RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W DIP2Q12220 943 aaPredicted RBP13.11□□□□□ -0.31
MSF1YPR047W FAS2P19097 1887 aaKnown RBP13.1□□□□□ -0.31
MSF1YPR047W YBR287WP38355 427 aa13.09□□□□□ -0.31
MSF1YPR047W THI22Q06490 572 aa13.07□□□□□ -0.32
MSF1YPR047W MSM1P22438 575 aa13.06□□□□□ -0.32
MSF1YPR047W DPL1Q05567 589 aa13.05□□□□□ -0.32
MSF1YPR047W YLR271WQ06152 274 aa13.05□□□□□ -0.32
MSF1YPR047W YOL057WQ08225 711 aa13.05□□□□□ -0.32
MSF1YPR047W GYP7P48365 746 aa13.05□□□□□ -0.32
MSF1YPR047W PKH1Q03407 766 aa13.05□□□□□ -0.32
MSF1YPR047W TOM1Q03280 3268 aa13.05□□□□□ -0.32
MSF1YPR047W VHR2P40041 505 aa13.04□□□□□ -0.32
MSF1YPR047W RTT109Q07794 436 aa13.04□□□□□ -0.32
MSF1YPR047W MPP10P47083 593 aaKnown RBP13.03□□□□□ -0.32
MSF1YPR047W FIG2P25653 1609 aa13.02□□□□□ -0.32
MSF1YPR047W HKR1P41809 1802 aa13.02□□□□□ -0.33
MSF1YPR047W FET4P40988 552 aa13.02□□□□□ -0.33
MSF1YPR047W DNM1P54861 757 aa13.02□□□□□ -0.33
MSF1YPR047W GAP1P19145 602 aaPredicted RBP13.01□□□□□ -0.33
MSF1YPR047W GLC3P32775 704 aa13.01□□□□□ -0.33
MSF1YPR047W TIM50Q02776 476 aa13□□□□□ -0.33
MSF1YPR047W FCP1Q03254 732 aa12.99□□□□□ -0.33
MSF1YPR047W AIM7Q12156 149 aa12.99□□□□□ -0.33
MSF1YPR047W SWI1P09547 1314 aa12.98□□□□□ -0.33
MSF1YPR047W TIF4632P39936 914 aaKnown RBP12.97□□□□□ -0.33
MSF1YPR047W CST6P40535 587 aa12.97□□□□□ -0.33
MSF1YPR047W ETP1P38748 585 aaKnown RBP12.96□□□□□ -0.33
MSF1YPR047W SET4P42948 560 aa12.96□□□□□ -0.33
MSF1YPR047W DUS1P53759 423 aaKnown RBP12.96□□□□□ -0.33
MSF1YPR047W NSR1P27476 414 aaKnown RBP RIP-Chip data12.96□□□□□ -0.34not detected
MSF1YPR047W HEF3P53978 1044 aaKnown RBP12.96□□□□□ -0.34
MSF1YPR047W TRM44Q02648 567 aaKnown RBP12.96□□□□□ -0.34
MSF1YPR047W YDR306CQ06640 478 aa12.96□□□□□ -0.34
MSF1YPR047W DPH6Q12429 685 aa12.96□□□□□ -0.34
MSF1YPR047W TPD3P31383 635 aa12.95□□□□□ -0.34
MSF1YPR047W YIL089WP40500 205 aa12.95□□□□□ -0.34
MSF1YPR047W YJR008WP47085 338 aa12.95□□□□□ -0.34
MSF1YPR047W SRT1Q03175 343 aa12.95□□□□□ -0.34
MSF1YPR047W YDL144CQ07589 356 aa12.95□□□□□ -0.34
MSF1YPR047W KRE2P27809 442 aa12.94□□□□□ -0.34
MSF1YPR047W TRP5P00931 707 aaKnown RBP12.93□□□□□ -0.34
MSF1YPR047W NUP133P36161 1157 aa12.93□□□□□ -0.34
MSF1YPR047W EMP47P43555 445 aa12.93□□□□□ -0.34
MSF1YPR047W YGR117CP53270 476 aa12.93□□□□□ -0.34
MSF1YPR047W ICP55P40051 511 aa12.92□□□□□ -0.34
MSF1YPR047W PEA2P40091 420 aa12.92□□□□□ -0.34
MSF1YPR047W VPS4P52917 437 aa12.92□□□□□ -0.34
MSF1YPR047W UBX2Q04228 584 aa12.92□□□□□ -0.34
MSF1YPR047W MRP7P12687 371 aa12.91□□□□□ -0.34
MSF1YPR047W GAS5Q08193 484 aa12.91□□□□□ -0.34
MSF1YPR047W RRG1Q12167 365 aaPredicted RBP12.91□□□□□ -0.34
MSF1YPR047W POM152P39685 1337 aa12.91□□□□□ -0.34
MSF1YPR047W AFG2P32794 780 aa12.9□□□□□ -0.34
MSF1YPR047W CRF1Q04930 467 aa12.9□□□□□ -0.34
MSF1YPR047W HPR1P17629 752 aaKnown RBP12.89□□□□□ -0.35
MSF1YPR047W SET1P38827 1080 aaKnown RBP12.89□□□□□ -0.35
MSF1YPR047W ITC1P53125 1264 aa12.89□□□□□ -0.35
MSF1YPR047W STV1P37296 890 aa12.88□□□□□ -0.35
MSF1YPR047W RPT4P53549 437 aaKnown RBP12.88□□□□□ -0.35
MSF1YPR047W SAC3P46674 1301 aa12.88□□□□□ -0.35
MSF1YPR047W CWC15Q03772 175 aaKnown RBP12.88□□□□□ -0.35
MSF1YPR047W SPL2P38839 148 aa12.87□□□□□ -0.35
MSF1YPR047W PSH1Q12161 406 aa12.87□□□□□ -0.35
MSF1YPR047W MGM1P32266 881 aa12.86□□□□□ -0.35
MSF1YPR047W TYW1Q08960 810 aaKnown RBP12.86□□□□□ -0.35
MSF1YPR047W NGR1P32831 672 aaKnown RBP12.85□□□□□ -0.35
MSF1YPR047W THI3Q07471 609 aa12.85□□□□□ -0.35
MSF1YPR047W GSM1P42950 618 aa12.84□□□□□ -0.35
MSF1YPR047W SEN54Q02825 467 aaPredicted RBP12.83□□□□□ -0.36
MSF1YPR047W YGR122WP53272 402 aa12.82□□□□□ -0.36
MSF1YPR047W PRP42Q03776 544 aaKnown RBP12.81□□□□□ -0.36
MSF1YPR047W MTC5Q03897 1148 aa12.81□□□□□ -0.36
MSF1YPR047W FLO11P08640 1367 aa12.81□□□□□ -0.36
MSF1YPR047W TIF6Q12522 245 aaKnown RBP12.79□□□□□ -0.36
MSF1YPR047W SUP35P05453 685 aaKnown RBP12.79□□□□□ -0.36
MSF1YPR047W IRC4Q03036 179 aa12.79□□□□□ -0.36
MSF1YPR047W SRC1Q03707 834 aa12.79□□□□□ -0.36
MSF1YPR047W NOP8Q08287 484 aaPredicted RBP12.79□□□□□ -0.36
MSF1YPR047W SWC3P31376 625 aa12.78□□□□□ -0.36
MSF1YPR047W UBP12P39538 1254 aa12.78□□□□□ -0.36
MSF1YPR047W CBP1P07252 654 aa12.77□□□□□ -0.37
MSF1YPR047W RAD24P32641 659 aa12.77□□□□□ -0.37
MSF1YPR047W BSD2P38356 321 aa12.77□□□□□ -0.37
MSF1YPR047W TOS4Q06266 489 aa12.77□□□□□ -0.37
MSF1YPR047W SRF1Q12516 437 aa12.77□□□□□ -0.37
MSF1YPR047W HVG1P0CE11 249 aa12.76□□□□□ -0.37
MSF1YPR047W SUI2P20459 304 aaKnown RBP12.76□□□□□ -0.37
MSF1YPR047W LCB1P25045 558 aaKnown RBP12.76□□□□□ -0.37
MSF1YPR047W RPP0P05317 312 aaKnown RBP12.75□□□□□ -0.37
MSF1YPR047W PNT1P38969 423 aa12.75□□□□□ -0.37
MSF1YPR047W RRT6P53117 311 aaPredicted RBP12.75□□□□□ -0.37
MSF1YPR047W SNU66Q12420 587 aaPredicted RBP12.75□□□□□ -0.37
MSF1YPR047W CSR2Q12734 1121 aa12.75□□□□□ -0.37
MSF1YPR047W ARG82P07250 355 aa12.74□□□□□ -0.37
MSF1YPR047W RPS7AP26786 190 aaKnown RBP12.74□□□□□ -0.37
MSF1YPR047W HXT10P43581 546 aa12.74□□□□□ -0.37
MSF1YPR047W NUG1P40010 520 aaKnown RBP12.73□□□□□ -0.37
MSF1YPR047W YPP1P46951 817 aa12.72□□□□□ -0.37
MSF1YPR047W JJJ2P46997 583 aa12.72□□□□□ -0.37
MSF1YPR047W ACK1Q07622 623 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms