RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C UTP7P40055 554 aaKnown RBP7.01□□□□□ -1.29
SUB1YMR039C TY1A-MR1Q04215 440 aa7.01□□□□□ -1.29
SUB1YMR039C TSC13Q99190 310 aa7.01□□□□□ -1.29
SUB1YMR039C SWI5P08153 709 aa7□□□□□ -1.29
SUB1YMR039C ROG3P43602 733 aa7□□□□□ -1.29
SUB1YMR039C SLA1P32790 1244 aa6.99□□□□□ -1.29
SUB1YMR039C TTI1P36097 1038 aa6.99□□□□□ -1.29
SUB1YMR039C RPS6AP0CX37 236 aaKnown RBP6.97□□□□□ -1.29
SUB1YMR039C RPS6BP0CX38 236 aaPredicted RBP6.97□□□□□ -1.29
SUB1YMR039C PDI1P17967 522 aaKnown RBP6.97□□□□□ -1.29
SUB1YMR039C PHO87P25360 923 aa6.97□□□□□ -1.29
SUB1YMR039C AHP1P38013 176 aaKnown RBP6.97□□□□□ -1.29
SUB1YMR039C UBP15P50101 1230 aa6.97□□□□□ -1.29
SUB1YMR039C YPQ2Q06328 317 aa6.97□□□□□ -1.29
SUB1YMR039C CCP1P00431 361 aa6.96□□□□□ -1.3
SUB1YMR039C NTH2P35172 780 aa6.96□□□□□ -1.3
SUB1YMR039C KTR7P40504 517 aa6.96□□□□□ -1.3
SUB1YMR039C NAM8Q00539 523 aaKnown RBP6.96□□□□□ -1.3
SUB1YMR039C HAP4P14064 554 aa6.95□□□□□ -1.3
SUB1YMR039C ALA1P40825 983 aaKnown RBP6.95□□□□□ -1.3
SUB1YMR039C ACS2P52910 683 aaKnown RBP6.95□□□□□ -1.3
SUB1YMR039C TY1A-DR3Q12441 440 aa6.95□□□□□ -1.3
SUB1YMR039C MCM1P11746 286 aa6.94□□□□□ -1.3
SUB1YMR039C GAL2P13181 574 aa6.94□□□□□ -1.3
SUB1YMR039C TGL4P36165 910 aa6.94□□□□□ -1.3
SUB1YMR039C JJJ2P46997 583 aa6.94□□□□□ -1.3
SUB1YMR039C GAS4Q08271 471 aa6.94□□□□□ -1.3
SUB1YMR039C CYT1P07143 309 aa6.92□□□□□ -1.3
SUB1YMR039C YGR035CP53222 116 aa6.92□□□□□ -1.3
SUB1YMR039C HPF1Q05164 967 aa6.92□□□□□ -1.3
SUB1YMR039C UBP1P25037 809 aa6.91□□□□□ -1.3
SUB1YMR039C IRE1P32361 1115 aa6.91□□□□□ -1.3
SUB1YMR039C SHM1P37292 490 aaPredicted RBP6.91□□□□□ -1.3
SUB1YMR039C CPS1P27614 576 aa6.9□□□□□ -1.3
SUB1YMR039C LYS5P50113 272 aa6.89□□□□□ -1.31
SUB1YMR039C ROM1P53046 1155 aa6.89□□□□□ -1.31
SUB1YMR039C CUZ1P53899 274 aa6.89□□□□□ -1.31
SUB1YMR039C RLF2Q12495 606 aa6.89□□□□□ -1.31
SUB1YMR039C DPH6Q12429 685 aa6.88□□□□□ -1.31
SUB1YMR039C RPS31P05759 152 aaKnown RBP6.87□□□□□ -1.31
SUB1YMR039C DIT1P21623 536 aa6.87□□□□□ -1.31
SUB1YMR039C PUP1P25043 261 aa6.87□□□□□ -1.31
SUB1YMR039C PDC6P26263 563 aaKnown RBP6.87□□□□□ -1.31
SUB1YMR039C ECM23Q02710 187 aa6.87□□□□□ -1.31
SUB1YMR039C PSH1Q12161 406 aa6.87□□□□□ -1.31
SUB1YMR039C SSA4P22202 642 aaKnown RBP6.86□□□□□ -1.31
SUB1YMR039C TRK2P28584 889 aa6.86□□□□□ -1.31
SUB1YMR039C JJJ3P47138 172 aa6.86□□□□□ -1.31
SUB1YMR039C YMR265CQ03508 461 aaKnown RBP6.85□□□□□ -1.31
SUB1YMR039C VAN1P23642 535 aa6.84□□□□□ -1.31
SUB1YMR039C NGR1P32831 672 aaKnown RBP6.84□□□□□ -1.31
SUB1YMR039C CEM1P39525 442 aa6.84□□□□□ -1.31
SUB1YMR039C YNL165WP53891 406 aa6.84□□□□□ -1.31
SUB1YMR039C YDR461C-AQ2V2P7 80 aa6.83□□□□□ -1.32
SUB1YMR039C LEU1P07264 779 aaKnown RBP6.82□□□□□ -1.32
SUB1YMR039C UBX7P38349 436 aa6.82□□□□□ -1.32
SUB1YMR039C YTA6P40328 754 aa6.82□□□□□ -1.32
SUB1YMR039C UTP4Q06679 776 aaKnown RBP6.82□□□□□ -1.32
SUB1YMR039C SYT1Q06836 1226 aa6.82□□□□□ -1.32
SUB1YMR039C TRS33Q99394 268 aa6.82□□□□□ -1.32
SUB1YMR039C SCD5P34758 872 aa6.81□□□□□ -1.32
SUB1YMR039C KRE33P53914 1056 aaKnown RBP6.81□□□□□ -1.32
SUB1YMR039C Q0182Q9ZZW1 134 aa6.81□□□□□ -1.32
SUB1YMR039C MLF3P32047 452 aa6.8□□□□□ -1.32
SUB1YMR039C HXT5P38695 592 aa6.8□□□□□ -1.32
SUB1YMR039C ALD2P47771 506 aa6.8□□□□□ -1.32
SUB1YMR039C MRPL16P38064 232 aa6.79□□□□□ -1.32
SUB1YMR039C CWH41P53008 833 aa6.79□□□□□ -1.32
SUB1YMR039C ADE12P80210 433 aaKnown RBP6.79□□□□□ -1.32
SUB1YMR039C NOB1Q08444 459 aaKnown RBP6.79□□□□□ -1.32
SUB1YMR039C PUF6Q04373 656 aaKnown RBP6.78□□□□□ -1.32
SUB1YMR039C RPP1AP05318 106 aaPredicted RBP6.77□□□□□ -1.33
SUB1YMR039C SUV3P32580 737 aa6.77□□□□□ -1.33
SUB1YMR039C SPR3P41901 512 aa6.77□□□□□ -1.33
SUB1YMR039C STB3Q12427 513 aa6.77□□□□□ -1.33
SUB1YMR039C RGP1P16664 663 aa6.76□□□□□ -1.33
SUB1YMR039C FPS1P23900 669 aa6.76□□□□□ -1.33
SUB1YMR039C YML083CQ04526 418 aa6.76□□□□□ -1.33
SUB1YMR039C SUB2Q07478 446 aaKnown RBP6.76□□□□□ -1.33
SUB1YMR039C CAB1Q04430 367 aa6.75□□□□□ -1.33
SUB1YMR039C MTC5Q03897 1148 aa6.74□□□□□ -1.33
SUB1YMR039C KAP122P32767 1081 aa6.72□□□□□ -1.33
SUB1YMR039C ALD4P46367 519 aaKnown RBP6.72□□□□□ -1.33
SUB1YMR039C SKP1P52286 194 aa6.72□□□□□ -1.33
SUB1YMR039C MTO1P53070 669 aa6.72□□□□□ -1.33
SUB1YMR039C CWC15Q03772 175 aaKnown RBP6.72□□□□□ -1.33
SUB1YMR039C SRS2P12954 1174 aa6.71□□□□□ -1.34
SUB1YMR039C YBR197CP38306 217 aa6.71□□□□□ -1.34
SUB1YMR039C PUN1Q06991 263 aa6.71□□□□□ -1.34
SUB1YMR039C MRPL33P20084 86 aa6.7□□□□□ -1.34
SUB1YMR039C TY1A-DR2Q03964 440 aaKnown RBP6.7□□□□□ -1.34
SUB1YMR039C GPM1P00950 247 aaKnown RBP6.69□□□□□ -1.34
SUB1YMR039C AI1P03875 834 aa6.69□□□□□ -1.34
SUB1YMR039C RPC31P17890 251 aa6.69□□□□□ -1.34
SUB1YMR039C MSC7P38694 644 aa6.69□□□□□ -1.34
SUB1YMR039C FOX2Q02207 900 aaKnown RBP6.69□□□□□ -1.34
SUB1YMR039C QDR2P40474 542 aa6.68□□□□□ -1.34
SUB1YMR039C CUS1Q02554 436 aaPredicted RBP6.68□□□□□ -1.34
SUB1YMR039C HEH2Q03281 663 aa6.68□□□□□ -1.34
SUB1YMR039C VMA3P25515 160 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms