RNA–Protein interactions for RNA: YPR018W

RLF2, Transcript of Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1), yeast

Gene RLF2, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLF2	YPR018W	FPS1	P23900	669 aa		4.18	□□□□□ -1.74
RLF2	YPR018W	GLN1	P32288	370 aa	Known RBP	4.18	□□□□□ -1.74
RLF2	YPR018W	BIM1	P40013	344 aa		4.18	□□□□□ -1.74
RLF2	YPR018W	ATG32	P40458	529 aa		4.18	□□□□□ -1.74
RLF2	YPR018W	YJL007C	P47080	104 aa		4.18	□□□□□ -1.74
RLF2	YPR018W	CSN12	P47130	423 aa		4.18	□□□□□ -1.74
RLF2	YPR018W	SUB2	Q07478	446 aa	Known RBP	4.18	□□□□□ -1.74
RLF2	YPR018W	TY1A-DR3	Q12441	440 aa		4.18	□□□□□ -1.74
RLF2	YPR018W	KTR1	P27810	393 aa	Known RBP	4.17	□□□□□ -1.74
RLF2	YPR018W	YJU3	P28321	313 aa		4.17	□□□□□ -1.74
RLF2	YPR018W	SSA1	P10591	642 aa	Known RBP	4.16	□□□□□ -1.74
RLF2	YPR018W	SSA2	P10592	639 aa	Known RBP	4.16	□□□□□ -1.74
RLF2	YPR018W	MSN5	P52918	1224 aa		4.16	□□□□□ -1.74
RLF2	YPR018W	RSC30	P38781	883 aa		4.16	□□□□□ -1.74
RLF2	YPR018W	ISU1	Q03020	165 aa		4.16	□□□□□ -1.74
RLF2	YPR018W	PDC5	P16467	563 aa	Known RBP	4.15	□□□□□ -1.75
RLF2	YPR018W	KNS1	P32350	737 aa	Predicted RBP	4.15	□□□□□ -1.75
RLF2	YPR018W	GEF1	P37020	779 aa		4.15	□□□□□ -1.75
RLF2	YPR018W	SSN3	P39073	555 aa		4.14	□□□□□ -1.75
RLF2	YPR018W	SLX8	P40072	274 aa		4.14	□□□□□ -1.75
RLF2	YPR018W	NOP8	Q08287	484 aa	Predicted RBP	4.14	□□□□□ -1.75
RLF2	YPR018W	RPP2B	P02400	110 aa	Known RBP	4.13	□□□□□ -1.75
RLF2	YPR018W	TIF1	P10081	395 aa	Known RBP	4.12	□□□□□ -1.75
RLF2	YPR018W	AHP1	P38013	176 aa	Known RBP	4.12	□□□□□ -1.75
RLF2	YPR018W	AOS1	Q06624	347 aa		4.11	□□□□□ -1.75
RLF2	YPR018W	BIO2	P32451	375 aa		4.11	□□□□□ -1.75
RLF2	YPR018W	TEC1	P18412	486 aa		4.1	□□□□□ -1.75
RLF2	YPR018W	CPS1	P27614	576 aa		4.1	□□□□□ -1.75
RLF2	YPR018W	ATG20	Q07528	640 aa		4.1	□□□□□ -1.75
RLF2	YPR018W	SSA4	P22202	642 aa	Known RBP	4.09	□□□□□ -1.75
RLF2	YPR018W	YPR084W	Q06821	456 aa		4.09	□□□□□ -1.75
RLF2	YPR018W	YBL036C	P38197	257 aa		4.09	□□□□□ -1.76
RLF2	YPR018W	RPL34B	P40525	121 aa	Known RBP	4.09	□□□□□ -1.76
RLF2	YPR018W	YNL108C	P53929	270 aa		4.07	□□□□□ -1.76
RLF2	YPR018W	RTG2	P32608	588 aa	Known RBP	4.07	□□□□□ -1.76
RLF2	YPR018W	TTI1	P36097	1038 aa		4.07	□□□□□ -1.76
RLF2	YPR018W	TPS3	P38426	1054 aa	Known RBP	4.07	□□□□□ -1.76
RLF2	YPR018W	NOB1	Q08444	459 aa	Known RBP	4.07	□□□□□ -1.76
RLF2	YPR018W	PKH3	Q03306	898 aa	Predicted RBP	4.06	□□□□□ -1.76
RLF2	YPR018W	RAD59	Q12223	238 aa		4.06	□□□□□ -1.76
RLF2	YPR018W	MRPL16	P38064	232 aa		4.05	□□□□□ -1.76
RLF2	YPR018W	TY1A-DR2	Q03964	440 aa	Known RBP	4.05	□□□□□ -1.76
RLF2	YPR018W	WTM2	Q12206	467 aa		4.05	□□□□□ -1.76
RLF2	YPR018W	ELM1	P32801	640 aa		4.05	□□□□□ -1.76
RLF2	YPR018W	BUD9	P53226	547 aa		4.05	□□□□□ -1.76
RLF2	YPR018W	YML083C	Q04526	418 aa		4.05	□□□□□ -1.76
RLF2	YPR018W	ARG8	P18544	423 aa		4.04	□□□□□ -1.76
RLF2	YPR018W	GIS1	Q03833	894 aa		4.04	□□□□□ -1.76
RLF2	YPR018W	FRA1	Q07825	749 aa		4.03	□□□□□ -1.76
RLF2	YPR018W	SUP45	P12385	437 aa	Known RBP	4.02	□□□□□ -1.77
RLF2	YPR018W	YDJ1	P25491	409 aa	Known RBP	4.02	□□□□□ -1.77
RLF2	YPR018W	MRX12	P47084	519 aa		4.02	□□□□□ -1.77
RLF2	YPR018W	RPL34A	P87262	121 aa	Predicted RBP	4.02	□□□□□ -1.77
RLF2	YPR018W	ENO1	P00924	437 aa	Known RBP	4.02	□□□□□ -1.77
RLF2	YPR018W	PUP1	P25043	261 aa		4.02	□□□□□ -1.77
RLF2	YPR018W	PGM1	P33401	570 aa	Known RBP	4.02	□□□□□ -1.77
RLF2	YPR018W	YKR073C	P36153	106 aa		4.02	□□□□□ -1.77
RLF2	YPR018W	STB3	Q12427	513 aa		4.02	□□□□□ -1.77
RLF2	YPR018W	ENO2	P00925	437 aa	Known RBP	4.01	□□□□□ -1.77
RLF2	YPR018W	LIP5	P32875	414 aa		4.01	□□□□□ -1.77
RLF2	YPR018W	MED7	Q08278	222 aa		4.01	□□□□□ -1.77
RLF2	YPR018W	IRE1	P32361	1115 aa		4	□□□□□ -1.77
RLF2	YPR018W	CDC3	P32457	520 aa	Known RBP	4	□□□□□ -1.77
RLF2	YPR018W	CSE4	P36012	229 aa		4	□□□□□ -1.77
RLF2	YPR018W	JJJ2	P46997	583 aa		4	□□□□□ -1.77
RLF2	YPR018W	ORC1	P54784	914 aa	Predicted RBP	4	□□□□□ -1.77
RLF2	YPR018W	GUT2	P32191	649 aa		4	□□□□□ -1.77
RLF2	YPR018W	ALA1	P40825	983 aa	Known RBP	4	□□□□□ -1.77
RLF2	YPR018W	TRP3	P00937	484 aa		3.99	□□□□□ -1.77
RLF2	YPR018W	DAT1	P13483	248 aa	Known RBP	3.99	□□□□□ -1.77
RLF2	YPR018W	UTP7	P40055	554 aa	Known RBP	3.99	□□□□□ -1.77
RLF2	YPR018W	SPR3	P41901	512 aa		3.99	□□□□□ -1.77
RLF2	YPR018W	MRX10	Q05648	414 aa		3.99	□□□□□ -1.77
RLF2	YPR018W	NHA1	Q99271	985 aa		3.99	□□□□□ -1.77
RLF2	YPR018W	SSF1	P38789	453 aa	Predicted RBP	3.98	□□□□□ -1.77
RLF2	YPR018W	UBP5	P39944	805 aa		3.98	□□□□□ -1.77
RLF2	YPR018W	RIM21	P48565	533 aa		3.98	□□□□□ -1.77
RLF2	YPR018W	SHM1	P37292	490 aa	Predicted RBP	3.98	□□□□□ -1.77
RLF2	YPR018W	HAT1	Q12341	374 aa		3.98	□□□□□ -1.77
RLF2	YPR018W	AI3	P03877	415 aa		3.97	□□□□□ -1.77
RLF2	YPR018W	MAK16	P10962	306 aa	Predicted RBP	3.97	□□□□□ -1.77
RLF2	YPR018W	SLD2	P34252	453 aa		3.97	□□□□□ -1.77
RLF2	YPR018W	TGL4	P36165	910 aa		3.97	□□□□□ -1.77
RLF2	YPR018W	SEN54	Q02825	467 aa	Predicted RBP	3.97	□□□□□ -1.77
RLF2	YPR018W	PSH1	Q12161	406 aa		3.97	□□□□□ -1.77
RLF2	YPR018W	PDC6	P26263	563 aa	Known RBP	3.96	□□□□□ -1.78
RLF2	YPR018W	UTR2	P32623	467 aa		3.95	□□□□□ -1.78
RLF2	YPR018W	PGM2	P37012	569 aa	Known RBP	3.95	□□□□□ -1.78
RLF2	YPR018W	CTH1	P47976	325 aa		3.95	□□□□□ -1.78
RLF2	YPR018W	SPT2	P06843	333 aa	Predicted RBP	3.95	□□□□□ -1.78
RLF2	YPR018W	RDS2	P19541	446 aa	Known RBP	3.95	□□□□□ -1.78
RLF2	YPR018W	SPT5	P27692	1063 aa	Known RBP	3.95	□□□□□ -1.78
RLF2	YPR018W	ALG14	P38242	237 aa		3.95	□□□□□ -1.78
RLF2	YPR018W	TOS1	P38288	455 aa		3.95	□□□□□ -1.78
RLF2	YPR018W	MSC7	P38694	644 aa		3.95	□□□□□ -1.78
RLF2	YPR018W	SUM1	P46676	1062 aa		3.95	□□□□□ -1.78
RLF2	YPR018W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
RLF2	YPR018W	RRN6	P32786	894 aa		3.94	□□□□□ -1.78
RLF2	YPR018W	KAE1	P36132	386 aa		3.94	□□□□□ -1.78
RLF2	YPR018W	SAC7	P17121	654 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms