RNA–Protein interactions for RNA: YMR236W

TAF9, Transcript of Subunit (17 kDa) of TFIID and SAGA complexes, yeastyeast

Gene TAF9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF9YMR236W YLR271WQ06152 274 aa8.34□□□□□ -1.07
TAF9YMR236W TOP1P04786 769 aa8.33□□□□□ -1.08
TAF9YMR236W RPP0P05317 312 aaKnown RBP8.32□□□□□ -1.08
TAF9YMR236W ICL1P28240 557 aaPredicted RBP8.32□□□□□ -1.08
TAF9YMR236W TPD3P31383 635 aa8.32□□□□□ -1.08
TAF9YMR236W HEF3P53978 1044 aaKnown RBP8.32□□□□□ -1.08
TAF9YMR236W UBP16Q02863 499 aa8.32□□□□□ -1.08
TAF9YMR236W PKH1Q03407 766 aa8.32□□□□□ -1.08
TAF9YMR236W SAS4Q04003 481 aa8.32□□□□□ -1.08
TAF9YMR236W RPN1P38764 993 aaKnown RBP8.31□□□□□ -1.08
TAF9YMR236W CST6P40535 587 aa8.31□□□□□ -1.08
TAF9YMR236W ATG20Q07528 640 aa8.31□□□□□ -1.08
TAF9YMR236W FRD1P32614 470 aaKnown RBP8.3□□□□□ -1.08
TAF9YMR236W SLI15P38283 698 aa8.3□□□□□ -1.08
TAF9YMR236W YJR008WP47085 338 aa8.3□□□□□ -1.08
TAF9YMR236W SRT1Q03175 343 aa8.3□□□□□ -1.08
TAF9YMR236W CAF20P12962 161 aaKnown RBP8.29□□□□□ -1.08
TAF9YMR236W SSA4P22202 642 aaKnown RBP8.29□□□□□ -1.08
TAF9YMR236W YDR306CQ06640 478 aa8.29□□□□□ -1.08
TAF9YMR236W PMD1P32634 1753 aa8.29□□□□□ -1.08
TAF9YMR236W SWI1P09547 1314 aa8.29□□□□□ -1.08
TAF9YMR236W MRP7P12687 371 aa8.28□□□□□ -1.08
TAF9YMR236W RET1P22276 1149 aaKnown RBP8.28□□□□□ -1.08
TAF9YMR236W NUP133P36161 1157 aa8.27□□□□□ -1.09
TAF9YMR236W VPS27P40343 622 aaKnown RBP8.27□□□□□ -1.09
TAF9YMR236W PUS5Q06244 254 aa8.27□□□□□ -1.09
TAF9YMR236W MSM1P22438 575 aa8.26□□□□□ -1.09
TAF9YMR236W RTG2P32608 588 aaKnown RBP8.26□□□□□ -1.09
TAF9YMR236W SET1P38827 1080 aaKnown RBP8.26□□□□□ -1.09
TAF9YMR236W TIF4632P39936 914 aaKnown RBP8.26□□□□□ -1.09
TAF9YMR236W DPH6Q12429 685 aa8.26□□□□□ -1.09
TAF9YMR236W SUP35P05453 685 aaKnown RBP8.25□□□□□ -1.09
TAF9YMR236W UBX2Q04228 584 aa8.25□□□□□ -1.09
TAF9YMR236W DPL1Q05567 589 aa8.25□□□□□ -1.09
TAF9YMR236W MAK21Q12176 1025 aaKnown RBP8.25□□□□□ -1.09
TAF9YMR236W SAC3P46674 1301 aa8.25□□□□□ -1.09
TAF9YMR236W THS1P04801 734 aaKnown RBP8.24□□□□□ -1.09
TAF9YMR236W RRD1P40454 393 aaKnown RBP8.24□□□□□ -1.09
TAF9YMR236W NOP8Q08287 484 aaPredicted RBP8.24□□□□□ -1.09
TAF9YMR236W SUI2P20459 304 aaKnown RBP8.23□□□□□ -1.09
TAF9YMR236W ITC1P53125 1264 aa8.23□□□□□ -1.09
TAF9YMR236W FCP1Q03254 732 aa8.23□□□□□ -1.09
TAF9YMR236W MTC5Q03897 1148 aa8.23□□□□□ -1.09
TAF9YMR236W CDC45Q08032 650 aa8.23□□□□□ -1.09
TAF9YMR236W YLR278CQ05854 1341 aa8.23□□□□□ -1.09
TAF9YMR236W NSR1P27476 414 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09 RIP-Chip
TAF9YMR236W YRB30P53107 440 aaPredicted RBP8.22□□□□□ -1.09
TAF9YMR236W PSH1Q12161 406 aa8.22□□□□□ -1.09
TAF9YMR236W KRE2P27809 442 aa8.21□□□□□ -1.1
TAF9YMR236W GLC3P32775 704 aa8.21□□□□□ -1.1
TAF9YMR236W ICP55P40051 511 aa8.21□□□□□ -1.1
TAF9YMR236W TIM50Q02776 476 aa8.21□□□□□ -1.1
TAF9YMR236W YPP1P46951 817 aa8.2□□□□□ -1.1
TAF9YMR236W CRF1Q04930 467 aa8.2□□□□□ -1.1
TAF9YMR236W HKR1P41809 1802 aa8.19□□□□□ -1.1
TAF9YMR236W TRP5P00931 707 aaKnown RBP8.19□□□□□ -1.1
TAF9YMR236W UBP12P39538 1254 aa8.19□□□□□ -1.1
TAF9YMR236W FET4P40988 552 aa8.19□□□□□ -1.1
TAF9YMR236W RRG1Q12167 365 aaPredicted RBP8.19□□□□□ -1.1
TAF9YMR236W AIM7Q12156 149 aa8.18□□□□□ -1.1
TAF9YMR236W FAS2P19097 1887 aaKnown RBP8.17□□□□□ -1.1
TAF9YMR236W MGM1P32266 881 aa8.17□□□□□ -1.1
TAF9YMR236W RAD24P32641 659 aa8.17□□□□□ -1.1
TAF9YMR236W NGR1P32831 672 aaKnown RBP8.17□□□□□ -1.1
TAF9YMR236W YGL015CP33199 130 aa8.17□□□□□ -1.1
TAF9YMR236W VHR2P40041 505 aa8.17□□□□□ -1.1
TAF9YMR236W YGR122WP53272 402 aa8.17□□□□□ -1.1
TAF9YMR236W SRC1Q03707 834 aa8.17□□□□□ -1.1
TAF9YMR236W PSF3Q12146 194 aa8.17□□□□□ -1.1
TAF9YMR236W SNU66Q12420 587 aaPredicted RBP8.17□□□□□ -1.1
TAF9YMR236W BOI2P39969 1040 aa8.16□□□□□ -1.1
TAF9YMR236W NUG1P40010 520 aaKnown RBP8.16□□□□□ -1.1
TAF9YMR236W SET4P42948 560 aa8.16□□□□□ -1.1
TAF9YMR236W YGR117CP53270 476 aa8.16□□□□□ -1.1
TAF9YMR236W RPT4P53549 437 aaKnown RBP8.16□□□□□ -1.1
TAF9YMR236W TRM44Q02648 567 aaKnown RBP8.16□□□□□ -1.1
TAF9YMR236W THI3Q07471 609 aa8.16□□□□□ -1.1
TAF9YMR236W FIG2P25653 1609 aa8.15□□□□□ -1.1
TAF9YMR236W RPS19AP07280 144 aaKnown RBP8.15□□□□□ -1.1
TAF9YMR236W RPS19BP07281 144 aaPredicted RBP8.15□□□□□ -1.1
TAF9YMR236W SWC3P31376 625 aa8.15□□□□□ -1.1
TAF9YMR236W AFG2P32794 780 aa8.15□□□□□ -1.1
TAF9YMR236W SPL2P38839 148 aa8.15□□□□□ -1.1
TAF9YMR236W EMP47P43555 445 aa8.15□□□□□ -1.1
TAF9YMR236W PRP42Q03776 544 aaKnown RBP8.15□□□□□ -1.1
TAF9YMR236W RVB2Q12464 471 aaKnown RBP8.15□□□□□ -1.1
TAF9YMR236W PEA2P40091 420 aa8.14□□□□□ -1.11
TAF9YMR236W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
TAF9YMR236W CSI1Q04368 295 aa8.14□□□□□ -1.11
TAF9YMR236W RPL17AP05740 184 aaKnown RBP8.13□□□□□ -1.11
TAF9YMR236W GAP1P19145 602 aaPredicted RBP8.13□□□□□ -1.11
TAF9YMR236W RPL17BP46990 184 aaKnown RBP8.13□□□□□ -1.11
TAF9YMR236W SEN54Q02825 467 aaPredicted RBP8.13□□□□□ -1.11
TAF9YMR236W GAS5Q08193 484 aa8.13□□□□□ -1.11
TAF9YMR236W TYW1Q08960 810 aaKnown RBP8.13□□□□□ -1.11
TAF9YMR236W ADR1P07248 1323 aa8.12□□□□□ -1.11
TAF9YMR236W HPR1P17629 752 aaKnown RBP8.12□□□□□ -1.11
TAF9YMR236W YIL089WP40500 205 aa8.12□□□□□ -1.11
TAF9YMR236W VPS4P52917 437 aa8.12□□□□□ -1.11
TAF9YMR236W CWC15Q03772 175 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms