RNA–Protein interactions for RNA: snR161

snR161, Transcript of H/ACA small nucleolar RNA (snoRNA), yeast

Gene snR161, Length 161 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR161	snR161	DFG5	Q05031	458 aa		0.23	□□□□□ -2.37
snR161	snR161	MCM16	Q12262	181 aa		0.23	□□□□□ -2.37
snR161	snR161	DFG16	Q99234	619 aa		0.23	□□□□□ -2.37
snR161	snR161	CYC7	P00045	113 aa		0.22	□□□□□ -2.37
snR161	snR161	PRP6	P19735	899 aa	Predicted RBP	0.22	□□□□□ -2.37
snR161	snR161	SAF1	P38352	637 aa		0.22	□□□□□ -2.37
snR161	snR161	YHL008C	P38750	627 aa		0.22	□□□□□ -2.37
snR161	snR161	SSN3	P39073	555 aa		0.22	□□□□□ -2.37
snR161	snR161	SPO74	P45819	413 aa		0.22	□□□□□ -2.37
snR161	snR161	MSN5	P52918	1224 aa		0.22	□□□□□ -2.37
snR161	snR161	PRP43	P53131	767 aa	Known RBP	0.22	□□□□□ -2.37
snR161	snR161	APP1	P53933	587 aa		0.22	□□□□□ -2.37
snR161	snR161	ITT1	Q04638	464 aa		0.22	□□□□□ -2.37
snR161	snR161	ALR1	Q08269	859 aa		0.22	□□□□□ -2.37
snR161	snR161	PSH1	Q12161	406 aa		0.22	□□□□□ -2.37
snR161	snR161	PNS1	Q12412	539 aa		0.22	□□□□□ -2.37
snR161	snR161	NHA1	Q99271	985 aa		0.22	□□□□□ -2.37
snR161	snR161	NAR1	P23503	491 aa	Known RBP	0.21	□□□□□ -2.38
snR161	snR161	COQ2	P32378	372 aa		0.21	□□□□□ -2.38
snR161	snR161	MKS1	P34072	584 aa		0.21	□□□□□ -2.38
snR161	snR161	PGM2	P37012	569 aa	Known RBP	0.21	□□□□□ -2.38
snR161	snR161	POL12	P38121	705 aa	Predicted RBP	0.21	□□□□□ -2.38
snR161	snR161	KIC1	P38692	1080 aa		0.21	□□□□□ -2.38
snR161	snR161	SPR3	P41901	512 aa		0.21	□□□□□ -2.38
snR161	snR161	BDF2	Q07442	638 aa		0.21	□□□□□ -2.38
snR161	snR161	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	0.21	□□□□□ -2.38	not detected
snR161	snR161	FRA1	Q07825	749 aa		0.21	□□□□□ -2.38
snR161	snR161	BDS1	Q08347	646 aa		0.21	□□□□□ -2.38
snR161	snR161	YDL206W	Q12424	762 aa		0.21	□□□□□ -2.38
snR161	snR161	CHS2	P14180	963 aa		0.2	□□□□□ -2.38
snR161	snR161	RAD53	P22216	821 aa		0.2	□□□□□ -2.38
snR161	snR161	FBP26	P32604	452 aa		0.2	□□□□□ -2.38
snR161	snR161	RGT1	P32862	1170 aa		0.2	□□□□□ -2.38
snR161	snR161	SHM1	P37292	490 aa	Predicted RBP	0.2	□□□□□ -2.38
snR161	snR161	MRPL16	P38064	232 aa		0.2	□□□□□ -2.38
snR161	snR161	RRM3	P38766	723 aa		0.2	□□□□□ -2.38
snR161	snR161	SDH1	Q00711	640 aa		0.2	□□□□□ -2.38
snR161	snR161	GIS4	Q04233	774 aa		0.2	□□□□□ -2.38
snR161	snR161	TUB2	P02557	457 aa	Known RBP	0.19	□□□□□ -2.38
snR161	snR161	RPS31	P05759	152 aa	Known RBP	0.19	□□□□□ -2.38
snR161	snR161	GCD1	P09032	578 aa	Predicted RBP	0.19	□□□□□ -2.38
snR161	snR161	MSB1	P21339	1137 aa	Known RBP	0.19	□□□□□ -2.38
snR161	snR161	YUR1	P26725	428 aa		0.19	□□□□□ -2.38
snR161	snR161	CTS1	P29029	562 aa		0.19	□□□□□ -2.38
snR161	snR161	NAM7	P30771	971 aa	Known RBP	0.19	□□□□□ -2.38
snR161	snR161	ALG14	P38242	237 aa		0.19	□□□□□ -2.38
snR161	snR161	CHS7	P38843	316 aa		0.19	□□□□□ -2.38
snR161	snR161	IFH1	P39520	1085 aa		0.19	□□□□□ -2.38
snR161	snR161	PRK1	P40494	810 aa		0.19	□□□□□ -2.38
snR161	snR161	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	0.19	□□□□□ -2.38	not detected
snR161	snR161	PUS6	P53294	404 aa		0.19	□□□□□ -2.38
snR161	snR161	BFR2	Q06631	534 aa	Known RBP	0.19	□□□□□ -2.38
snR161	snR161	PUS9	Q12069	462 aa		0.19	□□□□□ -2.38
snR161	snR161	TY1A-NL1	Q12391	440 aa	Known RBP	0.19	□□□□□ -2.38
snR161	snR161	COX6	P00427	148 aa		0.18	□□□□□ -2.38
snR161	snR161	LEU1	P07264	779 aa	Known RBP	0.18	□□□□□ -2.38
snR161	snR161	RSC6	P25632	483 aa		0.18	□□□□□ -2.38
snR161	snR161	PDC6	P26263	563 aa	Known RBP	0.18	□□□□□ -2.38
snR161	snR161	CLB5	P30283	435 aa		0.18	□□□□□ -2.38
snR161	snR161	SHM2	P37291	469 aa	Known RBP	0.18	□□□□□ -2.38
snR161	snR161	MET30	P39014	640 aa		0.18	□□□□□ -2.38
snR161	snR161	ATF1	P40353	525 aa		0.18	□□□□□ -2.38
snR161	snR161	IOC3	P43596	787 aa		0.18	□□□□□ -2.38
snR161	snR161	ALD2	P47771	506 aa		0.18	□□□□□ -2.38
snR161	snR161	ORC3	P54790	616 aa		0.18	□□□□□ -2.38
snR161	snR161	CLU1	Q03690	1277 aa	Known RBP	0.18	□□□□□ -2.38
snR161	snR161	YPR084W	Q06821	456 aa		0.18	□□□□□ -2.38
snR161	snR161	REC8	Q12188	680 aa		0.18	□□□□□ -2.38
snR161	snR161	ICT1	Q12385	394 aa		0.18	□□□□□ -2.38
snR161	snR161	STB3	Q12427	513 aa		0.18	□□□□□ -2.38
snR161	snR161	PSE1	P32337	1089 aa	Known RBP	0.17	□□□□□ -2.38
snR161	snR161	IRE1	P32361	1115 aa		0.17	□□□□□ -2.38
snR161	snR161	AIM3	P38266	947 aa	Known RBP	0.17	□□□□□ -2.38
snR161	snR161	AKR1	P39010	764 aa		0.17	□□□□□ -2.38
snR161	snR161	REF2	P42073	533 aa	Predicted RBP	0.17	□□□□□ -2.38
snR161	snR161	FIG4	P42837	879 aa		0.17	□□□□□ -2.38
snR161	snR161	JJJ2	P46997	583 aa		0.17	□□□□□ -2.38
snR161	snR161	RIM8	P53179	542 aa		0.17	□□□□□ -2.38
snR161	snR161	NIS1	P53939	407 aa		0.17	□□□□□ -2.38
snR161	snR161	CTF4	Q01454	927 aa		0.17	□□□□□ -2.38
snR161	snR161	ISU1	Q03020	165 aa		0.17	□□□□□ -2.38
snR161	snR161	TY4B-P	A0A0B7P3V8	1104 aa		0.16	□□□□□ -2.38
snR161	snR161	MRP10	O75012	95 aa		0.16	□□□□□ -2.38
snR161	snR161	SOD2	P00447	233 aa		0.16	□□□□□ -2.38
snR161	snR161	ERS1	P17261	260 aa		0.16	□□□□□ -2.38
snR161	snR161	PRE10	P21242	288 aa	Known RBP RIP-Chip data	0.16	□□□□□ -2.38	not detected
snR161	snR161	SLY41	P22215	453 aa		0.16	□□□□□ -2.38
snR161	snR161	TMT1	P32643	299 aa		0.16	□□□□□ -2.38
snR161	snR161	HSP78	P33416	811 aa		0.16	□□□□□ -2.38
snR161	snR161	AHP1	P38013	176 aa	Known RBP	0.16	□□□□□ -2.38
snR161	snR161	DED81	P38707	554 aa	Known RBP	0.16	□□□□□ -2.38
snR161	snR161	MNN10	P50108	393 aa	Known RBP	0.16	□□□□□ -2.38
snR161	snR161	YAP7	Q08182	245 aa		0.16	□□□□□ -2.38
snR161	snR161	MAK21	Q12176	1025 aa	Known RBP	0.16	□□□□□ -2.38
snR161	snR161	WTM2	Q12206	467 aa		0.16	□□□□□ -2.38
snR161	snR161	TY4A-H	Q6Q5P6	413 aa		0.16	□□□□□ -2.38
snR161	snR161	SPT2	P06843	333 aa	Predicted RBP	0.15	□□□□□ -2.39
snR161	snR161	RGP1	P16664	663 aa		0.15	□□□□□ -2.39
snR161	snR161	RDS2	P19541	446 aa	Known RBP	0.15	□□□□□ -2.39
snR161	snR161	NAB2	P32505	525 aa	Known RBP RIP-Chip data	0.15	□□□□□ -2.39	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 8 ms