RNA–Protein interactions for RNA: YNL139C

THO2, Transcript of Subunit of the THO complex, yeast

Gene THO2, Length 4,794 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THO2	YNL139C	YER158C	P40095	573 aa		0.93	□□□□□ -2.26
THO2	YNL139C	EAF1	Q06337	982 aa		0.93	□□□□□ -2.26
THO2	YNL139C	STH1	P32597	1359 aa		0.93	□□□□□ -2.26
THO2	YNL139C	DYN1	P36022	4092 aa		0.93	□□□□□ -2.26
THO2	YNL139C	CUP1-1	P0CX80	61 aa		0.93	□□□□□ -2.26
THO2	YNL139C	CUP1-2	P0CX81	61 aa		0.93	□□□□□ -2.26
THO2	YNL139C	AI2	P03876	854 aa		0.93	□□□□□ -2.26
THO2	YNL139C	NUP85	P46673	744 aa		0.93	□□□□□ -2.26
THO2	YNL139C	VPS29	P38759	282 aa		0.92	□□□□□ -2.26
THO2	YNL139C	ISU2	Q12056	156 aa		0.92	□□□□□ -2.26
THO2	YNL139C	PDI1	P17967	522 aa	Known RBP	0.92	□□□□□ -2.26
THO2	YNL139C	YDR461C-A	Q2V2P7	80 aa		0.92	□□□□□ -2.26
THO2	YNL139C	MSC7	P38694	644 aa		0.92	□□□□□ -2.26
THO2	YNL139C	TIF6	Q12522	245 aa	Known RBP	0.92	□□□□□ -2.26
THO2	YNL139C	TY4B-H	P0C2J7	1802 aa		0.91	□□□□□ -2.26
THO2	YNL139C	GUT1	P32190	709 aa		0.91	□□□□□ -2.26
THO2	YNL139C	ECL1	P48235	211 aa		0.91	□□□□□ -2.26
THO2	YNL139C	YRF1-4	O13559	1382 aa		0.91	□□□□□ -2.26
THO2	YNL139C	MRT4	P33201	236 aa	Known RBP	0.91	□□□□□ -2.26
THO2	YNL139C	ETP1	P38748	585 aa	Known RBP	0.91	□□□□□ -2.26
THO2	YNL139C	IES2	P40154	320 aa		0.91	□□□□□ -2.26
THO2	YNL139C	ART5	P53244	586 aa	Known RBP	0.91	□□□□□ -2.26
THO2	YNL139C	AIR1	P40507	360 aa	Known RBP	0.91	□□□□□ -2.26
THO2	YNL139C	HPF1	Q05164	967 aa		0.91	□□□□□ -2.26
THO2	YNL139C	LAM6	Q08001	693 aa		0.91	□□□□□ -2.26
THO2	YNL139C	TY1A-BL	Q12266	440 aa		0.91	□□□□□ -2.26
THO2	YNL139C	POL3	P15436	1097 aa		0.91	□□□□□ -2.26
THO2	YNL139C	RGT1	P32862	1170 aa		0.91	□□□□□ -2.26
THO2	YNL139C	YAP3	P38749	330 aa		0.91	□□□□□ -2.26
THO2	YNL139C	GYP5	Q12344	894 aa		0.91	□□□□□ -2.26
THO2	YNL139C	PTP1	P25044	335 aa		0.9	□□□□□ -2.26
THO2	YNL139C	SSL1	Q04673	461 aa	Predicted RBP	0.9	□□□□□ -2.26
THO2	YNL139C	PMD1	P32634	1753 aa		0.9	□□□□□ -2.27
THO2	YNL139C	ZDS1	P50111	915 aa	Known RBP	0.9	□□□□□ -2.27
THO2	YNL139C	SEC7	P11075	2009 aa	Known RBP	0.9	□□□□□ -2.27
THO2	YNL139C	RPP1B	P10622	106 aa	Known RBP	0.9	□□□□□ -2.27
THO2	YNL139C	RSC30	P38781	883 aa		0.9	□□□□□ -2.27
THO2	YNL139C	MGA2	P40578	1113 aa		0.9	□□□□□ -2.27
THO2	YNL139C	FPK1	P53739	893 aa		0.9	□□□□□ -2.27
THO2	YNL139C	TLG2	Q08144	397 aa		0.9	□□□□□ -2.27
THO2	YNL139C	SSA2	P10592	639 aa	Known RBP	0.89	□□□□□ -2.27
THO2	YNL139C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
THO2	YNL139C	SFA1	P32771	386 aa		0.89	□□□□□ -2.27
THO2	YNL139C	MAL31	P38156	614 aa		0.89	□□□□□ -2.27
THO2	YNL139C	BSD2	P38356	321 aa		0.89	□□□□□ -2.27
THO2	YNL139C	ADE12	P80210	433 aa	Known RBP	0.89	□□□□□ -2.27
THO2	YNL139C	TY1A-MR1	Q04215	440 aa		0.89	□□□□□ -2.27
THO2	YNL139C	SAP155	P43612	1002 aa		0.89	□□□□□ -2.27
THO2	YNL139C	CTH1	P47976	325 aa		0.89	□□□□□ -2.27
THO2	YNL139C	UBP2	Q01476	1272 aa		0.89	□□□□□ -2.27
THO2	YNL139C	SKI3	P17883	1432 aa	Known RBP	0.89	□□□□□ -2.27
THO2	YNL139C	GAP1	P19145	602 aa	Predicted RBP	0.89	□□□□□ -2.27
THO2	YNL139C	DPL1	Q05567	589 aa		0.89	□□□□□ -2.27
THO2	YNL139C	MET10	P39692	1035 aa		0.88	□□□□□ -2.27
THO2	YNL139C	UTP10	P42945	1769 aa	Known RBP	0.88	□□□□□ -2.27
THO2	YNL139C	MET1	P36150	593 aa		0.88	□□□□□ -2.27
THO2	YNL139C	YMR206W	Q03695	313 aa		0.88	□□□□□ -2.27
THO2	YNL139C	PML39	Q03760	334 aa		0.88	□□□□□ -2.27
THO2	YNL139C	YML133C	Q03099	1374 aa		0.88	□□□□□ -2.27
THO2	YNL139C	PSD2	P53037	1138 aa	Known RBP	0.88	□□□□□ -2.27
THO2	YNL139C	ECM30	Q06673	1274 aa		0.88	□□□□□ -2.27
THO2	YNL139C	KRS1	P15180	591 aa	Known RBP	0.88	□□□□□ -2.27
THO2	YNL139C	TUS1	Q06412	1307 aa		0.87	□□□□□ -2.27
THO2	YNL139C	SSA4	P22202	642 aa	Known RBP	0.87	□□□□□ -2.27
THO2	YNL139C	YBL086C	P38177	466 aa		0.87	□□□□□ -2.27
THO2	YNL139C	ALD3	P54114	506 aa		0.87	□□□□□ -2.27
THO2	YNL139C	ERG12	P07277	443 aa		0.87	□□□□□ -2.27
THO2	YNL139C	ILV6	P25605	309 aa	Known RBP	0.87	□□□□□ -2.27
THO2	YNL139C	MRPS35	P53292	345 aa		0.87	□□□□□ -2.27
THO2	YNL139C	CTT1	P06115	562 aa		0.87	□□□□□ -2.27
THO2	YNL139C	PEX2	P32800	271 aa		0.87	□□□□□ -2.27
THO2	YNL139C	ILV3	P39522	585 aa	Known RBP	0.87	□□□□□ -2.27
THO2	YNL139C	ZAP1	P47043	880 aa		0.87	□□□□□ -2.27
THO2	YNL139C	ARI1	P53111	347 aa	Known RBP	0.87	□□□□□ -2.27
THO2	YNL139C	PDR1	P12383	1068 aa		0.87	□□□□□ -2.27
THO2	YNL139C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
THO2	YNL139C	IMH1	Q06704	911 aa	Known RBP	0.87	□□□□□ -2.27
THO2	YNL139C	RAD59	Q12223	238 aa		0.87	□□□□□ -2.27
THO2	YNL139C	SCW11	P53189	542 aa		0.86	□□□□□ -2.27
THO2	YNL139C	YPR015C	Q12531	247 aa		0.86	□□□□□ -2.27
THO2	YNL139C	YLL067C	Q07888	1374 aa		0.86	□□□□□ -2.27
THO2	YNL139C	RSM7	P47150	247 aa		0.86	□□□□□ -2.27
THO2	YNL139C	ENV11	P53246	860 aa		0.86	□□□□□ -2.27
THO2	YNL139C	GYP1	Q08484	637 aa		0.86	□□□□□ -2.27
THO2	YNL139C	DAP1	Q12091	152 aa		0.86	□□□□□ -2.27
THO2	YNL139C	YMR084W	A2P2R3	262 aa		0.86	□□□□□ -2.27
THO2	YNL139C	MOD5	P07884	428 aa		0.86	□□□□□ -2.27
THO2	YNL139C	ERT1	P38140	529 aa		0.86	□□□□□ -2.27
THO2	YNL139C	PRP43	P53131	767 aa	Known RBP	0.86	□□□□□ -2.27
THO2	YNL139C	TFB4	Q12004	338 aa		0.86	□□□□□ -2.27
THO2	YNL139C	SLP1	Q12232	587 aa		0.86	□□□□□ -2.27
THO2	YNL139C	CCP1	P00431	361 aa		0.85	□□□□□ -2.27
THO2	YNL139C	PRP6	P19735	899 aa	Predicted RBP	0.85	□□□□□ -2.27
THO2	YNL139C	SFB3	P38810	929 aa		0.85	□□□□□ -2.27
THO2	YNL139C	NDJ1	Q12366	352 aa		0.85	□□□□□ -2.27
THO2	YNL139C	KRE5	P22023	1365 aa		0.85	□□□□□ -2.27
THO2	YNL139C	RPL40A	P0CH08	128 aa	Known RBP	0.85	□□□□□ -2.27
THO2	YNL139C	RPL40B	P0CH09	128 aa	Known RBP	0.85	□□□□□ -2.27
THO2	YNL139C	RTG3	P38165	486 aa		0.85	□□□□□ -2.27
THO2	YNL139C	CHS7	P38843	316 aa		0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms