RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	ICL1	P28240	557 aa	Predicted RBP	13.34	□□□□□ -0.27
PEX25	YPL112C	UBP16	Q02863	499 aa		13.34	□□□□□ -0.27
PEX25	YPL112C	SUI2	P20459	304 aa	Known RBP	13.33	□□□□□ -0.28
PEX25	YPL112C	RPN1	P38764	993 aa	Known RBP	13.33	□□□□□ -0.28
PEX25	YPL112C	CST6	P40535	587 aa		13.33	□□□□□ -0.28
PEX25	YPL112C	RPP0	P05317	312 aa	Known RBP	13.32	□□□□□ -0.28
PEX25	YPL112C	RPL17A	P05740	184 aa	Known RBP	13.32	□□□□□ -0.28
PEX25	YPL112C	NUP133	P36161	1157 aa		13.32	□□□□□ -0.28
PEX25	YPL112C	RPL17B	P46990	184 aa	Known RBP	13.32	□□□□□ -0.28
PEX25	YPL112C	FPK1	P53739	893 aa		13.32	□□□□□ -0.28
PEX25	YPL112C	SAS4	Q04003	481 aa		13.32	□□□□□ -0.28
PEX25	YPL112C	YDR306C	Q06640	478 aa		13.32	□□□□□ -0.28
PEX25	YPL112C	MRP7	P12687	371 aa		13.31	□□□□□ -0.28
PEX25	YPL112C	FRD1	P32614	470 aa	Known RBP	13.31	□□□□□ -0.28
PEX25	YPL112C	FCP1	Q03254	732 aa		13.31	□□□□□ -0.28
PEX25	YPL112C	GRX6	Q12438	231 aa		13.31	□□□□□ -0.28
PEX25	YPL112C	SYF1	Q04048	859 aa	Predicted RBP	13.3	□□□□□ -0.28
PEX25	YPL112C	HKR1	P41809	1802 aa		13.29	□□□□□ -0.28
PEX25	YPL112C	YKU70	P32807	602 aa		13.29	□□□□□ -0.28
PEX25	YPL112C	SLI15	P38283	698 aa		13.28	□□□□□ -0.28
PEX25	YPL112C	VPS27	P40343	622 aa	Known RBP	13.28	□□□□□ -0.28
PEX25	YPL112C	SHC1	P39000	512 aa		13.27	□□□□□ -0.29
PEX25	YPL112C	RPS9B	P05755	195 aa	Known RBP	13.26	□□□□□ -0.29
PEX25	YPL112C	FAS2	P19097	1887 aa	Known RBP	13.26	□□□□□ -0.29
PEX25	YPL112C	YJR008W	P47085	338 aa		13.26	□□□□□ -0.29
PEX25	YPL112C	ATG20	Q07528	640 aa		13.26	□□□□□ -0.29
PEX25	YPL112C	YGR122W	P53272	402 aa		13.25	□□□□□ -0.29
PEX25	YPL112C	SSA4	P22202	642 aa	Known RBP	13.23	□□□□□ -0.29
PEX25	YPL112C	CDC45	Q08032	650 aa		13.23	□□□□□ -0.29
PEX25	YPL112C	TSR3	Q12094	313 aa	Known RBP	13.23	□□□□□ -0.29
PEX25	YPL112C	FIG2	P25653	1609 aa		13.22	□□□□□ -0.29
PEX25	YPL112C	THS1	P04801	734 aa	Known RBP	13.21	□□□□□ -0.29
PEX25	YPL112C	RET1	P22276	1149 aa	Known RBP	13.21	□□□□□ -0.29
PEX25	YPL112C	RAD24	P32641	659 aa		13.21	□□□□□ -0.29
PEX25	YPL112C	SET1	P38827	1080 aa	Known RBP	13.21	□□□□□ -0.29
PEX25	YPL112C	ITC1	P53125	1264 aa		13.21	□□□□□ -0.29
PEX25	YPL112C	PUS5	Q06244	254 aa		13.21	□□□□□ -0.29
PEX25	YPL112C	NOP8	Q08287	484 aa	Predicted RBP	13.21	□□□□□ -0.29
PEX25	YPL112C	PEX21	P50091	288 aa		13.2	□□□□□ -0.3
PEX25	YPL112C	PSH1	Q12161	406 aa		13.2	□□□□□ -0.3
PEX25	YPL112C	DPH6	Q12429	685 aa		13.2	□□□□□ -0.3
PEX25	YPL112C	SAC3	P46674	1301 aa		13.19	□□□□□ -0.3
PEX25	YPL112C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	13.19	□□□□□ -0.3	not detected
PEX25	YPL112C	SWC3	P31376	625 aa		13.19	□□□□□ -0.3
PEX25	YPL112C	MAK21	Q12176	1025 aa	Known RBP	13.19	□□□□□ -0.3
PEX25	YPL112C	YPP1	P46951	817 aa		13.18	□□□□□ -0.3
PEX25	YPL112C	RVB2	Q12464	471 aa	Known RBP	13.18	□□□□□ -0.3
PEX25	YPL112C	SET4	P42948	560 aa		13.17	□□□□□ -0.3
PEX25	YPL112C	DPL1	Q05567	589 aa		13.17	□□□□□ -0.3
PEX25	YPL112C	RTG2	P32608	588 aa	Known RBP	13.16	□□□□□ -0.3
PEX25	YPL112C	YLR278C	Q05854	1341 aa		13.15	□□□□□ -0.3
PEX25	YPL112C	MSM1	P22438	575 aa		13.15	□□□□□ -0.3
PEX25	YPL112C	ICP55	P40051	511 aa		13.15	□□□□□ -0.3
PEX25	YPL112C	TRP5	P00931	707 aa	Known RBP	13.14	□□□□□ -0.31
PEX25	YPL112C	KRE2	P27809	442 aa		13.14	□□□□□ -0.31
PEX25	YPL112C	TIF4632	P39936	914 aa	Known RBP	13.14	□□□□□ -0.31
PEX25	YPL112C	BOI2	P39969	1040 aa		13.14	□□□□□ -0.31
PEX25	YPL112C	RRD1	P40454	393 aa	Known RBP	13.14	□□□□□ -0.31
PEX25	YPL112C	RPT4	P53549	437 aa	Known RBP	13.14	□□□□□ -0.31
PEX25	YPL112C	CSI1	Q04368	295 aa		13.14	□□□□□ -0.31
PEX25	YPL112C	NGR1	P32831	672 aa	Known RBP	13.13	□□□□□ -0.31
PEX25	YPL112C	UBP12	P39538	1254 aa		13.13	□□□□□ -0.31
PEX25	YPL112C	MTC5	Q03897	1148 aa		13.13	□□□□□ -0.31
PEX25	YPL112C	THI3	Q07471	609 aa		13.13	□□□□□ -0.31
PEX25	YPL112C	DUR1,2	P32528	1835 aa	Known RBP	13.12	□□□□□ -0.31
PEX25	YPL112C	FET4	P40988	552 aa		13.12	□□□□□ -0.31
PEX25	YPL112C	UBX2	Q04228	584 aa		13.12	□□□□□ -0.31
PEX25	YPL112C	GAP1	P19145	602 aa	Predicted RBP	13.11	□□□□□ -0.31
PEX25	YPL112C	MGM1	P32266	881 aa		13.11	□□□□□ -0.31
PEX25	YPL112C	SPL2	P38839	148 aa		13.11	□□□□□ -0.31
PEX25	YPL112C	DAL5	P15365	543 aa		13.1	□□□□□ -0.31
PEX25	YPL112C	HXT10	P43581	546 aa		13.1	□□□□□ -0.31
PEX25	YPL112C	TIM50	Q02776	476 aa		13.1	□□□□□ -0.31
PEX25	YPL112C	GAS5	Q08193	484 aa		13.1	□□□□□ -0.31
PEX25	YPL112C	SUP35	P05453	685 aa	Known RBP	13.09	□□□□□ -0.31
PEX25	YPL112C	RPS19A	P07280	144 aa	Known RBP	13.09	□□□□□ -0.31
PEX25	YPL112C	RPS19B	P07281	144 aa	Predicted RBP	13.09	□□□□□ -0.31
PEX25	YPL112C	YRB30	P53107	440 aa	Predicted RBP	13.09	□□□□□ -0.31
PEX25	YPL112C	TRM44	Q02648	567 aa	Known RBP	13.09	□□□□□ -0.31
PEX25	YPL112C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	13.09	□□□□□ -0.31	not detected
PEX25	YPL112C	AIM7	Q12156	149 aa		13.09	□□□□□ -0.31
PEX25	YPL112C	GLC3	P32775	704 aa		13.08	□□□□□ -0.32
PEX25	YPL112C	YIL092W	P40497	633 aa		13.08	□□□□□ -0.32
PEX25	YPL112C	RRG1	Q12167	365 aa	Predicted RBP	13.08	□□□□□ -0.32
PEX25	YPL112C	SNU66	Q12420	587 aa	Predicted RBP	13.08	□□□□□ -0.32
PEX25	YPL112C	AFG2	P32794	780 aa		13.07	□□□□□ -0.32
PEX25	YPL112C	VHR2	P40041	505 aa		13.06	□□□□□ -0.32
PEX25	YPL112C	GSM1	P42950	618 aa		13.06	□□□□□ -0.32
PEX25	YPL112C	VPS4	P52917	437 aa		13.06	□□□□□ -0.32
PEX25	YPL112C	SRC1	Q03707	834 aa		13.06	□□□□□ -0.32
PEX25	YPL112C	STV1	P37296	890 aa		13.05	□□□□□ -0.32
PEX25	YPL112C	IRC4	Q03036	179 aa		13.04	□□□□□ -0.32
PEX25	YPL112C	FLO11	P08640	1367 aa		13.04	□□□□□ -0.32
PEX25	YPL112C	SEN54	Q02825	467 aa	Predicted RBP	13.03	□□□□□ -0.32
PEX25	YPL112C	CRF1	Q04930	467 aa		13.03	□□□□□ -0.32
PEX25	YPL112C	HPR1	P17629	752 aa	Known RBP	13.02	□□□□□ -0.33
PEX25	YPL112C	PRS1	P32895	427 aa	Known RBP	13.02	□□□□□ -0.33
PEX25	YPL112C	RAD2	P07276	1031 aa		13.01	□□□□□ -0.33
PEX25	YPL112C	SLA1	P32790	1244 aa		13.01	□□□□□ -0.33
PEX25	YPL112C	EMP47	P43555	445 aa		13.01	□□□□□ -0.33

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms