RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
HDA1YNL021W SRS2P12954 1174 aa9.04□□□□□ -0.96
HDA1YNL021W TAT2P38967 592 aa9.04□□□□□ -0.96
HDA1YNL021W TFG1P41895 735 aaPredicted RBP9.04□□□□□ -0.96
HDA1YNL021W YNL115CP53925 644 aa9.04□□□□□ -0.96
HDA1YNL021W TSC11P40061 1430 aa9.04□□□□□ -0.96
HDA1YNL021W APL6P46682 809 aa9.04□□□□□ -0.96
HDA1YNL021W MTO1P53070 669 aa9.04□□□□□ -0.96
HDA1YNL021W VTH1P40438 1549 aa9.03□□□□□ -0.96
HDA1YNL021W VTH2P40890 1549 aa9.03□□□□□ -0.96
HDA1YNL021W MLP2P40457 1679 aa9.02□□□□□ -0.96
HDA1YNL021W FUR4P05316 633 aaKnown RBP9.02□□□□□ -0.96
HDA1YNL021W SSB1P11484 613 aaKnown RBP9.02□□□□□ -0.96
HDA1YNL021W MIP1P15801 1254 aa9.02□□□□□ -0.96
HDA1YNL021W DCW1P36091 449 aa9.02□□□□□ -0.96
HDA1YNL021W PBP2P38151 413 aaKnown RBP RIP-Chip data9.02□□□□□ -0.96not detected
HDA1YNL021W PMC1P38929 1173 aaPredicted RBP9.02□□□□□ -0.96
HDA1YNL021W SSB2P40150 613 aaKnown RBP9.02□□□□□ -0.96
HDA1YNL021W UBP3Q01477 912 aaKnown RBP RIP-Chip data9.02□□□□□ -0.96not detected
HDA1YNL021W ESC1Q03661 1658 aaKnown RBP9.02□□□□□ -0.97
HDA1YNL021W PUN1Q06991 263 aa9.02□□□□□ -0.97
HDA1YNL021W PHO4P07270 312 aaKnown RBP9.01□□□□□ -0.97
HDA1YNL021W RTF1P53064 558 aa9.01□□□□□ -0.97
HDA1YNL021W YPR084WQ06821 456 aa9.01□□□□□ -0.97
HDA1YNL021W HAP4P14064 554 aa9.01□□□□□ -0.97
HDA1YNL021W BOI1P38041 980 aaKnown RBP9.01□□□□□ -0.97
HDA1YNL021W GIN4Q12263 1142 aa9.01□□□□□ -0.97
HDA1YNL021W SUV3P32580 737 aa9□□□□□ -0.97
HDA1YNL021W BDF2Q07442 638 aa9□□□□□ -0.97
HDA1YNL021W ERF2Q06551 359 aa8.99□□□□□ -0.97
HDA1YNL021W FRA1Q07825 749 aa8.99□□□□□ -0.97
HDA1YNL021W TY1B-JR2P47100 1755 aaKnown RBP8.99□□□□□ -0.97
HDA1YNL021W TY1B-ER2Q03619 1755 aa8.99□□□□□ -0.97
HDA1YNL021W TY1B-MR1Q04214 1755 aa8.99□□□□□ -0.97
HDA1YNL021W TY1B-MR2Q04670 1755 aaKnown RBP8.99□□□□□ -0.97
HDA1YNL021W TY1B-LR1Q12088 1755 aaKnown RBP8.99□□□□□ -0.97
HDA1YNL021W TY1B-NL1Q12112 1755 aa8.99□□□□□ -0.97
HDA1YNL021W TY1B-GR1Q12141 1755 aa8.99□□□□□ -0.97
HDA1YNL021W TY1B-BLQ12490 1755 aa8.99□□□□□ -0.97
HDA1YNL021W DAN4P47179 1161 aa8.99□□□□□ -0.97
HDA1YNL021W PUS6P53294 404 aa8.99□□□□□ -0.97
HDA1YNL021W YOL036WQ08206 761 aa8.99□□□□□ -0.97
HDA1YNL021W TRM732Q03496 1420 aa8.99□□□□□ -0.97
HDA1YNL021W YOL057WQ08225 711 aa8.98□□□□□ -0.97
HDA1YNL021W LSO1Q3E827 93 aa8.98□□□□□ -0.97
HDA1YNL021W RPT1P33299 467 aaKnown RBP8.98□□□□□ -0.97
HDA1YNL021W DAK2P43550 591 aa8.98□□□□□ -0.97
HDA1YNL021W PDR15Q04182 1529 aaKnown RBP8.97□□□□□ -0.97
HDA1YNL021W SNT2P53127 1403 aa8.97□□□□□ -0.97
HDA1YNL021W STI1P15705 589 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
HDA1YNL021W TPM2P40414 161 aa8.97□□□□□ -0.97
HDA1YNL021W YJR142WP47173 342 aa8.97□□□□□ -0.97
HDA1YNL021W RPA190P10964 1664 aaKnown RBP8.97□□□□□ -0.97
HDA1YNL021W YJL049WP47048 450 aa8.96□□□□□ -0.97
HDA1YNL021W TUB4P53378 473 aa8.96□□□□□ -0.97
HDA1YNL021W POB3Q04636 552 aaKnown RBP8.96□□□□□ -0.97
HDA1YNL021W ULS1Q08562 1619 aa8.96□□□□□ -0.98
HDA1YNL021W DNF1P32660 1571 aa8.96□□□□□ -0.98
HDA1YNL021W GAS4Q08271 471 aa8.95□□□□□ -0.98
HDA1YNL021W PPM2Q08282 695 aa8.95□□□□□ -0.98
HDA1YNL021W TSC13Q99190 310 aa8.95□□□□□ -0.98
HDA1YNL021W MAD1P40957 749 aa8.95□□□□□ -0.98
HDA1YNL021W CDC53Q12018 815 aaKnown RBP8.95□□□□□ -0.98
HDA1YNL021W TRS120Q04183 1289 aa8.94□□□□□ -0.98
HDA1YNL021W SOH1P38633 127 aa8.93□□□□□ -0.98
HDA1YNL021W ZDS1P50111 915 aaKnown RBP8.93□□□□□ -0.98
HDA1YNL021W KEX2P13134 814 aa8.93□□□□□ -0.98
HDA1YNL021W ENP1P38333 483 aaKnown RBP8.93□□□□□ -0.98
HDA1YNL021W MNN1P39106 762 aa8.93□□□□□ -0.98
HDA1YNL021W GEA1P47102 1408 aaPredicted RBP8.92□□□□□ -0.98
HDA1YNL021W PDI1P17967 522 aaKnown RBP8.92□□□□□ -0.98
HDA1YNL021W FIG4P42837 879 aa8.92□□□□□ -0.98
HDA1YNL021W TOS4Q06266 489 aa8.92□□□□□ -0.98
HDA1YNL021W WRS1Q12109 432 aaKnown RBP8.92□□□□□ -0.98
HDA1YNL021W RPP1BP10622 106 aaKnown RBP8.91□□□□□ -0.98
HDA1YNL021W UBP12P39538 1254 aa8.91□□□□□ -0.98
HDA1YNL021W RPS26AP39938 119 aaKnown RBP8.91□□□□□ -0.98
HDA1YNL021W RPS26BP39939 119 aaKnown RBP8.91□□□□□ -0.98
HDA1YNL021W UTP13Q05946 817 aaKnown RBP8.91□□□□□ -0.98
HDA1YNL021W RMD1Q03441 430 aa8.9□□□□□ -0.98
HDA1YNL021W IKI3Q06706 1349 aaKnown RBP8.9□□□□□ -0.98
HDA1YNL021W RPO21P04050 1733 aaKnown RBP8.9□□□□□ -0.98
HDA1YNL021W RTT106P40161 455 aa8.9□□□□□ -0.99
HDA1YNL021W PEX21P50091 288 aa8.9□□□□□ -0.99
HDA1YNL021W ESF1Q06344 628 aaKnown RBP8.9□□□□□ -0.99
HDA1YNL021W YRR1Q12172 810 aa8.9□□□□□ -0.99
HDA1YNL021W NTE1Q04958 1679 aa8.9□□□□□ -0.99
HDA1YNL021W HTA1P04911 132 aaKnown RBP8.89□□□□□ -0.99
HDA1YNL021W HTA2P04912 132 aa8.89□□□□□ -0.99
HDA1YNL021W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
HDA1YNL021W HAL5P38970 855 aaKnown RBP8.89□□□□□ -0.99
HDA1YNL021W STE20Q03497 939 aaKnown RBP8.89□□□□□ -0.99
HDA1YNL021W AGE1Q04412 482 aa8.89□□□□□ -0.99
HDA1YNL021W YDL206WQ12424 762 aa8.89□□□□□ -0.99
HDA1YNL021W KTR2P33550 425 aa8.89□□□□□ -0.99
HDA1YNL021W HUL5P53119 910 aa8.89□□□□□ -0.99
HDA1YNL021W CLN2P20438 545 aa8.88□□□□□ -0.99
HDA1YNL021W BUD31P25337 157 aaPredicted RBP8.88□□□□□ -0.99
HDA1YNL021W MDG1P53885 366 aa8.88□□□□□ -0.99
HDA1YNL021W TEC1P18412 486 aa8.87□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms