RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A FRT1Q99332 602 aa6.78□□□□□ -1.32
YNL054W-AYNL054W-A CYT1P07143 309 aa6.77□□□□□ -1.32
YNL054W-AYNL054W-A SWI5P08153 709 aa6.77□□□□□ -1.32
YNL054W-AYNL054W-A ISU1Q03020 165 aa6.77□□□□□ -1.32
YNL054W-AYNL054W-A PUS5Q06244 254 aa6.77□□□□□ -1.32
YNL054W-AYNL054W-A KIP2P28743 706 aa6.76□□□□□ -1.33
YNL054W-AYNL054W-A GLO3P38682 493 aaKnown RBP6.76□□□□□ -1.33
YNL054W-AYNL054W-A MET10P39692 1035 aa6.76□□□□□ -1.33
YNL054W-AYNL054W-A POL32P47110 350 aa6.76□□□□□ -1.33
YNL054W-AYNL054W-A APP1P53933 587 aa6.76□□□□□ -1.33
YNL054W-AYNL054W-A BDP1P46678 594 aa6.76□□□□□ -1.33
YNL054W-AYNL054W-A MRF1P30775 413 aaPredicted RBP6.75□□□□□ -1.33
YNL054W-AYNL054W-A FBP26P32604 452 aa6.75□□□□□ -1.33
YNL054W-AYNL054W-A UTR2P32623 467 aa6.75□□□□□ -1.33
YNL054W-AYNL054W-A MRT4P33201 236 aaKnown RBP6.75□□□□□ -1.33
YNL054W-AYNL054W-A BCK2P33306 851 aa6.75□□□□□ -1.33
YNL054W-AYNL054W-A YBR197CP38306 217 aa6.75□□□□□ -1.33
YNL054W-AYNL054W-A SYH1Q02875 849 aaKnown RBP6.75□□□□□ -1.33
YNL054W-AYNL054W-A STE6P12866 1290 aa6.74□□□□□ -1.33
YNL054W-AYNL054W-A MET4P32389 672 aa6.74□□□□□ -1.33
YNL054W-AYNL054W-A CST6P40535 587 aa6.74□□□□□ -1.33
YNL054W-AYNL054W-A CWH41P53008 833 aa6.74□□□□□ -1.33
YNL054W-AYNL054W-A APC11Q12157 165 aa6.74□□□□□ -1.33
YNL054W-AYNL054W-A STB3Q12427 513 aa6.74□□□□□ -1.33
YNL054W-AYNL054W-A MKS1P34072 584 aa6.73□□□□□ -1.33
YNL054W-AYNL054W-A CAB1Q04430 367 aa6.73□□□□□ -1.33
YNL054W-AYNL054W-A YJR107WP47145 328 aa6.72□□□□□ -1.33
YNL054W-AYNL054W-A YPQ2Q06328 317 aa6.72□□□□□ -1.33
YNL054W-AYNL054W-A GPI13Q07830 1017 aa6.72□□□□□ -1.33
YNL054W-AYNL054W-A WTM2Q12206 467 aa6.72□□□□□ -1.33
YNL054W-AYNL054W-A ISC10P32645 267 aa6.71□□□□□ -1.34
YNL054W-AYNL054W-A YBL086CP38177 466 aa6.71□□□□□ -1.34
YNL054W-AYNL054W-A HXT5P38695 592 aa6.71□□□□□ -1.34
YNL054W-AYNL054W-A MNL2Q12205 849 aa6.71□□□□□ -1.34
YNL054W-AYNL054W-A SEC8P32855 1065 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A KTR2P33550 425 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A SPR3P41901 512 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A THI12P42883 340 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A THI5P43534 340 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A THI11P47183 340 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A TRS120Q04183 1289 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A THI13Q07748 340 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A AIM44Q99299 758 aa6.7□□□□□ -1.34
YNL054W-AYNL054W-A MCM1P11746 286 aa6.69□□□□□ -1.34
YNL054W-AYNL054W-A FRK1Q03002 865 aaPredicted RBP6.69□□□□□ -1.34
YNL054W-AYNL054W-A DFG5Q05031 458 aa6.69□□□□□ -1.34
YNL054W-AYNL054W-A DAT1P13483 248 aaKnown RBP6.68□□□□□ -1.34
YNL054W-AYNL054W-A RPB10P22139 70 aa6.68□□□□□ -1.34
YNL054W-AYNL054W-A TBS1P38114 1094 aa6.68□□□□□ -1.34
YNL054W-AYNL054W-A SVF1Q05515 481 aa6.68□□□□□ -1.34
YNL054W-AYNL054W-A OYE2Q03558 400 aaKnown RBP6.67□□□□□ -1.34
YNL054W-AYNL054W-A RGA2Q06407 1009 aa6.67□□□□□ -1.34
YNL054W-AYNL054W-A PHO4P07270 312 aaKnown RBP6.66□□□□□ -1.34
YNL054W-AYNL054W-A VRP1P37370 817 aa6.66□□□□□ -1.34
YNL054W-AYNL054W-A FOX2Q02207 900 aaKnown RBP6.66□□□□□ -1.34
YNL054W-AYNL054W-A MGE1P38523 228 aa6.65□□□□□ -1.35
YNL054W-AYNL054W-A MRPL33P20084 86 aa6.64□□□□□ -1.35
YNL054W-AYNL054W-A RPP2BP02400 110 aaKnown RBP6.63□□□□□ -1.35
YNL054W-AYNL054W-A OCA5P38738 679 aa6.63□□□□□ -1.35
YNL054W-AYNL054W-A FYV10P40492 516 aa6.63□□□□□ -1.35
YNL054W-AYNL054W-A SUM1P46676 1062 aa6.63□□□□□ -1.35
YNL054W-AYNL054W-A UFD2P54860 961 aa6.63□□□□□ -1.35
YNL054W-AYNL054W-A HED1Q03937 162 aa6.63□□□□□ -1.35
YNL054W-AYNL054W-A BDS1Q08347 646 aa6.63□□□□□ -1.35
YNL054W-AYNL054W-A MET1P36150 593 aa6.62□□□□□ -1.35
YNL054W-AYNL054W-A SCD5P34758 872 aa6.61□□□□□ -1.35
YNL054W-AYNL054W-A UTP7P40055 554 aaKnown RBP6.61□□□□□ -1.35
YNL054W-AYNL054W-A VMA3P25515 160 aa6.59□□□□□ -1.35
YNL054W-AYNL054W-A RTT106P40161 455 aa6.59□□□□□ -1.35
YNL054W-AYNL054W-A DAK2P43550 591 aa6.59□□□□□ -1.35
YNL054W-AYNL054W-A SUT1P53032 299 aaKnown RBP6.59□□□□□ -1.35
YNL054W-AYNL054W-A MAG2Q06436 670 aaKnown RBP6.59□□□□□ -1.35
YNL054W-AYNL054W-A UTP4Q06679 776 aaKnown RBP6.59□□□□□ -1.35
YNL054W-AYNL054W-A MCM2P29469 868 aa6.58□□□□□ -1.36
YNL054W-AYNL054W-A YNL165WP53891 406 aa6.58□□□□□ -1.36
YNL054W-AYNL054W-A YNL011CP53980 444 aa6.58□□□□□ -1.36
YNL054W-AYNL054W-A CDC55Q00362 526 aa6.58□□□□□ -1.36
YNL054W-AYNL054W-A RSC4Q02206 625 aa6.58□□□□□ -1.36
YNL054W-AYNL054W-A MET32Q12041 191 aa6.58□□□□□ -1.36
YNL054W-AYNL054W-A AMS1P22855 1083 aa6.57□□□□□ -1.36
YNL054W-AYNL054W-A YTA7P40340 1379 aa6.57□□□□□ -1.36
YNL054W-AYNL054W-A SMC1P32908 1225 aa6.56□□□□□ -1.36
YNL054W-AYNL054W-A RPT1P33299 467 aaKnown RBP6.56□□□□□ -1.36
YNL054W-AYNL054W-A VPS35P34110 944 aa6.56□□□□□ -1.36
YNL054W-AYNL054W-A DLD3P39976 496 aaKnown RBP6.56□□□□□ -1.36
YNL054W-AYNL054W-A HXT8P40886 569 aa6.56□□□□□ -1.36
YNL054W-AYNL054W-A CLA4P48562 842 aa6.56□□□□□ -1.36
YNL054W-AYNL054W-A SSN3P39073 555 aa6.55□□□□□ -1.36
YNL054W-AYNL054W-A SPR28Q04921 423 aa6.55□□□□□ -1.36
YNL054W-AYNL054W-A Q0182Q9ZZW1 134 aa6.55□□□□□ -1.36
YNL054W-AYNL054W-A RPS31P05759 152 aaKnown RBP6.54□□□□□ -1.36
YNL054W-AYNL054W-A GCD6P32501 712 aaKnown RBP6.54□□□□□ -1.36
YNL054W-AYNL054W-A RMD1Q03441 430 aa6.54□□□□□ -1.36
YNL054W-AYNL054W-A JIP5Q06214 492 aaPredicted RBP6.54□□□□□ -1.36
YNL054W-AYNL054W-A TOS4Q06266 489 aa6.54□□□□□ -1.36
YNL054W-AYNL054W-A LDH1P38139 375 aa6.53□□□□□ -1.36
YNL054W-AYNL054W-A XDJ1P39102 459 aa6.53□□□□□ -1.36
YNL054W-AYNL054W-A RGD2P43556 714 aa6.53□□□□□ -1.36
YNL054W-AYNL054W-A MLF3P32047 452 aa6.52□□□□□ -1.37
YNL054W-AYNL054W-A SHM1P37292 490 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms