RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	MNL2	Q12205	849 aa		4.65	□□□□□ -1.67
FRE4	YNR060W	BDP1	P46678	594 aa		4.64	□□□□□ -1.67
FRE4	YNR060W	RNH70	P53331	553 aa		4.64	□□□□□ -1.67
FRE4	YNR060W	IXR1	P33417	597 aa		4.64	□□□□□ -1.67
FRE4	YNR060W	ACF4	P47129	309 aa		4.64	□□□□□ -1.67
FRE4	YNR060W	JIP5	Q06214	492 aa	Predicted RBP	4.64	□□□□□ -1.67
FRE4	YNR060W	ENV9	Q08651	330 aa		4.64	□□□□□ -1.67
FRE4	YNR060W	QDR1	P40475	563 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	FYV10	P40492	516 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	IOC3	P43596	787 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	THI12	P42883	340 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	THI5	P43534	340 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	THI11	P47183	340 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	ALD3	P54114	506 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	THI13	Q07748	340 aa		4.63	□□□□□ -1.67
FRE4	YNR060W	SRS2	P12954	1174 aa		4.62	□□□□□ -1.67
FRE4	YNR060W	HAP4	P14064	554 aa		4.62	□□□□□ -1.67
FRE4	YNR060W	MRF1	P30775	413 aa	Predicted RBP	4.62	□□□□□ -1.67
FRE4	YNR060W	SOH1	P38633	127 aa		4.62	□□□□□ -1.67
FRE4	YNR060W	PUS5	Q06244	254 aa		4.62	□□□□□ -1.67
FRE4	YNR060W	GPI13	Q07830	1017 aa		4.62	□□□□□ -1.67
FRE4	YNR060W	EMW1	P42842	904 aa	Known RBP	4.61	□□□□□ -1.67
FRE4	YNR060W	MGE1	P38523	228 aa		4.61	□□□□□ -1.67
FRE4	YNR060W	GLO3	P38682	493 aa	Known RBP	4.61	□□□□□ -1.67
FRE4	YNR060W	FUR4	P05316	633 aa	Known RBP	4.6	□□□□□ -1.67
FRE4	YNR060W	CIT2	P08679	460 aa		4.6	□□□□□ -1.67
FRE4	YNR060W	SUV3	P32580	737 aa		4.6	□□□□□ -1.67
FRE4	YNR060W	VAC8	P39968	578 aa		4.6	□□□□□ -1.67
FRE4	YNR060W	PUN1	Q06991	263 aa		4.6	□□□□□ -1.67
FRE4	YNR060W	GAS4	Q08271	471 aa		4.6	□□□□□ -1.67
FRE4	YNR060W	LSO1	Q3E827	93 aa		4.6	□□□□□ -1.67
FRE4	YNR060W	TSC13	Q99190	310 aa		4.6	□□□□□ -1.67
FRE4	YNR060W	MRT4	P33201	236 aa	Known RBP	4.59	□□□□□ -1.67
FRE4	YNR060W	VPS16	Q03308	798 aa		4.59	□□□□□ -1.67
FRE4	YNR060W	ISR1	Q06098	443 aa	Known RBP	4.59	□□□□□ -1.67
FRE4	YNR060W	BOI1	P38041	980 aa	Known RBP	4.58	□□□□□ -1.68
FRE4	YNR060W	NUG1	P40010	520 aa	Known RBP	4.58	□□□□□ -1.68
FRE4	YNR060W	ALD6	P54115	500 aa	Known RBP	4.58	□□□□□ -1.68
FRE4	YNR060W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
FRE4	YNR060W	PIN2	Q12057	282 aa		4.58	□□□□□ -1.68
FRE4	YNR060W	PHO4	P07270	312 aa	Known RBP	4.58	□□□□□ -1.68
FRE4	YNR060W	ATG3	P40344	310 aa		4.58	□□□□□ -1.68
FRE4	YNR060W	BUD6	P41697	788 aa		4.58	□□□□□ -1.68
FRE4	YNR060W	YJR008W	P47085	338 aa		4.58	□□□□□ -1.68
FRE4	YNR060W	SPR28	Q04921	423 aa		4.58	□□□□□ -1.68
FRE4	YNR060W	HDA3	Q06623	655 aa		4.58	□□□□□ -1.68
FRE4	YNR060W	ATG20	Q07528	640 aa		4.58	□□□□□ -1.68
FRE4	YNR060W	SSF2	Q12153	453 aa	Predicted RBP	4.58	□□□□□ -1.68
FRE4	YNR060W	DPS1	P04802	557 aa	Known RBP	4.57	□□□□□ -1.68
FRE4	YNR060W	AMS1	P22855	1083 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	SWE1	P32944	819 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	EBP2	P36049	427 aa	Known RBP	4.57	□□□□□ -1.68
FRE4	YNR060W	CLA4	P48562	842 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	ALG12	P53730	551 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	APP1	P53933	587 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	FRK1	Q03002	865 aa	Predicted RBP	4.57	□□□□□ -1.68
FRE4	YNR060W	MIP1	P15801	1254 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	MCM2	P29469	868 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	SYH1	Q02875	849 aa	Known RBP	4.57	□□□□□ -1.68
FRE4	YNR060W	RPN4	Q03465	531 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	UBX5	Q06682	500 aa		4.57	□□□□□ -1.68
FRE4	YNR060W	RAS1	P01119	309 aa		4.56	□□□□□ -1.68
FRE4	YNR060W	PDI1	P17967	522 aa	Known RBP	4.56	□□□□□ -1.68
FRE4	YNR060W	TRS120	Q04183	1289 aa		4.56	□□□□□ -1.68
FRE4	YNR060W	YBL086C	P38177	466 aa		4.55	□□□□□ -1.68
FRE4	YNR060W	TAT2	P38967	592 aa		4.55	□□□□□ -1.68
FRE4	YNR060W	DAK2	P43550	591 aa		4.55	□□□□□ -1.68
FRE4	YNR060W	RTS3	P53289	263 aa		4.55	□□□□□ -1.68
FRE4	YNR060W	SPT2	P06843	333 aa	Predicted RBP	4.55	□□□□□ -1.68
FRE4	YNR060W	SRP40	P32583	406 aa	Predicted RBP	4.55	□□□□□ -1.68
FRE4	YNR060W	KTR2	P33550	425 aa		4.55	□□□□□ -1.68
FRE4	YNR060W	AIM9	P40053	627 aa	Known RBP	4.55	□□□□□ -1.68
FRE4	YNR060W	ISU1	Q03020	165 aa		4.55	□□□□□ -1.68
FRE4	YNR060W	NSE3	Q05541	303 aa		4.55	□□□□□ -1.68
FRE4	YNR060W	UBP1	P25037	809 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	KIP2	P28743	706 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	FBP26	P32604	452 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	PPG1	P32838	368 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	RPT1	P33299	467 aa	Known RBP	4.54	□□□□□ -1.68
FRE4	YNR060W	RRP14	P36080	434 aa	Known RBP	4.54	□□□□□ -1.68
FRE4	YNR060W	FPR3	P38911	411 aa	Known RBP	4.54	□□□□□ -1.68
FRE4	YNR060W	APC11	Q12157	165 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	STE6	P12866	1290 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	VAN1	P23642	535 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	HED1	Q03937	162 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	MET32	Q12041	191 aa		4.54	□□□□□ -1.68
FRE4	YNR060W	YKL091C	P33324	310 aa	Known RBP	4.53	□□□□□ -1.68
FRE4	YNR060W	TOM20	P35180	183 aa		4.53	□□□□□ -1.68
FRE4	YNR060W	MTO1	P53070	669 aa		4.53	□□□□□ -1.68
FRE4	YNR060W	RMD1	Q03441	430 aa		4.53	□□□□□ -1.68
FRE4	YNR060W	TRS33	Q99394	268 aa		4.53	□□□□□ -1.68
FRE4	YNR060W	SWI5	P08153	709 aa		4.52	□□□□□ -1.69
FRE4	YNR060W	CAB3	P36076	571 aa		4.52	□□□□□ -1.69
FRE4	YNR060W	YJL049W	P47048	450 aa		4.52	□□□□□ -1.69
FRE4	YNR060W	TOS4	Q06266	489 aa		4.52	□□□□□ -1.69
FRE4	YNR060W	BDF2	Q07442	638 aa		4.52	□□□□□ -1.69
FRE4	YNR060W	AIR1	P40507	360 aa	Known RBP	4.51	□□□□□ -1.69
FRE4	YNR060W	SPR3	P41901	512 aa		4.51	□□□□□ -1.69
FRE4	YNR060W	YPQ2	Q06328	317 aa		4.51	□□□□□ -1.69
FRE4	YNR060W	TSR4	P25040	408 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms