RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, human

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RGMA-208	ENST00000556658	MAGEA1	P43355	309 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	TNNC1	P63316	161 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	PLEKHG4	Q58EX7	1191 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	C9orf57	Q5W0N0	161 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	TMEM270	Q6UE05	265 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	NECAB2	Q7Z6G3	386 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	SLC47A2	Q86VL8	602 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	APBB2	Q92870	758 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	RSAD1	Q9HA92	442 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	CNTN6	Q9UQ52	1028 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	PTGES	O14684	152 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	CYP11B1	P15538	503 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	ASPA	P45381	313 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	TMEM130	Q8N3G9	435 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	EPS8L1	Q8TE68	723 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	C16orf45	Q96MC5	204 aa	Predicted RBP	21.32	■■□□□ 1
RGMA-208	ENST00000556658	PPP1R10	Q96QC0	940 aa	Known RBP	21.32	■■□□□ 1
RGMA-208	ENST00000556658	TSPYL2	Q9H2G4	693 aa	Predicted RBP	21.32	■■□□□ 1
RGMA-208	ENST00000556658	CYP3A43	Q9HB55	503 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	LZTFL1	Q9NQ48	299 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	CISH	Q9NSE2	258 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	POLI	Q9UNA4	740 aa		21.32	■■□□□ 1
RGMA-208	ENST00000556658	ANO9	A1A5B4	782 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658		C9IYK1	514 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	WEE2	P0C1S8	567 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	PNPLA4	P41247	253 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	VAV2	P52735	878 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	DNTTIP2	Q5QJE6	756 aa	Known RBP	21.31	■■□□□ 1
RGMA-208	ENST00000556658	SCARA5	Q6ZMJ2	495 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	RTN4RL1	Q86UN2	441 aa	Predicted RBP	21.31	■■□□□ 1
RGMA-208	ENST00000556658	ZNF560	Q96MR9	790 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	BCO2	Q9BYV7	579 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	FAM124B	Q9H5Z6	455 aa	Predicted RBP	21.31	■■□□□ 1
RGMA-208	ENST00000556658	PRDM10	Q9NQV6	1147 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	TMEM39A	Q9NV64	488 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	SEPT11	Q9NVA2	429 aa	Known RBP	21.31	■■□□□ 1
RGMA-208	ENST00000556658	NAGPA	Q9UK23	515 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	SCN1A	P35498	2009 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	TANC1	Q9C0D5	1861 aa		21.31	■■□□□ 1
RGMA-208	ENST00000556658	KIF2A	O00139	706 aa	Predicted RBP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	PIR	O00625	290 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	KRT86	O43790	486 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	CD58	P19256	250 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	KIF5A	Q12840	1032 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	CCDC122	Q5T0U0	273 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	ALKBH5	Q6P6C2	394 aa	Known RBP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	ZNF662	Q6ZS27	426 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	GLYCTK	Q8IVS8	523 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	TTC39C	Q8N584	583 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	RBBP8NL	Q8NC74	664 aa	Predicted RBP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	GSTCD	Q8NEC7	633 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	DBF4B	Q8NFT6	615 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	SYT11	Q9BT88	431 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	PPP1R12C	Q9BZL4	782 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	TSGA10	Q9BZW7	698 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	DDX3X	O00571	662 aa	Known RBP eCLIP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	TUBB4A	P04350	444 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	FAM189B	P81408	668 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	GPNMB	Q14956	572 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	NAB2	Q15742	525 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	NYAP1	Q6ZVC0	841 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	NOP9	Q86U38	636 aa	Known RBP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	ZNF598	Q86UK7	904 aa	Known RBP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	ZNF677	Q86XU0	584 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	RPUSD2	Q8IZ73	545 aa	Known RBP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	UBR7	Q8N806	425 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	SLC30A5	Q8TAD4	765 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	MMS19	Q96T76	1030 aa		21.3	■■□□□ 1
RGMA-208	ENST00000556658	NOCT	Q9UK39	431 aa	Known RBP	21.3	■■□□□ 1
RGMA-208	ENST00000556658	CLTB	P09497	229 aa		21.29	■■□□□ 1
RGMA-208	ENST00000556658	LRPAP1	P30533	357 aa		21.29	■■□□□ 1
RGMA-208	ENST00000556658	CCL23	P55773	120 aa		21.29	■■□□□ 1
RGMA-208	ENST00000556658	CDR2	Q01850	454 aa		21.29	■■□□□ 1
RGMA-208	ENST00000556658	SLC20A1	Q8WUM9	679 aa		21.29	■■□□□ 1
RGMA-208	ENST00000556658	SCLY	Q96I15	445 aa		21.29	■■□□□ 1
RGMA-208	ENST00000556658	TDRD15	B5MCY1	1934 aa	Known RBP	21.29	■■□□□ 1
RGMA-208	ENST00000556658	CYP2C18	P33260	490 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	SCNN1G	P51170	649 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	SOX4	Q06945	474 aa	Predicted RBP	21.28	■■□□□ 1
RGMA-208	ENST00000556658	TAF3	Q5VWG9	929 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	LNX1	Q8TBB1	728 aa	Predicted RBP	21.28	■■□□□ 1
RGMA-208	ENST00000556658	MCOLN1	Q9GZU1	580 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	ACP6	Q9NPH0	428 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	TBX21	Q9UL17	535 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	SCN5A	Q14524	2016 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	TNNT1	P13805	278 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	GNA15	P30679	374 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	TAF6	P49848	677 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	LRRC26	Q2I0M4	334 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	SV2C	Q496J9	727 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	GLB1L	Q6UWU2	654 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	LINC01599	Q8WXQ3	324 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	WNT8A	Q9H1J5	351 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	SMYD3	Q9H7B4	428 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	GOLGA2P5	Q9HBQ8	144 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	MIOS	Q9NXC5	875 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658	SNX9	Q9Y5X1	595 aa		21.28	■■□□□ 1
RGMA-208	ENST00000556658		A0A0U1RQJ8	604 aa		21.27	■■□□□ 1
RGMA-208	ENST00000556658	ENPP3	O14638	875 aa		21.27	■■□□□ 1
RGMA-208	ENST00000556658	PPEF2	O14830	753 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms