RNA–Protein interactions for RNA: YLR187W

SKG3, Transcript of Protein of unknown function, yeast

Gene SKG3, Length 3,081 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG3	YLR187W	AIM44	Q99299	758 aa		5.72	□□□□□ -1.49
SKG3	YLR187W	RRT14	P40470	206 aa		5.71	□□□□□ -1.49
SKG3	YLR187W	AKL1	P38080	1108 aa	Known RBP	5.71	□□□□□ -1.5
SKG3	YLR187W	MAM3	Q12296	706 aa		5.71	□□□□□ -1.5
SKG3	YLR187W	RTG1	P32607	177 aa		5.71	□□□□□ -1.5
SKG3	YLR187W	IES2	P40154	320 aa		5.71	□□□□□ -1.5
SKG3	YLR187W	GYP7	P48365	746 aa		5.71	□□□□□ -1.5
SKG3	YLR187W	RAD50	P12753	1312 aa		5.7	□□□□□ -1.5
SKG3	YLR187W	NTH2	P35172	780 aa		5.7	□□□□□ -1.5
SKG3	YLR187W	SRT1	Q03175	343 aa		5.7	□□□□□ -1.5
SKG3	YLR187W	ECM16	Q04217	1267 aa	Known RBP	5.7	□□□□□ -1.5
SKG3	YLR187W	YPP1	P46951	817 aa		5.7	□□□□□ -1.5
SKG3	YLR187W	RPS19A	P07280	144 aa	Known RBP	5.69	□□□□□ -1.5
SKG3	YLR187W	RPS19B	P07281	144 aa	Predicted RBP	5.69	□□□□□ -1.5
SKG3	YLR187W	RPS24A	P0CX31	135 aa	Known RBP	5.69	□□□□□ -1.5
SKG3	YLR187W	RPS24B	P0CX32	135 aa	Known RBP	5.69	□□□□□ -1.5
SKG3	YLR187W	EAP1	P36041	632 aa	Known RBP	5.69	□□□□□ -1.5
SKG3	YLR187W	MAM1	P40065	302 aa		5.69	□□□□□ -1.5
SKG3	YLR187W	CDC16	P09798	840 aa		5.69	□□□□□ -1.5
SKG3	YLR187W	ROM2	P51862	1356 aa	Known RBP	5.69	□□□□□ -1.5
SKG3	YLR187W	GCR2	Q01722	534 aa		5.68	□□□□□ -1.5
SKG3	YLR187W	NKP2	Q06162	153 aa		5.68	□□□□□ -1.5
SKG3	YLR187W	SEC61	P32915	480 aa		5.68	□□□□□ -1.5
SKG3	YLR187W	ARL1	P38116	183 aa	Known RBP	5.68	□□□□□ -1.5
SKG3	YLR187W	KRE33	P53914	1056 aa	Known RBP	5.68	□□□□□ -1.5
SKG3	YLR187W	CSI1	Q04368	295 aa		5.68	□□□□□ -1.5
SKG3	YLR187W	NOP53	Q12080	455 aa	Known RBP	5.68	□□□□□ -1.5
SKG3	YLR187W	EDS1	P38073	919 aa		5.68	□□□□□ -1.5
SKG3	YLR187W	GAS4	Q08271	471 aa		5.68	□□□□□ -1.5
SKG3	YLR187W	DLD1	P32891	587 aa		5.67	□□□□□ -1.5
SKG3	YLR187W	REF2	P42073	533 aa	Predicted RBP	5.67	□□□□□ -1.5
SKG3	YLR187W	ITC1	P53125	1264 aa		5.67	□□□□□ -1.5
SKG3	YLR187W	LYS2	P07702	1392 aa		5.67	□□□□□ -1.5
SKG3	YLR187W	SRS2	P12954	1174 aa		5.67	□□□□□ -1.5
SKG3	YLR187W	GCD7	P32502	381 aa	Predicted RBP	5.67	□□□□□ -1.5
SKG3	YLR187W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
SKG3	YLR187W	BDH2	P39713	417 aa		5.66	□□□□□ -1.5
SKG3	YLR187W	PIL1	P53252	339 aa	Known RBP	5.66	□□□□□ -1.5
SKG3	YLR187W	NCR1	Q12200	1170 aa		5.66	□□□□□ -1.5
SKG3	YLR187W	ZDS1	P50111	915 aa	Known RBP	5.66	□□□□□ -1.5
SKG3	YLR187W	YNL035C	P53962	389 aa	Known RBP	5.66	□□□□□ -1.5
SKG3	YLR187W	CIR1	P42940	261 aa		5.66	□□□□□ -1.5
SKG3	YLR187W	DPS1	P04802	557 aa	Known RBP	5.65	□□□□□ -1.5
SKG3	YLR187W	BRN1	P38170	754 aa		5.65	□□□□□ -1.5
SKG3	YLR187W	COQ4	O13525	335 aa		5.64	□□□□□ -1.51
SKG3	YLR187W	TRL1	P09880	827 aa	Known RBP	5.64	□□□□□ -1.51
SKG3	YLR187W	YNG2	P38806	282 aa	Known RBP	5.64	□□□□□ -1.51
SKG3	YLR187W	CTR9	P89105	1077 aa		5.64	□□□□□ -1.51
SKG3	YLR187W	HYR1	P40581	163 aa	Known RBP	5.64	□□□□□ -1.51
SKG3	YLR187W	NPA3	P47122	385 aa		5.64	□□□□□ -1.51
SKG3	YLR187W	HPC2	Q01448	625 aa		5.64	□□□□□ -1.51
SKG3	YLR187W	YDR344C	Q05510	147 aa		5.64	□□□□□ -1.51
SKG3	YLR187W	COX6	P00427	148 aa		5.63	□□□□□ -1.51
SKG3	YLR187W	HXT13	P39924	564 aa		5.63	□□□□□ -1.51
SKG3	YLR187W	SPO1	P53541	631 aa		5.63	□□□□□ -1.51
SKG3	YLR187W	YDR306C	Q06640	478 aa		5.63	□□□□□ -1.51
SKG3	YLR187W	NOP8	Q08287	484 aa	Predicted RBP	5.63	□□□□□ -1.51
SKG3	YLR187W	RAD24	P32641	659 aa		5.62	□□□□□ -1.51
SKG3	YLR187W	HXT17	P53631	564 aa		5.62	□□□□□ -1.51
SKG3	YLR187W	CTF4	Q01454	927 aa		5.62	□□□□□ -1.51
SKG3	YLR187W	HRQ1	Q05549	1077 aa		5.62	□□□□□ -1.51
SKG3	YLR187W	HGH1	P48362	394 aa	Known RBP	5.62	□□□□□ -1.51
SKG3	YLR187W	BMS1	Q08965	1183 aa	Known RBP	5.62	□□□□□ -1.51
SKG3	YLR187W	RKM3	P38222	552 aa		5.61	□□□□□ -1.51
SKG3	YLR187W	YML020W	Q03722	664 aa		5.61	□□□□□ -1.51
SKG3	YLR187W	YMR074C	Q04773	145 aa		5.61	□□□□□ -1.51
SKG3	YLR187W	HST1	P53685	503 aa		5.61	□□□□□ -1.51
SKG3	YLR187W	TFB3	Q03290	321 aa		5.61	□□□□□ -1.51
SKG3	YLR187W	YOL057W	Q08225	711 aa		5.61	□□□□□ -1.51
SKG3	YLR187W	RFC1	P38630	861 aa	Known RBP	5.6	□□□□□ -1.51
SKG3	YLR187W	BOI2	P39969	1040 aa		5.6	□□□□□ -1.51
SKG3	YLR187W	LCD1	Q04377	747 aa		5.6	□□□□□ -1.51
SKG3	YLR187W	YGR122W	P53272	402 aa		5.59	□□□□□ -1.51
SKG3	YLR187W	YJR008W	P47085	338 aa		5.59	□□□□□ -1.51
SKG3	YLR187W	RSC1	P53236	928 aa		5.59	□□□□□ -1.51
SKG3	YLR187W	AOS1	Q06624	347 aa		5.59	□□□□□ -1.51
SKG3	YLR187W	RPN12	P32496	274 aa		5.59	□□□□□ -1.52
SKG3	YLR187W	NMD2	P38798	1089 aa	Known RBP	5.59	□□□□□ -1.52
SKG3	YLR187W	VPS20	Q04272	221 aa		5.59	□□□□□ -1.52
SKG3	YLR187W	UGA3	P26370	528 aa		5.58	□□□□□ -1.52
SKG3	YLR187W	MPE1	P35728	441 aa	Known RBP	5.58	□□□□□ -1.52
SKG3	YLR187W	YDR090C	Q03193	310 aa		5.58	□□□□□ -1.52
SKG3	YLR187W	RPS9B	P05755	195 aa	Known RBP	5.58	□□□□□ -1.52
SKG3	YLR187W	RNR2	P09938	399 aa	Known RBP	5.58	□□□□□ -1.52
SKG3	YLR187W	MBR1	P23493	339 aa		5.58	□□□□□ -1.52
SKG3	YLR187W	HSP104	P31539	908 aa	Known RBP	5.58	□□□□□ -1.52
SKG3	YLR187W	KEX1	P09620	729 aa		5.57	□□□□□ -1.52
SKG3	YLR187W	PKC1	P24583	1151 aa		5.57	□□□□□ -1.52
SKG3	YLR187W	YBR287W	P38355	427 aa		5.57	□□□□□ -1.52
SKG3	YLR187W	RVS167	P39743	482 aa	Known RBP	5.57	□□□□□ -1.52
SKG3	YLR187W	AIM9	P40053	627 aa	Known RBP	5.57	□□□□□ -1.52
SKG3	YLR187W	SUB2	Q07478	446 aa	Known RBP	5.57	□□□□□ -1.52
SKG3	YLR187W	ELM1	P32801	640 aa		5.56	□□□□□ -1.52
SKG3	YLR187W	MRP7	P12687	371 aa		5.56	□□□□□ -1.52
SKG3	YLR187W	ATF2	P53296	535 aa		5.56	□□□□□ -1.52
SKG3	YLR187W	PTC3	P34221	468 aa	Known RBP	5.56	□□□□□ -1.52
SKG3	YLR187W	COG8	Q04632	607 aa		5.56	□□□□□ -1.52
SKG3	YLR187W	SLM3	Q12093	417 aa		5.56	□□□□□ -1.52
SKG3	YLR187W	RSF2	P46974	1380 aa		5.56	□□□□□ -1.52
SKG3	YLR187W	KCC4	P25389	1037 aa		5.55	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms