RNA–Protein interactions for RNA: YOL031C

SIL1, Transcript of Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p, yeast

Gene SIL1, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIL1	YOL031C	GRS1	P38088	690 aa	Known RBP	5.04	□□□□□ -1.6
SIL1	YOL031C	YHL050C	P38721	697 aa		5.04	□□□□□ -1.6
SIL1	YOL031C	YHR219W	P38900	624 aa		5.04	□□□□□ -1.6
SIL1	YOL031C	SCW11	P53189	542 aa		5.04	□□□□□ -1.6
SIL1	YOL031C	PUS6	P53294	404 aa		5.04	□□□□□ -1.6
SIL1	YOL031C	FUR4	P05316	633 aa	Known RBP	5.03	□□□□□ -1.6
SIL1	YOL031C	RRP14	P36080	434 aa	Known RBP	5.03	□□□□□ -1.6
SIL1	YOL031C	PPX1	P38698	397 aa		5.03	□□□□□ -1.6
SIL1	YOL031C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SIL1	YOL031C	TBF1	Q02457	562 aa		5.03	□□□□□ -1.6
SIL1	YOL031C	JIP5	Q06214	492 aa	Predicted RBP	5.03	□□□□□ -1.6
SIL1	YOL031C	YDL206W	Q12424	762 aa		5.03	□□□□□ -1.6
SIL1	YOL031C	PDC1	P06169	563 aa	Known RBP	5.02	□□□□□ -1.61
SIL1	YOL031C	PEP12	P32854	288 aa		5.02	□□□□□ -1.61
SIL1	YOL031C	RSC30	P38781	883 aa		5.02	□□□□□ -1.61
SIL1	YOL031C	PTK2	P47116	818 aa	Known RBP	5.02	□□□□□ -1.61
SIL1	YOL031C	OYE2	Q03558	400 aa	Known RBP	5.02	□□□□□ -1.61
SIL1	YOL031C	HAP4	P14064	554 aa		5.01	□□□□□ -1.61
SIL1	YOL031C	SBP1	P10080	294 aa	Known RBP	5	□□□□□ -1.61
SIL1	YOL031C	PPG1	P32838	368 aa		5	□□□□□ -1.61
SIL1	YOL031C	SEC8	P32855	1065 aa		5	□□□□□ -1.61
SIL1	YOL031C	ALD4	P46367	519 aa	Known RBP	5	□□□□□ -1.61
SIL1	YOL031C	MCM16	Q12262	181 aa		5	□□□□□ -1.61
SIL1	YOL031C	PHO87	P25360	923 aa		4.99	□□□□□ -1.61
SIL1	YOL031C	HXT10	P43581	546 aa		4.99	□□□□□ -1.61
SIL1	YOL031C	ATG1	P53104	897 aa		4.99	□□□□□ -1.61
SIL1	YOL031C	NSG2	P53898	299 aa		4.99	□□□□□ -1.61
SIL1	YOL031C	FAR11	P53917	953 aa		4.99	□□□□□ -1.61
SIL1	YOL031C	PNP1	Q05788	311 aa		4.99	□□□□□ -1.61
SIL1	YOL031C	YOL098C	Q12496	1037 aa		4.99	□□□□□ -1.61
SIL1	YOL031C	TRL1	P09880	827 aa	Known RBP	4.98	□□□□□ -1.61
SIL1	YOL031C	TPD3	P31383	635 aa		4.98	□□□□□ -1.61
SIL1	YOL031C	SRP40	P32583	406 aa	Predicted RBP	4.98	□□□□□ -1.61
SIL1	YOL031C	FPR3	P38911	411 aa	Known RBP	4.98	□□□□□ -1.61
SIL1	YOL031C	KXD1	P53158	218 aa		4.98	□□□□□ -1.61
SIL1	YOL031C	RTS3	P53289	263 aa		4.98	□□□□□ -1.61
SIL1	YOL031C	SUB1	P54000	292 aa	Known RBP	4.98	□□□□□ -1.61
SIL1	YOL031C	STE20	Q03497	939 aa	Known RBP	4.98	□□□□□ -1.61
SIL1	YOL031C	CWC15	Q03772	175 aa	Known RBP	4.98	□□□□□ -1.61
SIL1	YOL031C	YPR097W	Q06839	1073 aa		4.98	□□□□□ -1.61
SIL1	YOL031C	PUN1	Q06991	263 aa		4.98	□□□□□ -1.61
SIL1	YOL031C	SRS2	P12954	1174 aa		4.97	□□□□□ -1.61
SIL1	YOL031C	MAD1	P40957	749 aa		4.97	□□□□□ -1.61
SIL1	YOL031C	MDJ2	P42834	146 aa		4.97	□□□□□ -1.61
SIL1	YOL031C	EMP47	P43555	445 aa		4.97	□□□□□ -1.61
SIL1	YOL031C	ACF4	P47129	309 aa		4.97	□□□□□ -1.61
SIL1	YOL031C	RPA14	P50106	137 aa		4.97	□□□□□ -1.61
SIL1	YOL031C	RNH70	P53331	553 aa		4.97	□□□□□ -1.61
SIL1	YOL031C	RRP15	Q06511	250 aa	Predicted RBP	4.97	□□□□□ -1.61
SIL1	YOL031C	ATE1	P16639	503 aa		4.96	□□□□□ -1.62
SIL1	YOL031C	VAN1	P23642	535 aa		4.96	□□□□□ -1.62
SIL1	YOL031C	GUT2	P32191	649 aa		4.96	□□□□□ -1.62
SIL1	YOL031C	GLO3	P38682	493 aa	Known RBP	4.96	□□□□□ -1.62
SIL1	YOL031C	MIP1	P15801	1254 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	CLN2	P20438	545 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	ISF1	P32488	338 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	NUG1	P40010	520 aa	Known RBP	4.95	□□□□□ -1.62
SIL1	YOL031C	YFL066C	P43538	392 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	YFL034W	P43564	1073 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	NUP85	P46673	744 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	SYH1	Q02875	849 aa	Known RBP	4.95	□□□□□ -1.62
SIL1	YOL031C	ALR1	Q08269	859 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	WRS1	Q12109	432 aa	Known RBP	4.95	□□□□□ -1.62
SIL1	YOL031C	TRS33	Q99394	268 aa		4.95	□□□□□ -1.62
SIL1	YOL031C	RDS2	P19541	446 aa	Known RBP	4.94	□□□□□ -1.62
SIL1	YOL031C	YJL049W	P47048	450 aa		4.94	□□□□□ -1.62
SIL1	YOL031C	CWH41	P53008	833 aa		4.94	□□□□□ -1.62
SIL1	YOL031C	UTP13	Q05946	817 aa	Known RBP	4.94	□□□□□ -1.62
SIL1	YOL031C	GAS4	Q08271	471 aa		4.94	□□□□□ -1.62
SIL1	YOL031C	TEC1	P18412	486 aa		4.93	□□□□□ -1.62
SIL1	YOL031C	MET1	P36150	593 aa		4.93	□□□□□ -1.62
SIL1	YOL031C	QDR1	P40475	563 aa		4.93	□□□□□ -1.62
SIL1	YOL031C	YJR107W	P47145	328 aa		4.93	□□□□□ -1.62
SIL1	YOL031C	YOR131C	Q12486	218 aa		4.93	□□□□□ -1.62
SIL1	YOL031C	SRF1	Q12516	437 aa		4.93	□□□□□ -1.62
SIL1	YOL031C	TSC13	Q99190	310 aa		4.93	□□□□□ -1.62
SIL1	YOL031C	UGA3	P26370	528 aa		4.92	□□□□□ -1.62
SIL1	YOL031C	YKL091C	P33324	310 aa	Known RBP	4.92	□□□□□ -1.62
SIL1	YOL031C	SPR3	P41901	512 aa		4.92	□□□□□ -1.62
SIL1	YOL031C	RMD1	Q03441	430 aa		4.92	□□□□□ -1.62
SIL1	YOL031C	NUT2	Q06213	157 aa		4.92	□□□□□ -1.62
SIL1	YOL031C	WHI5	Q12416	295 aa		4.92	□□□□□ -1.62
SIL1	YOL031C	TOM20	P35180	183 aa		4.91	□□□□□ -1.62
SIL1	YOL031C	TPS3	P38426	1054 aa	Known RBP	4.91	□□□□□ -1.62
SIL1	YOL031C	VAC8	P39968	578 aa		4.91	□□□□□ -1.62
SIL1	YOL031C	VPS72	Q03388	795 aa		4.91	□□□□□ -1.62
SIL1	YOL031C	KIP2	P28743	706 aa		4.9	□□□□□ -1.63
SIL1	YOL031C	GCD6	P32501	712 aa	Known RBP	4.9	□□□□□ -1.63
SIL1	YOL031C	PEP7	P32609	515 aa		4.9	□□□□□ -1.63
SIL1	YOL031C	SOH1	P38633	127 aa		4.9	□□□□□ -1.63
SIL1	YOL031C	ACS2	P52910	683 aa	Known RBP	4.9	□□□□□ -1.63
SIL1	YOL031C	YRB30	P53107	440 aa	Predicted RBP	4.9	□□□□□ -1.63
SIL1	YOL031C	POB3	Q04636	552 aa	Known RBP	4.9	□□□□□ -1.63
SIL1	YOL031C	FRA1	Q07825	749 aa		4.9	□□□□□ -1.63
SIL1	YOL031C	STB3	Q12427	513 aa		4.9	□□□□□ -1.63
SIL1	YOL031C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SIL1	YOL031C	PDI1	P17967	522 aa	Known RBP	4.89	□□□□□ -1.63
SIL1	YOL031C	IXR1	P33417	597 aa		4.89	□□□□□ -1.63
SIL1	YOL031C	FIG4	P42837	879 aa		4.89	□□□□□ -1.63
SIL1	YOL031C	YJR008W	P47085	338 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms