RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	TPS3	P38426	1054 aa	Known RBP	5.85	□□□□□ -1.47
TPM1	YNL079C	DLD3	P39976	496 aa	Known RBP	5.85	□□□□□ -1.47
TPM1	YNL079C	AAD14	P42884	376 aa		5.85	□□□□□ -1.47
TPM1	YNL079C	NGR1	P32831	672 aa	Known RBP	5.84	□□□□□ -1.47
TPM1	YNL079C	PTK2	P47116	818 aa	Known RBP	5.84	□□□□□ -1.47
TPM1	YNL079C	TRS33	Q99394	268 aa		5.84	□□□□□ -1.47
TPM1	YNL079C	UTP7	P40055	554 aa	Known RBP	5.83	□□□□□ -1.48
TPM1	YNL079C	SUM1	P46676	1062 aa		5.83	□□□□□ -1.48
TPM1	YNL079C	YPQ2	Q06328	317 aa		5.83	□□□□□ -1.48
TPM1	YNL079C	PUN1	Q06991	263 aa		5.83	□□□□□ -1.48
TPM1	YNL079C	SRS2	P12954	1174 aa		5.82	□□□□□ -1.48
TPM1	YNL079C	SUV3	P32580	737 aa		5.82	□□□□□ -1.48
TPM1	YNL079C	PNP1	Q05788	311 aa		5.82	□□□□□ -1.48
TPM1	YNL079C	SRF1	Q12516	437 aa		5.82	□□□□□ -1.48
TPM1	YNL079C	NUP85	P46673	744 aa		5.81	□□□□□ -1.48
TPM1	YNL079C	CWH41	P53008	833 aa		5.81	□□□□□ -1.48
TPM1	YNL079C	YML020W	Q03722	664 aa		5.81	□□□□□ -1.48
TPM1	YNL079C	MCM1	P11746	286 aa		5.8	□□□□□ -1.48
TPM1	YNL079C	ALD4	P46367	519 aa	Known RBP	5.8	□□□□□ -1.48
TPM1	YNL079C	HAT1	Q12341	374 aa		5.8	□□□□□ -1.48
TPM1	YNL079C	DLD1	P32891	587 aa		5.79	□□□□□ -1.48
TPM1	YNL079C	SSN3	P39073	555 aa		5.79	□□□□□ -1.48
TPM1	YNL079C	BRE2	P43132	505 aa		5.79	□□□□□ -1.48
TPM1	YNL079C	TCB3	Q03640	1545 aa	Known RBP	5.79	□□□□□ -1.48
TPM1	YNL079C	MSN5	P52918	1224 aa		5.78	□□□□□ -1.48
TPM1	YNL079C	GCR2	Q01722	534 aa		5.78	□□□□□ -1.48
TPM1	YNL079C	HXT5	P38695	592 aa		5.77	□□□□□ -1.49
TPM1	YNL079C	SSF1	P38789	453 aa	Predicted RBP	5.77	□□□□□ -1.49
TPM1	YNL079C	ALA1	P40825	983 aa	Known RBP	5.77	□□□□□ -1.49
TPM1	YNL079C	YJR098C	P47139	656 aa		5.77	□□□□□ -1.49
TPM1	YNL079C	LSC2	P53312	427 aa		5.77	□□□□□ -1.49
TPM1	YNL079C	KAR5	Q04746	504 aa		5.77	□□□□□ -1.49
TPM1	YNL079C	NOP8	Q08287	484 aa	Predicted RBP	5.77	□□□□□ -1.49
TPM1	YNL079C	YBR197C	P38306	217 aa		5.76	□□□□□ -1.49
TPM1	YNL079C	BOL3	P39724	118 aa		5.76	□□□□□ -1.49
TPM1	YNL079C	CAB1	Q04430	367 aa		5.76	□□□□□ -1.49
TPM1	YNL079C	FUR4	P05316	633 aa	Known RBP	5.75	□□□□□ -1.49
TPM1	YNL079C	DAL1	P32375	460 aa		5.75	□□□□□ -1.49
TPM1	YNL079C	RRN6	P32786	894 aa		5.75	□□□□□ -1.49
TPM1	YNL079C	JJJ2	P46997	583 aa		5.75	□□□□□ -1.49
TPM1	YNL079C	VTC4	P47075	721 aa		5.75	□□□□□ -1.49
TPM1	YNL079C	YBL113C	Q7M4S9	792 aa		5.75	□□□□□ -1.49
TPM1	YNL079C	TRL1	P09880	827 aa	Known RBP	5.74	□□□□□ -1.49
TPM1	YNL079C	SLA1	P32790	1244 aa		5.74	□□□□□ -1.49
TPM1	YNL079C	ERP5	P38819	212 aa		5.74	□□□□□ -1.49
TPM1	YNL079C	YNL165W	P53891	406 aa		5.74	□□□□□ -1.49
TPM1	YNL079C	TY1A-DR3	Q12441	440 aa		5.74	□□□□□ -1.49
TPM1	YNL079C	LSO1	Q3E827	93 aa		5.74	□□□□□ -1.49
TPM1	YNL079C	ISC10	P32645	267 aa		5.73	□□□□□ -1.49
TPM1	YNL079C	SCD5	P34758	872 aa		5.73	□□□□□ -1.49
TPM1	YNL079C	FOX2	Q02207	900 aa	Known RBP	5.73	□□□□□ -1.49
TPM1	YNL079C	TCB1	Q12466	1186 aa		5.73	□□□□□ -1.49
TPM1	YNL079C	Q0182	Q9ZZW1	134 aa		5.73	□□□□□ -1.49
TPM1	YNL079C	SPA2	P23201	1466 aa	Known RBP	5.72	□□□□□ -1.49
TPM1	YNL079C	SHM1	P37292	490 aa	Predicted RBP	5.72	□□□□□ -1.49
TPM1	YNL079C	AHP1	P38013	176 aa	Known RBP	5.72	□□□□□ -1.49
TPM1	YNL079C	ATG1	P53104	897 aa		5.72	□□□□□ -1.49
TPM1	YNL079C	YLR346C	Q06139	101 aa		5.72	□□□□□ -1.49
TPM1	YNL079C	OPT2	Q06593	877 aa		5.72	□□□□□ -1.49
TPM1	YNL079C	RPS31	P05759	152 aa	Known RBP	5.71	□□□□□ -1.5
TPM1	YNL079C	MLF3	P32047	452 aa		5.71	□□□□□ -1.5
TPM1	YNL079C	IRE1	P32361	1115 aa		5.71	□□□□□ -1.5
TPM1	YNL079C	BOI1	P38041	980 aa	Known RBP	5.71	□□□□□ -1.5
TPM1	YNL079C	UBP2	Q01476	1272 aa		5.71	□□□□□ -1.5
TPM1	YNL079C	UTP4	Q06679	776 aa	Known RBP	5.71	□□□□□ -1.5
TPM1	YNL079C	SSN2	P38931	1420 aa		5.71	□□□□□ -1.5
TPM1	YNL079C	TY1B-DR4	Q07793	1604 aa		5.7	□□□□□ -1.5
TPM1	YNL079C	MRPL33	P20084	86 aa		5.7	□□□□□ -1.5
TPM1	YNL079C	SLD2	P34252	453 aa		5.7	□□□□□ -1.5
TPM1	YNL079C	GLO3	P38682	493 aa	Known RBP	5.7	□□□□□ -1.5
TPM1	YNL079C	QDR1	P40475	563 aa		5.7	□□□□□ -1.5
TPM1	YNL079C	MDJ2	P42834	146 aa		5.7	□□□□□ -1.5
TPM1	YNL079C	ACF4	P47129	309 aa		5.7	□□□□□ -1.5
TPM1	YNL079C	GLY1	P37303	387 aa	Known RBP	5.69	□□□□□ -1.5
TPM1	YNL079C	GRS1	P38088	690 aa	Known RBP	5.69	□□□□□ -1.5
TPM1	YNL079C	SEN54	Q02825	467 aa	Predicted RBP	5.69	□□□□□ -1.5
TPM1	YNL079C	APC11	Q12157	165 aa		5.69	□□□□□ -1.5
TPM1	YNL079C	MON2	P48563	1636 aa	Predicted RBP	5.68	□□□□□ -1.5
TPM1	YNL079C	MET22	P32179	357 aa		5.68	□□□□□ -1.5
TPM1	YNL079C	STM1	P39015	273 aa	Known RBP	5.68	□□□□□ -1.5
TPM1	YNL079C	YTA6	P40328	754 aa		5.68	□□□□□ -1.5
TPM1	YNL079C	CDC19	P00549	500 aa	Known RBP	5.67	□□□□□ -1.5
TPM1	YNL079C	VMA3	P25515	160 aa		5.67	□□□□□ -1.5
TPM1	YNL079C	PDC6	P26263	563 aa	Known RBP	5.67	□□□□□ -1.5
TPM1	YNL079C	PSH1	Q12161	406 aa		5.67	□□□□□ -1.5
TPM1	YNL079C	TY1A-BL	Q12266	440 aa		5.67	□□□□□ -1.5
TPM1	YNL079C	OSH7	P38755	437 aa		5.66	□□□□□ -1.5
TPM1	YNL079C	RGA1	P39083	1007 aa		5.66	□□□□□ -1.5
TPM1	YNL079C	UBP15	P50101	1230 aa		5.66	□□□□□ -1.5
TPM1	YNL079C	YDR444W	Q04093	687 aa		5.66	□□□□□ -1.5
TPM1	YNL079C	LCB5	Q06147	687 aa	Known RBP	5.66	□□□□□ -1.5
TPM1	YNL079C	LEU1	P07264	779 aa	Known RBP	5.65	□□□□□ -1.5
TPM1	YNL079C	RPB10	P22139	70 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	KAP122	P32767	1081 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	KTR2	P33550	425 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	YHL050C	P38721	697 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	YHR219W	P38900	624 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	QDR2	P40474	542 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	SPR3	P41901	512 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	ALD2	P47771	506 aa		5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms