RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 NT5C1BQ96P26 610 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 CRACR2AQ9BSW2 395 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.57
SMAD4-214ENST00000592186 XYLT2Q9H1B5 865 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 GOLGA2P5Q9HBQ8 144 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 PLCB1Q9NQ66 1216 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 PUF60Q9UHX1 559 aaKnown RBP11.46□□□□□ -0.57
SMAD4-214ENST00000592186 ADAM28Q9UKQ2 775 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 DSEQ9UL01 958 aa11.46□□□□□ -0.57
SMAD4-214ENST00000592186 COL4A6Q14031 1691 aa11.46□□□□□ -0.58
SMAD4-214ENST00000592186 SF3B1O75533 1304 aaKnown RBP eCLIP11.45□□□□□ -0.587e-6■■■■■ 33.4
SMAD4-214ENST00000592186 LINC01553A4QN01 128 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 GRXCR1A8MXD5 290 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 HUS1O60921 280 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 CLSTN1O94985 981 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 SLC9A1P19634 815 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 AARSP49588 968 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 MFAP3P55082 362 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 YWHAEP62258 255 aaKnown RBP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 PLCB3Q01970 1234 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 GCNT1Q02742 428 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 KCNMA1Q12791 1236 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 BMS1Q14692 1282 aaKnown RBP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 SYCP1Q15431 976 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 PRPF38BQ5VTL8 546 aaKnown RBP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 DSTYKQ6XUX3 929 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 METTL23Q86XA0 190 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 SLC39A11Q8N1S5 342 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 TMEM86AQ8N2M4 240 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 APPL2Q8NEU8 664 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 ANP32BQ92688 251 aaKnown RBP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 TMEM169Q96HH4 297 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 MRFAP1L1Q96HT8 127 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 IGSF21Q96ID5 467 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 SUSD3Q96L08 255 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 TGS1Q96RS0 853 aaKnown RBP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 PAAF1Q9BRP4 392 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 OXCT2Q9BYC2 517 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 EDEM3Q9BZQ6 932 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 SLC28A3Q9HAS3 691 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 CYP3A43Q9HB55 503 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 APEX2Q9UBZ4 518 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 FBXL5Q9UKA1 691 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 PRG3Q9Y2Y8 225 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-214ENST00000592186 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■□□□□ 10.8
SMAD4-214ENST00000592186 SNX9Q9Y5X1 595 aa11.45□□□□□ -0.58
SMAD4-214ENST00000592186 C5orf67F2Z3F1 127 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 M0QZQ0 153 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 CYB561D2O14569 222 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 SYN3O14994 580 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 TEX33O43247 280 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 B4GALT3O60512 393 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 KIF4AO95239 1232 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 CA3P07451 260 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 ODC1P11926 461 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 ERVK-21P61565 698 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 NOP14P78316 857 aaKnown RBP11.44□□□□□ -0.58
SMAD4-214ENST00000592186 UBE3AQ05086 875 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 FIGNQ5HY92 759 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 KLHDC7AQ5VTJ3 777 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 SPECC1LQ69YQ0 1117 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 FAM109BQ6ICB4 259 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-214ENST00000592186 PDXDC1Q6P996 788 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 DDX53Q86TM3 631 aaKnown RBP11.44□□□□□ -0.58
SMAD4-214ENST00000592186 FMNL3Q8IVF7 1028 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 GPR65Q8IYL9 337 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 FAM84AQ96KN4 292 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 SENP8Q96LD8 212 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 MMS19Q96T76 1030 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 C11orf84Q9BUA3 381 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-214ENST00000592186 PBX4Q9BYU1 374 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 NIF3L1Q9GZT8 377 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 UBE2TQ9NPD8 197 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-214ENST00000592186 NXF1Q9UBU9 619 aaKnown RBP11.44□□□□□ -0.58
SMAD4-214ENST00000592186 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 LZTS1Q9Y250 596 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 SSX2IPQ9Y2D8 614 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 SIK3Q9Y2K2 1263 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 CITO14578 2027 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 ITIH6Q6UXX5 1313 aa11.44□□□□□ -0.58
SMAD4-214ENST00000592186 LCHNA4D1U4 455 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 PPEF2O14830 753 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 SPTLC1O15269 473 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 TACC1O75410 805 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 FGF18O76093 207 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 EFEMP2O95967 443 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 CYP11A1P05108 521 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 TPM1P09493 284 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 MYOGP15173 224 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 TRIM21P19474 475 aaKnown RBP11.43□□□□□ -0.58
SMAD4-214ENST00000592186 TYMPP19971 482 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 PBX1P40424 430 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 LHX1P48742 406 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 ZNF75DP51815 510 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 TAP1Q03518 808 aa11.43□□□□□ -0.58
SMAD4-214ENST00000592186 CUL2Q13617 745 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms