RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NECAB2Q7Z6G3 386 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 RHOT1Q8IXI2 618 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 GSTO2Q9H4Y5 243 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 SYNPO2LQ9H987 977 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 TESQ9UGI8 421 aaKnown RBP6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 ATP8A1Q9Y2Q0 1164 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 PREX2Q70Z35 1606 aa6.5□□□□□ -1.37
HMGB3P5-201ENST00000428894 A2MP01023 1474 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 TCRBV7S2A1N4TA0A589 114 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 GPANK1O95872 356 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 ALAS1P13196 640 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 IARSP41252 1262 aaKnown RBP6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 HNRNPMP52272 730 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 HSD11B2P80365 405 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 ATP8B2P98198 1209 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 ACAP2Q15057 778 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 FOXR2Q6PJQ5 311 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 GPR149Q86SP6 731 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 CBARPQ8N350 705 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 FITM2Q8N6M3 262 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 JADE3Q92613 823 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 MKS1Q9NXB0 559 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 RGS17Q9UGC6 210 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 USP25Q9UHP3 1055 aa6.49□□□□□ -1.37
HMGB3P5-201ENST00000428894 SAMD9LQ8IVG5 1584 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 ZAR1LA6NP61 321 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 KIAA0355O15063 1070 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 KIAA0391O15091 583 aaKnown RBP6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 IGSF3O75054 1194 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 MT-CO1P00395 513 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 WASP42768 502 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 CXADRP78310 365 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 CREMQ03060 361 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 SCAPQ12770 1279 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 RNF187Q5TA31 235 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 DPY19L2P1Q6NXN4 242 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 FAM43AQ8N2R8 423 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 C1orf162Q8NEQ5 155 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 MARS2Q96GW9 593 aaKnown RBP6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 BOD1Q96IK1 185 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 GALNT9Q9HCQ5 603 aa6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 SAP30BPQ9UHR5 308 aaKnown RBP6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 MTO1Q9Y2Z2 717 aaKnown RBP6.48□□□□□ -1.37
HMGB3P5-201ENST00000428894 PLEKHH2Q8IVE3 1493 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 SBNO2Q9Y2G9 1366 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 NDUFS2O75306 463 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 ESRRBO95718 433 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 PLA2G5P39877 138 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 CTXN1P60606 82 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 MPP3Q13368 585 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 STRIP1Q5VSL9 837 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 SLC44A3Q8N4M1 653 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 FAXDC2Q96IV6 333 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 Q96MF0 132 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 TMEM74BQ9NUR3 256 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 CFDP1Q9UEE9 299 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 KCNE5Q9UJ90 142 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 TUBD1Q9UJT1 453 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 PCDHA13Q9Y5I0 950 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 KIAA1107Q9UPP5 1409 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 CDC42BPAQ5VT25 1732 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 MED14O60244 1454 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 CCDC18Q5T9S5 1454 aa6.47□□□□□ -1.37
HMGB3P5-201ENST00000428894 TNRQ92752 1358 aa6.46□□□□□ -1.37
HMGB3P5-201ENST00000428894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.46□□□□□ -1.37
HMGB3P5-201ENST00000428894 ATP7AQ04656 1500 aa6.46□□□□□ -1.37
HMGB3P5-201ENST00000428894 FAM135AQ9P2D6 1515 aa6.46□□□□□ -1.37
HMGB3P5-201ENST00000428894 CDHR4A6H8M9 788 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 NPHP4O75161 1426 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 ERN1O75460 977 aaKnown RBP6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 C5AR1P21730 350 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 FDXRP22570 491 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 MPLP40238 635 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 NOMO3P69849 1222 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 ATP2B3Q16720 1220 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 NOMO2Q5JPE7 1267 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 SYDE2Q5VT97 1194 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 RSPH3Q86UC2 560 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 VWDEQ8N2E2 1590 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 TBC1D15Q8TC07 691 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 NUP133Q8WUM0 1156 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 NACC2Q96BF6 587 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 C11orf54Q9H0W9 315 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 DEPDC5O75140 1603 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 WASHC2CQ9Y4E1 1318 aa6.46□□□□□ -1.38
HMGB3P5-201ENST00000428894 ADGBQ8N7X0 1667 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 PLXNC1O60486 1568 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 NEURL4Q96JN8 1562 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 KLHL33A6NCF5 533 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 MYBL2P10244 700 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 CXCR5P32302 372 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 CLK3P49761 638 aaKnown RBP6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 GUCY2FP51841 1108 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 SLC16A1P53985 500 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 TARDBPQ13148 414 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 CYP2A13Q16696 494 aa6.45□□□□□ -1.38
HMGB3P5-201ENST00000428894 ERCC6LQ2NKX8 1250 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms