RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	NUT2	Q06213	157 aa		4.77	□□□□□ -1.65
PEX6	YNL329C	WHI5	Q12416	295 aa		4.77	□□□□□ -1.65
PEX6	YNL329C	SEC8	P32855	1065 aa		4.76	□□□□□ -1.65
PEX6	YNL329C	SYH1	Q02875	849 aa	Known RBP	4.76	□□□□□ -1.65
PEX6	YNL329C	YML082W	Q04533	649 aa	Known RBP	4.76	□□□□□ -1.65
PEX6	YNL329C	SWI5	P08153	709 aa		4.76	□□□□□ -1.65
PEX6	YNL329C	ISC10	P32645	267 aa		4.76	□□□□□ -1.65
PEX6	YNL329C	AIR2	Q12476	344 aa	Known RBP	4.76	□□□□□ -1.65
PEX6	YNL329C	FRT1	Q99332	602 aa		4.76	□□□□□ -1.65
PEX6	YNL329C	MRF1	P30775	413 aa	Predicted RBP	4.75	□□□□□ -1.65
PEX6	YNL329C	PPX1	P38698	397 aa		4.75	□□□□□ -1.65
PEX6	YNL329C	SAS4	Q04003	481 aa		4.75	□□□□□ -1.65
PEX6	YNL329C	ACF4	P47129	309 aa		4.74	□□□□□ -1.65
PEX6	YNL329C	SUT1	P53032	299 aa	Known RBP	4.74	□□□□□ -1.65
PEX6	YNL329C	PEP7	P32609	515 aa		4.74	□□□□□ -1.65
PEX6	YNL329C	BDP1	P46678	594 aa		4.74	□□□□□ -1.65
PEX6	YNL329C	CHL1	P22516	861 aa	Predicted RBP	4.74	□□□□□ -1.65
PEX6	YNL329C	MET1	P36150	593 aa		4.74	□□□□□ -1.65
PEX6	YNL329C	MOD5	P07884	428 aa		4.73	□□□□□ -1.65
PEX6	YNL329C	TPD3	P31383	635 aa		4.73	□□□□□ -1.65
PEX6	YNL329C	UTP7	P40055	554 aa	Known RBP	4.73	□□□□□ -1.65
PEX6	YNL329C	DFG5	Q05031	458 aa		4.73	□□□□□ -1.65
PEX6	YNL329C	SVF1	Q05515	481 aa		4.73	□□□□□ -1.65
PEX6	YNL329C	BUD31	P25337	157 aa	Predicted RBP	4.72	□□□□□ -1.65
PEX6	YNL329C	ORC1	P54784	914 aa	Predicted RBP	4.72	□□□□□ -1.65
PEX6	YNL329C	ISU1	Q03020	165 aa		4.72	□□□□□ -1.65
PEX6	YNL329C	RPP2B	P02400	110 aa	Known RBP	4.72	□□□□□ -1.65
PEX6	YNL329C	SUV3	P32580	737 aa		4.72	□□□□□ -1.65
PEX6	YNL329C	BDS1	Q08347	646 aa		4.72	□□□□□ -1.65
PEX6	YNL329C	SPR3	P41901	512 aa		4.71	□□□□□ -1.65
PEX6	YNL329C	EMW1	P42842	904 aa	Known RBP	4.71	□□□□□ -1.65
PEX6	YNL329C	RPB10	P22139	70 aa		4.71	□□□□□ -1.66
PEX6	YNL329C	SIS1	P25294	352 aa	Known RBP	4.71	□□□□□ -1.66
PEX6	YNL329C	FBP26	P32604	452 aa		4.71	□□□□□ -1.66
PEX6	YNL329C	BOI1	P38041	980 aa	Known RBP	4.71	□□□□□ -1.66
PEX6	YNL329C	YBR197C	P38306	217 aa		4.71	□□□□□ -1.66
PEX6	YNL329C	DLD3	P39976	496 aa	Known RBP	4.71	□□□□□ -1.66
PEX6	YNL329C	ALA1	P40825	983 aa	Known RBP	4.71	□□□□□ -1.66
PEX6	YNL329C	NGR1	P32831	672 aa	Known RBP	4.7	□□□□□ -1.66
PEX6	YNL329C	RPT1	P33299	467 aa	Known RBP	4.7	□□□□□ -1.66
PEX6	YNL329C	LSO1	Q3E827	93 aa		4.7	□□□□□ -1.66
PEX6	YNL329C	SPT2	P06843	333 aa	Predicted RBP	4.7	□□□□□ -1.66
PEX6	YNL329C	TRS120	Q04183	1289 aa		4.7	□□□□□ -1.66
PEX6	YNL329C	MCM2	P29469	868 aa		4.69	□□□□□ -1.66
PEX6	YNL329C	MET4	P32389	672 aa		4.69	□□□□□ -1.66
PEX6	YNL329C	MAD1	P40957	749 aa		4.69	□□□□□ -1.66
PEX6	YNL329C	WTM2	Q12206	467 aa		4.69	□□□□□ -1.66
PEX6	YNL329C	RRP15	Q06511	250 aa	Predicted RBP	4.69	□□□□□ -1.66
PEX6	YNL329C	VRP1	P37370	817 aa		4.69	□□□□□ -1.66
PEX6	YNL329C	UBP1	P25037	809 aa		4.68	□□□□□ -1.66
PEX6	YNL329C	CST6	P40535	587 aa		4.68	□□□□□ -1.66
PEX6	YNL329C	SPR28	Q04921	423 aa		4.68	□□□□□ -1.66
PEX6	YNL329C	FYV10	P40492	516 aa		4.67	□□□□□ -1.66
PEX6	YNL329C	CAB1	Q04430	367 aa		4.67	□□□□□ -1.66
PEX6	YNL329C	CWC24	P53769	259 aa		4.66	□□□□□ -1.66
PEX6	YNL329C	UFD2	P54860	961 aa		4.66	□□□□□ -1.66
PEX6	YNL329C	STB3	Q12427	513 aa		4.66	□□□□□ -1.66
PEX6	YNL329C	GCD6	P32501	712 aa	Known RBP	4.65	□□□□□ -1.67
PEX6	YNL329C	NNF1	P47149	201 aa		4.65	□□□□□ -1.67
PEX6	YNL329C	OXR1	Q08952	273 aa		4.65	□□□□□ -1.67
PEX6	YNL329C	Q0182	Q9ZZW1	134 aa		4.65	□□□□□ -1.67
PEX6	YNL329C	RPS26A	P39938	119 aa	Known RBP	4.64	□□□□□ -1.67
PEX6	YNL329C	RPS26B	P39939	119 aa	Known RBP	4.64	□□□□□ -1.67
PEX6	YNL329C	VAC8	P39968	578 aa		4.64	□□□□□ -1.67
PEX6	YNL329C	FIR1	P40020	876 aa		4.64	□□□□□ -1.67
PEX6	YNL329C	ALD6	P54115	500 aa	Known RBP	4.64	□□□□□ -1.67
PEX6	YNL329C	GPI13	Q07830	1017 aa		4.64	□□□□□ -1.67
PEX6	YNL329C	MNL2	Q12205	849 aa		4.64	□□□□□ -1.67
PEX6	YNL329C	MRPL33	P20084	86 aa		4.64	□□□□□ -1.67
PEX6	YNL329C	DAK2	P43550	591 aa		4.64	□□□□□ -1.67
PEX6	YNL329C	YJR107W	P47145	328 aa		4.64	□□□□□ -1.67
PEX6	YNL329C	STE6	P12866	1290 aa		4.63	□□□□□ -1.67
PEX6	YNL329C	UGA3	P26370	528 aa		4.63	□□□□□ -1.67
PEX6	YNL329C	YTA7	P40340	1379 aa		4.63	□□□□□ -1.67
PEX6	YNL329C	LDH1	P38139	375 aa		4.63	□□□□□ -1.67
PEX6	YNL329C	NAP1	P25293	417 aa	Known RBP	4.62	□□□□□ -1.67
PEX6	YNL329C	YTA6	P40328	754 aa		4.62	□□□□□ -1.67
PEX6	YNL329C	SUM1	P46676	1062 aa		4.62	□□□□□ -1.67
PEX6	YNL329C	SAM37	P50110	327 aa		4.62	□□□□□ -1.67
PEX6	YNL329C	PHO4	P07270	312 aa	Known RBP	4.62	□□□□□ -1.67
PEX6	YNL329C	YBL086C	P38177	466 aa		4.62	□□□□□ -1.67
PEX6	YNL329C	HXT8	P40886	569 aa		4.62	□□□□□ -1.67
PEX6	YNL329C	NOC3	Q07896	663 aa	Predicted RBP	4.62	□□□□□ -1.67
PEX6	YNL329C	SMC1	P32908	1225 aa		4.61	□□□□□ -1.67
PEX6	YNL329C	SCD5	P34758	872 aa		4.61	□□□□□ -1.67
PEX6	YNL329C	RGA1	P39083	1007 aa		4.61	□□□□□ -1.67
PEX6	YNL329C	YNL011C	P53980	444 aa		4.61	□□□□□ -1.67
PEX6	YNL329C	WRS1	Q12109	432 aa	Known RBP	4.61	□□□□□ -1.67
PEX6	YNL329C	VMA3	P25515	160 aa		4.61	□□□□□ -1.67
PEX6	YNL329C	ECM2	P38241	364 aa	Known RBP	4.61	□□□□□ -1.67
PEX6	YNL329C	CIC1	P38779	376 aa	Known RBP	4.61	□□□□□ -1.67
PEX6	YNL329C	SDH2	P21801	266 aa		4.6	□□□□□ -1.67
PEX6	YNL329C	SRP40	P32583	406 aa	Predicted RBP	4.6	□□□□□ -1.67
PEX6	YNL329C	HXT5	P38695	592 aa		4.6	□□□□□ -1.67
PEX6	YNL329C	RAD55	P38953	406 aa		4.6	□□□□□ -1.67
PEX6	YNL329C	YHL008C	P38750	627 aa		4.6	□□□□□ -1.67
PEX6	YNL329C	QDR2	P40474	542 aa		4.6	□□□□□ -1.67
PEX6	YNL329C	MAG2	Q06436	670 aa	Known RBP	4.6	□□□□□ -1.67
PEX6	YNL329C	SRF1	Q12516	437 aa		4.6	□□□□□ -1.67
PEX6	YNL329C	MLF3	P32047	452 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms