RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W VPS64Q03944 604 aa3.69□□□□□ -1.82
RPA190YOR341W PIF1P07271 859 aa3.69□□□□□ -1.82
RPA190YOR341W SIT4P20604 311 aa3.69□□□□□ -1.82
RPA190YOR341W DNM1P54861 757 aa3.69□□□□□ -1.82
RPA190YOR341W FOX2Q02207 900 aaKnown RBP3.69□□□□□ -1.82
RPA190YOR341W SSF1P38789 453 aaPredicted RBP3.69□□□□□ -1.82
RPA190YOR341W RCR1P38212 213 aa3.68□□□□□ -1.82
RPA190YOR341W FMP30Q02883 468 aa3.68□□□□□ -1.82
RPA190YOR341W SYF1Q04048 859 aaPredicted RBP3.68□□□□□ -1.82
RPA190YOR341W THS1P04801 734 aaKnown RBP3.68□□□□□ -1.82
RPA190YOR341W YKR023WP36119 530 aaKnown RBP3.68□□□□□ -1.82
RPA190YOR341W GEF1P37020 779 aa3.68□□□□□ -1.82
RPA190YOR341W PUS6P53294 404 aa3.68□□□□□ -1.82
RPA190YOR341W DSD1P53095 428 aa3.68□□□□□ -1.82
RPA190YOR341W CLF1Q12309 687 aaPredicted RBP3.68□□□□□ -1.82
RPA190YOR341W SMY2P32909 740 aaKnown RBP3.67□□□□□ -1.82
RPA190YOR341W PIP2P52960 996 aa3.67□□□□□ -1.82
RPA190YOR341W YRB30P53107 440 aaPredicted RBP3.67□□□□□ -1.82
RPA190YOR341W DPH6Q12429 685 aa3.67□□□□□ -1.82
RPA190YOR341W OSM1P21375 501 aaKnown RBP3.67□□□□□ -1.82
RPA190YOR341W AKL1P38080 1108 aaKnown RBP3.67□□□□□ -1.82
RPA190YOR341W RGD1P38339 666 aa3.67□□□□□ -1.82
RPA190YOR341W BRE1Q07457 700 aaKnown RBP3.67□□□□□ -1.82
RPA190YOR341W APL2P36000 726 aaPredicted RBP3.67□□□□□ -1.82
RPA190YOR341W CST9Q06032 482 aa3.67□□□□□ -1.82
RPA190YOR341W ATG20Q07528 640 aa3.67□□□□□ -1.82
RPA190YOR341W SPR3P41901 512 aa3.66□□□□□ -1.82
RPA190YOR341W GYP7P48365 746 aa3.66□□□□□ -1.82
RPA190YOR341W LYS4P49367 693 aaPredicted RBP3.66□□□□□ -1.82
RPA190YOR341W ESF1Q06344 628 aaKnown RBP3.66□□□□□ -1.82
RPA190YOR341W CTI6Q08923 506 aa3.66□□□□□ -1.82
RPA190YOR341W TYW1Q08960 810 aaKnown RBP3.66□□□□□ -1.82
RPA190YOR341W RAD2P07276 1031 aa3.66□□□□□ -1.82
RPA190YOR341W KGD2P19262 463 aaPredicted RBP3.66□□□□□ -1.82
RPA190YOR341W ADR1P07248 1323 aa3.66□□□□□ -1.82
RPA190YOR341W NCS6P53088 359 aa3.66□□□□□ -1.82
RPA190YOR341W AUS1Q08409 1394 aa3.66□□□□□ -1.82
RPA190YOR341W MET7Q08645 548 aa3.66□□□□□ -1.82
RPA190YOR341W GIN4Q12263 1142 aa3.66□□□□□ -1.82
RPA190YOR341W RPP0P05317 312 aaKnown RBP3.66□□□□□ -1.82
RPA190YOR341W AFG2P32794 780 aa3.66□□□□□ -1.82
RPA190YOR341W PEA2P40091 420 aa3.66□□□□□ -1.82
RPA190YOR341W TRM44Q02648 567 aaKnown RBP3.66□□□□□ -1.82
RPA190YOR341W PUS5Q06244 254 aa3.65□□□□□ -1.82
RPA190YOR341W SSM4P40318 1319 aa3.65□□□□□ -1.82
RPA190YOR341W SDH2P21801 266 aa3.65□□□□□ -1.82
RPA190YOR341W PAH1P32567 862 aa3.65□□□□□ -1.82
RPA190YOR341W TPM2P40414 161 aa3.65□□□□□ -1.82
RPA190YOR341W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
RPA190YOR341W LDH1P38139 375 aa3.64□□□□□ -1.83
RPA190YOR341W ERT1P38140 529 aa3.64□□□□□ -1.83
RPA190YOR341W FKH1P40466 484 aa3.64□□□□□ -1.83
RPA190YOR341W YNL050CP53952 270 aa3.64□□□□□ -1.83
RPA190YOR341W RBA50Q04418 439 aa3.64□□□□□ -1.83
RPA190YOR341W SGD1Q06132 899 aa3.64□□□□□ -1.83
RPA190YOR341W YLL066CQ99208 1374 aa3.64□□□□□ -1.83
RPA190YOR341W ERG12P07277 443 aa3.64□□□□□ -1.83
RPA190YOR341W ALG2P43636 503 aa3.64□□□□□ -1.83
RPA190YOR341W SES1P07284 462 aaKnown RBP3.64□□□□□ -1.83
RPA190YOR341W PPH3P32345 308 aa3.64□□□□□ -1.83
RPA190YOR341W CST6P40535 587 aa3.64□□□□□ -1.83
RPA190YOR341W TUM1Q08686 304 aaKnown RBP3.64□□□□□ -1.83
RPA190YOR341W LYS2P07702 1392 aa3.64□□□□□ -1.83
RPA190YOR341W PER1P25625 357 aa3.63□□□□□ -1.83
RPA190YOR341W SEC8P32855 1065 aa3.63□□□□□ -1.83
RPA190YOR341W TOM71P38825 639 aaKnown RBP3.63□□□□□ -1.83
RPA190YOR341W NPR2P39923 615 aa3.63□□□□□ -1.83
RPA190YOR341W AFT1P22149 690 aa3.63□□□□□ -1.83
RPA190YOR341W OCT1P35999 772 aa3.63□□□□□ -1.83
RPA190YOR341W MSH4P40965 878 aaPredicted RBP3.63□□□□□ -1.83
RPA190YOR341W EMP47P43555 445 aa3.63□□□□□ -1.83
RPA190YOR341W YGL082WP53155 381 aa3.63□□□□□ -1.83
RPA190YOR341W FBP1P09201 348 aa3.63□□□□□ -1.83
RPA190YOR341W SLN1P39928 1220 aaPredicted RBP3.63□□□□□ -1.83
RPA190YOR341W IOC3P43596 787 aa3.63□□□□□ -1.83
RPA190YOR341W SUB2Q07478 446 aaKnown RBP3.63□□□□□ -1.83
RPA190YOR341W TIM23P32897 222 aa3.63□□□□□ -1.83
RPA190YOR341W YKR075CP36155 307 aa3.63□□□□□ -1.83
RPA190YOR341W PSH1Q12161 406 aa3.63□□□□□ -1.83
RPA190YOR341W YDR341CQ05506 607 aaKnown RBP3.62□□□□□ -1.83
RPA190YOR341W KEX1P09620 729 aa3.62□□□□□ -1.83
RPA190YOR341W EAF6P47128 113 aa3.62□□□□□ -1.83
RPA190YOR341W LSB1P53281 241 aa3.62□□□□□ -1.83
RPA190YOR341W MRD1Q06106 887 aaKnown RBP3.62□□□□□ -1.83
RPA190YOR341W TY1B-AO13527 1196 aaKnown RBP3.62□□□□□ -1.83
RPA190YOR341W SPT2P06843 333 aaPredicted RBP3.62□□□□□ -1.83
RPA190YOR341W MAC1P35192 417 aa3.62□□□□□ -1.83
RPA190YOR341W ADE16P54113 591 aaKnown RBP3.62□□□□□ -1.83
RPA190YOR341W CDC19P00549 500 aaKnown RBP3.62□□□□□ -1.83
RPA190YOR341W MPH3P0CE00 602 aa3.62□□□□□ -1.83
RPA190YOR341W ICL1P28240 557 aaPredicted RBP3.62□□□□□ -1.83
RPA190YOR341W MMF1P40185 145 aaKnown RBP3.62□□□□□ -1.83
RPA190YOR341W IOC4Q04213 475 aa3.62□□□□□ -1.83
RPA190YOR341W OSH3P38713 996 aaKnown RBP3.61□□□□□ -1.83
RPA190YOR341W CDC45Q08032 650 aa3.61□□□□□ -1.83
RPA190YOR341W PDR18P53756 1333 aa3.61□□□□□ -1.83
RPA190YOR341W HEM1P09950 548 aaPredicted RBP3.61□□□□□ -1.83
RPA190YOR341W SNA3P14359 133 aa3.61□□□□□ -1.83
RPA190YOR341W FRD1P32614 470 aaKnown RBP3.61□□□□□ -1.83
RPA190YOR341W MDL2P33311 773 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms