757 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 DDX1Q92499 740 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 E2F7Q96AV8 911 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 MSANTD3Q96H12 275 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 SUSD3Q96L08 255 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 TARS2Q9BW92 718 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 GPR88Q9GZN0 384 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 TRPV4Q9HBA0 871 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 RBM12Q9NTZ6 932 aaKnown RBP8.54□□□□□ -1.04
CLK1-215ENST00000621181 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
CLK1-215ENST00000621181 MAFFQ9ULX9 164 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms