RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ASPAP45381 313 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 ZNF132P52740 706 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 KLHL30Q0D2K2 578 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 GRIK3Q13003 919 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 IKBKEQ14164 716 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 GLB1LQ6UWU2 654 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 RAD9BQ6WBX8 426 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 ZNF677Q86XU0 584 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 TRIM43Q96BQ3 446 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-208ENST00000469529 CCDC42Q96M95 316 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 APOL6Q9BWW8 343 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
TRAF4-208ENST00000469529 KLK14Q9P0G3 267 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 PRKAG2Q9UGJ0 569 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 PCDHB7Q9Y5E2 793 aa13.67□□□□□ -0.22
TRAF4-208ENST00000469529 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-208ENST00000469529 CCP110O43303 1012 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 TACC1O75410 805 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 NDUFA10O95299 355 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 KRT19P08727 400 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 CYLC1P35663 651 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-208ENST00000469529 AARSP49588 968 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAF4-208ENST00000469529 CCL23P55773 120 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 KRT83P78385 493 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 SOX4Q06945 474 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-208ENST00000469529 BMS1Q14692 1282 aaKnown RBP13.66□□□□□ -0.22
TRAF4-208ENST00000469529 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 C10orf76Q5T2E6 689 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 TMEM199Q8N511 208 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 SLC30A5Q8TAD4 765 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 SPATA18Q8TC71 538 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 KAT5Q92993 513 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 LPPQ93052 612 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-208ENST00000469529 SCLYQ96I15 445 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 ZFP42Q96MM3 310 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 ZNF560Q96MR9 790 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 RNF19AQ9NV58 838 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 KIAA1257Q9ULG3 409 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 NENFQ9UMX5 172 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
TRAF4-208ENST00000469529 ATP8B3O60423 1300 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 SOWAHDA6NJG2 315 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 ESPNB1AK53 854 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 ZSCAN12O43309 604 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-208ENST00000469529 GZMAP12544 262 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 RAG1P15918 1043 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 ITGB8P26012 769 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 EIF4A3P38919 411 aaKnown RBP13.65□□□□□ -0.22
TRAF4-208ENST00000469529 MLH1P40692 756 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 LILRA4P59901 499 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 PTK2Q05397 1052 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 DSC1Q08554 894 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 INCA1Q0VD86 236 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 TUSC3Q13454 348 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 UPP1Q16831 310 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 NOMO2Q5JPE7 1267 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 GLRA4Q5JXX5 417 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 DCLRE1AQ6PJP8 1040 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 VPS36Q86VN1 386 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 NPAS4Q8IUM7 802 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-208ENST00000469529 PYCARDQ9ULZ3 195 aa13.65□□□□□ -0.22
TRAF4-208ENST00000469529 DNAH12Q6ZR08 3092 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 KPNA7A9QM74 516 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 TMEM189-UBE2V1I3L0A0 370 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 BAIAP3O94812 1187 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 PAEPP09466 180 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 CYP11B1P15538 503 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 TAF6P49848 677 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 SCNN1GP51170 649 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 AFF1P51825 1210 aaKnown RBP13.64□□□□□ -0.23
TRAF4-208ENST00000469529 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 SLC18A3Q16572 532 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 SV2CQ496J9 727 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 CLLU1OSQ5K130 101 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 ZNF571Q7Z3V5 609 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-208ENST00000469529 UNC93AQ86WB7 457 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 DDX1Q92499 740 aaKnown RBP13.64□□□□□ -0.23
TRAF4-208ENST00000469529 AGPAT1Q99943 283 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 PRDM5Q9NQX1 630 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-208ENST00000469529 CISHQ9NSE2 258 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 SPTLC3Q9NUV7 552 aa13.64□□□□□ -0.23
TRAF4-208ENST00000469529 NOCTQ9UK39 431 aaKnown RBP13.64□□□□□ -0.23
TRAF4-208ENST00000469529 BARX2Q9UMQ3 279 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-208ENST00000469529 CARNS1A5YM72 827 aa13.63□□□□□ -0.23
TRAF4-208ENST00000469529 GOLGA6L9A6NEM1 432 aa13.63□□□□□ -0.23
TRAF4-208ENST00000469529 CYP26A1O43174 497 aa13.63□□□□□ -0.23
TRAF4-208ENST00000469529 AKR1B10O60218 316 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms