RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W DIT1P21623 536 aa7.38□□□□□ -1.23
UBP8YMR223W CEM1P39525 442 aa7.38□□□□□ -1.23
UBP8YMR223W PHM7Q12252 991 aa7.38□□□□□ -1.23
UBP8YMR223W TY1A-DR3Q12441 440 aa7.36□□□□□ -1.23
UBP8YMR223W YDR461C-AQ2V2P7 80 aa7.36□□□□□ -1.23
UBP8YMR223W UTP7P40055 554 aaKnown RBP7.35□□□□□ -1.23
UBP8YMR223W YJL007CP47080 104 aa7.35□□□□□ -1.23
UBP8YMR223W YMR265CQ03508 461 aaKnown RBP7.35□□□□□ -1.23
UBP8YMR223W PUS1Q12211 544 aaKnown RBP7.35□□□□□ -1.23
UBP8YMR223W ALA1P40825 983 aaKnown RBP7.35□□□□□ -1.23
UBP8YMR223W SYT1Q06836 1226 aa7.35□□□□□ -1.23
UBP8YMR223W JJJ2P46997 583 aa7.34□□□□□ -1.23
UBP8YMR223W AI1P03875 834 aa7.33□□□□□ -1.24
UBP8YMR223W YFL034WP43564 1073 aa7.33□□□□□ -1.24
UBP8YMR223W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
UBP8YMR223W RDS2P19541 446 aaKnown RBP7.32□□□□□ -1.24
UBP8YMR223W IRE1P32361 1115 aa7.32□□□□□ -1.24
UBP8YMR223W KRE33P53914 1056 aaKnown RBP7.32□□□□□ -1.24
UBP8YMR223W MRX10Q05648 414 aa7.31□□□□□ -1.24
UBP8YMR223W ADE12P80210 433 aaKnown RBP7.3□□□□□ -1.24
UBP8YMR223W SWI5P08153 709 aa7.29□□□□□ -1.24
UBP8YMR223W BIM1P40013 344 aa7.29□□□□□ -1.24
UBP8YMR223W AIM9P40053 627 aaKnown RBP7.29□□□□□ -1.24
UBP8YMR223W YPQ2Q06328 317 aa7.28□□□□□ -1.24
UBP8YMR223W NSG2P53898 299 aa7.27□□□□□ -1.24
UBP8YMR223W TIF1P10081 395 aaKnown RBP7.27□□□□□ -1.25
UBP8YMR223W MCM1P11746 286 aa7.27□□□□□ -1.25
UBP8YMR223W MDJ1P35191 511 aa7.27□□□□□ -1.25
UBP8YMR223W SHM1P37292 490 aaPredicted RBP7.27□□□□□ -1.25
UBP8YMR223W LEO1P38439 464 aa7.27□□□□□ -1.25
UBP8YMR223W RPL34BP40525 121 aaKnown RBP7.27□□□□□ -1.25
UBP8YMR223W YFL066CP43538 392 aa7.27□□□□□ -1.25
UBP8YMR223W ATG32P40458 529 aa7.26□□□□□ -1.25
UBP8YMR223W THI72Q08579 599 aa7.26□□□□□ -1.25
UBP8YMR223W ENO1P00924 437 aaKnown RBP7.25□□□□□ -1.25
UBP8YMR223W RTG2P32608 588 aaKnown RBP7.25□□□□□ -1.25
UBP8YMR223W RPS6AP0CX37 236 aaKnown RBP7.24□□□□□ -1.25
UBP8YMR223W RPS6BP0CX38 236 aaPredicted RBP7.24□□□□□ -1.25
UBP8YMR223W PDC6P26263 563 aaKnown RBP7.24□□□□□ -1.25
UBP8YMR223W PSH1Q12161 406 aa7.24□□□□□ -1.25
UBP8YMR223W TSC13Q99190 310 aa7.24□□□□□ -1.25
UBP8YMR223W FPS1P23900 669 aa7.23□□□□□ -1.25
UBP8YMR223W PEP12P32854 288 aa7.23□□□□□ -1.25
UBP8YMR223W RPP1AP05318 106 aaPredicted RBP7.22□□□□□ -1.25
UBP8YMR223W NTH2P35172 780 aa7.22□□□□□ -1.25
UBP8YMR223W MRPL16P38064 232 aa7.22□□□□□ -1.25
UBP8YMR223W LSB3P43603 459 aaKnown RBP7.22□□□□□ -1.25
UBP8YMR223W RPS31P05759 152 aaKnown RBP7.21□□□□□ -1.25
UBP8YMR223W LEU1P07264 779 aaKnown RBP7.2□□□□□ -1.26
UBP8YMR223W SIS2P36024 562 aa7.2□□□□□ -1.26
UBP8YMR223W GPM1P00950 247 aaKnown RBP7.18□□□□□ -1.26
UBP8YMR223W PDI1P17967 522 aaKnown RBP7.18□□□□□ -1.26
UBP8YMR223W SPR3P41901 512 aa7.18□□□□□ -1.26
UBP8YMR223W YTA6P40328 754 aa7.18□□□□□ -1.26
UBP8YMR223W STB3Q12427 513 aa7.18□□□□□ -1.26
UBP8YMR223W YPR053CQ6Q5F3 151 aa7.18□□□□□ -1.26
UBP8YMR223W CYT1P07143 309 aa7.15□□□□□ -1.27
UBP8YMR223W HAP4P14064 554 aa7.15□□□□□ -1.27
UBP8YMR223W PHO87P25360 923 aa7.15□□□□□ -1.27
UBP8YMR223W KNS1P32350 737 aaPredicted RBP7.14□□□□□ -1.27
UBP8YMR223W MCX1P38323 520 aaPredicted RBP7.14□□□□□ -1.27
UBP8YMR223W CCT8P47079 568 aaKnown RBP7.14□□□□□ -1.27
UBP8YMR223W ALD2P47771 506 aa7.14□□□□□ -1.27
UBP8YMR223W RGP1P16664 663 aa7.13□□□□□ -1.27
UBP8YMR223W UBP1P25037 809 aa7.13□□□□□ -1.27
UBP8YMR223W MET1P36150 593 aa7.13□□□□□ -1.27
UBP8YMR223W SKN7P38889 622 aa7.13□□□□□ -1.27
UBP8YMR223W SBE2P42223 864 aaKnown RBP7.13□□□□□ -1.27
UBP8YMR223W YNL165WP53891 406 aa7.13□□□□□ -1.27
UBP8YMR223W TDA6Q06466 467 aa7.13□□□□□ -1.27
UBP8YMR223W UTP4Q06679 776 aaKnown RBP7.13□□□□□ -1.27
UBP8YMR223W GAS4Q08271 471 aa7.13□□□□□ -1.27
UBP8YMR223W YNR014WP53719 212 aa7.12□□□□□ -1.27
UBP8YMR223W TY1A-DR2Q03964 440 aaKnown RBP7.12□□□□□ -1.27
UBP8YMR223W PDC5P16467 563 aaKnown RBP7.11□□□□□ -1.27
UBP8YMR223W ACS2P52910 683 aaKnown RBP7.11□□□□□ -1.27
UBP8YMR223W YMR187CQ03236 431 aa7.11□□□□□ -1.27
UBP8YMR223W Q0182Q9ZZW1 134 aa7.11□□□□□ -1.27
UBP8YMR223W MLF3P32047 452 aa7.1□□□□□ -1.27
UBP8YMR223W BOI2P39969 1040 aa7.1□□□□□ -1.27
UBP8YMR223W SCD5P34758 872 aa7.09□□□□□ -1.28
UBP8YMR223W HEH2Q03281 663 aa7.09□□□□□ -1.28
UBP8YMR223W MSC7P38694 644 aa7.08□□□□□ -1.28
UBP8YMR223W GAL2P13181 574 aa7.07□□□□□ -1.28
UBP8YMR223W NGR1P32831 672 aaKnown RBP7.07□□□□□ -1.28
UBP8YMR223W KTR7P40504 517 aa7.07□□□□□ -1.28
UBP8YMR223W SKP1P52286 194 aa7.06□□□□□ -1.28
UBP8YMR223W HXT5P38695 592 aa7.03□□□□□ -1.28
UBP8YMR223W ROM1P53046 1155 aa7.03□□□□□ -1.28
UBP8YMR223W MTO1P53070 669 aa7.03□□□□□ -1.28
UBP8YMR223W VAN1P23642 535 aa7.02□□□□□ -1.29
UBP8YMR223W KAP122P32767 1081 aa7.02□□□□□ -1.29
UBP8YMR223W NCL1P38205 684 aaKnown RBP7.02□□□□□ -1.29
UBP8YMR223W YCK2P23292 546 aaKnown RBP7.01□□□□□ -1.29
UBP8YMR223W YDR215CQ12240 137 aa7.01□□□□□ -1.29
UBP8YMR223W TTI1P36097 1038 aa7.01□□□□□ -1.29
UBP8YMR223W TGL4P36165 910 aa7.01□□□□□ -1.29
UBP8YMR223W CWH41P53008 833 aa7.01□□□□□ -1.29
UBP8YMR223W TRS33Q99394 268 aa7□□□□□ -1.29
UBP8YMR223W RPC31P17890 251 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms