RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	SYF1	Q04048	859 aa	Predicted RBP	12.39	□□□□□ -0.43
SAM1	YLR180W	DCD1	P06773	312 aa		12.38	□□□□□ -0.43
SAM1	YLR180W	UGA3	P26370	528 aa		12.38	□□□□□ -0.43
SAM1	YLR180W	MAC1	P35192	417 aa		12.38	□□□□□ -0.43
SAM1	YLR180W	TYW1	Q08960	810 aa	Known RBP	12.38	□□□□□ -0.43
SAM1	YLR180W	EMP47	P43555	445 aa		12.37	□□□□□ -0.43
SAM1	YLR180W	TRM44	Q02648	567 aa	Known RBP	12.37	□□□□□ -0.43
SAM1	YLR180W	CWC15	Q03772	175 aa	Known RBP	12.37	□□□□□ -0.43
SAM1	YLR180W	HAT1	Q12341	374 aa		12.37	□□□□□ -0.43
SAM1	YLR180W	TRK1	P12685	1235 aa		12.35	□□□□□ -0.43
SAM1	YLR180W	YGR117C	P53270	476 aa		12.35	□□□□□ -0.43
SAM1	YLR180W	APL2	P36000	726 aa	Predicted RBP	12.34	□□□□□ -0.43
SAM1	YLR180W	NSE3	Q05541	303 aa		12.34	□□□□□ -0.43
SAM1	YLR180W	SSK22	P25390	1331 aa	Predicted RBP	12.34	□□□□□ -0.43
SAM1	YLR180W	YPR204W	Q08995	1032 aa		12.33	□□□□□ -0.44
SAM1	YLR180W	TIF4632	P39936	914 aa	Known RBP	12.32	□□□□□ -0.44
SAM1	YLR180W	VPS4	P52917	437 aa		12.32	□□□□□ -0.44
SAM1	YLR180W	HPR1	P17629	752 aa	Known RBP	12.31	□□□□□ -0.44
SAM1	YLR180W	BSD2	P38356	321 aa		12.31	□□□□□ -0.44
SAM1	YLR180W	VPS64	Q03944	604 aa		12.29	□□□□□ -0.44
SAM1	YLR180W	HVG1	P0CE11	249 aa		12.28	□□□□□ -0.44
SAM1	YLR180W	SET4	P42948	560 aa		12.28	□□□□□ -0.44
SAM1	YLR180W	NCS6	P53088	359 aa		12.28	□□□□□ -0.44
SAM1	YLR180W	CRF1	Q04930	467 aa		12.28	□□□□□ -0.44
SAM1	YLR180W	PIB1	Q06651	286 aa		12.28	□□□□□ -0.44
SAM1	YLR180W	HKR1	P41809	1802 aa		12.27	□□□□□ -0.44
SAM1	YLR180W	AFG2	P32794	780 aa		12.27	□□□□□ -0.45
SAM1	YLR180W	STV1	P37296	890 aa		12.27	□□□□□ -0.45
SAM1	YLR180W	YNL050C	P53952	270 aa		12.27	□□□□□ -0.45
SAM1	YLR180W	IOC4	Q04213	475 aa		12.27	□□□□□ -0.45
SAM1	YLR180W	RRG1	Q12167	365 aa	Predicted RBP	12.26	□□□□□ -0.45
SAM1	YLR180W	CSR2	Q12734	1121 aa		12.25	□□□□□ -0.45
SAM1	YLR180W	LYS2	P07702	1392 aa		12.24	□□□□□ -0.45
SAM1	YLR180W	ZDS2	P54786	942 aa		12.23	□□□□□ -0.45
SAM1	YLR180W	CST9	Q06032	482 aa		12.23	□□□□□ -0.45
SAM1	YLR180W	GAS5	Q08193	484 aa		12.23	□□□□□ -0.45
SAM1	YLR180W	RRT6	P53117	311 aa	Predicted RBP	12.22	□□□□□ -0.45
SAM1	YLR180W	SEN54	Q02825	467 aa	Predicted RBP	12.22	□□□□□ -0.45
SAM1	YLR180W	PKH1	Q03407	766 aa		12.22	□□□□□ -0.45
SAM1	YLR180W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	12.21	□□□□□ -0.45	not detected
SAM1	YLR180W	PNT1	P38969	423 aa		12.21	□□□□□ -0.45
SAM1	YLR180W	RRP46	P53256	223 aa	Predicted RBP	12.21	□□□□□ -0.45
SAM1	YLR180W	KRE2	P27809	442 aa		12.2	□□□□□ -0.46
SAM1	YLR180W	PAM1	P37304	830 aa	Known RBP	12.2	□□□□□ -0.46
SAM1	YLR180W	TRP5	P00931	707 aa	Known RBP	12.19	□□□□□ -0.46
SAM1	YLR180W	YKR023W	P36119	530 aa	Known RBP	12.19	□□□□□ -0.46
SAM1	YLR180W	RSC30	P38781	883 aa		12.19	□□□□□ -0.46
SAM1	YLR180W	ZDS1	P50111	915 aa	Known RBP	12.19	□□□□□ -0.46
SAM1	YLR180W	UBX2	Q04228	584 aa		12.19	□□□□□ -0.46
SAM1	YLR180W	YLR271W	Q06152	274 aa		12.19	□□□□□ -0.46
SAM1	YLR180W	DPH6	Q12429	685 aa		12.19	□□□□□ -0.46
SAM1	YLR180W	PRS1	P32895	427 aa	Known RBP	12.18	□□□□□ -0.46
SAM1	YLR180W	MOT2	P34909	587 aa	Known RBP	12.17	□□□□□ -0.46
SAM1	YLR180W	APE3	P37302	537 aa	Known RBP	12.17	□□□□□ -0.46
SAM1	YLR180W	COQ4	O13525	335 aa		12.16	□□□□□ -0.46
SAM1	YLR180W	CBP1	P07252	654 aa		12.16	□□□□□ -0.46
SAM1	YLR180W	GSM1	P42950	618 aa		12.16	□□□□□ -0.46
SAM1	YLR180W	BMS1	Q08965	1183 aa	Known RBP	12.16	□□□□□ -0.46
SAM1	YLR180W	RPP0	P05317	312 aa	Known RBP	12.15	□□□□□ -0.46
SAM1	YLR180W	ICP55	P40051	511 aa		12.15	□□□□□ -0.46
SAM1	YLR180W	MAM1	P40065	302 aa		12.14	□□□□□ -0.47
SAM1	YLR180W	FCP1	Q03254	732 aa		12.14	□□□□□ -0.47
SAM1	YLR180W	YBR287W	P38355	427 aa		12.13	□□□□□ -0.47
SAM1	YLR180W	RPT4	P53549	437 aa	Known RBP	12.13	□□□□□ -0.47
SAM1	YLR180W	FLO11	P08640	1367 aa		12.12	□□□□□ -0.47
SAM1	YLR180W	RTR1	P40084	226 aa	Predicted RBP	12.11	□□□□□ -0.47
SAM1	YLR180W	PRP42	Q03776	544 aa	Known RBP	12.11	□□□□□ -0.47
SAM1	YLR180W	RBA50	Q04418	439 aa		12.11	□□□□□ -0.47
SAM1	YLR180W	PRD1	P25375	712 aa		12.1	□□□□□ -0.47
SAM1	YLR180W	SPL2	P38839	148 aa		12.1	□□□□□ -0.47
SAM1	YLR180W	DNM1	P54861	757 aa		12.1	□□□□□ -0.47
SAM1	YLR180W	YOL057W	Q08225	711 aa		12.1	□□□□□ -0.47
SAM1	YLR180W	MAL31	P38156	614 aa		12.07	□□□□□ -0.48
SAM1	YLR180W	MGM1	P32266	881 aa		12.06	□□□□□ -0.48
SAM1	YLR180W	VPS27	P40343	622 aa	Known RBP	12.06	□□□□□ -0.48
SAM1	YLR180W	CDC45	Q08032	650 aa		12.06	□□□□□ -0.48
SAM1	YLR180W	SWI1	P09547	1314 aa		12.06	□□□□□ -0.48
SAM1	YLR180W	GSC2	P40989	1895 aa		12.06	□□□□□ -0.48
SAM1	YLR180W	NGR1	P32831	672 aa	Known RBP	12.05	□□□□□ -0.48
SAM1	YLR180W	THI3	Q07471	609 aa		12.05	□□□□□ -0.48
SAM1	YLR180W	UTP7	P40055	554 aa	Known RBP	12.04	□□□□□ -0.48
SAM1	YLR180W	CST6	P40535	587 aa		12.04	□□□□□ -0.48
SAM1	YLR180W	JIP4	Q03361	876 aa		12.04	□□□□□ -0.48
SAM1	YLR180W	SGD1	Q06132	899 aa		12.04	□□□□□ -0.48
SAM1	YLR180W	GAL2	P13181	574 aa		12.03	□□□□□ -0.48
SAM1	YLR180W	RPS7A	P26786	190 aa	Known RBP	12.03	□□□□□ -0.48
SAM1	YLR180W	NIT1	P40447	199 aa		12.03	□□□□□ -0.48
SAM1	YLR180W	GYP7	P48365	746 aa		12.03	□□□□□ -0.48
SAM1	YLR180W	MTC3	P53077	123 aa		12.03	□□□□□ -0.48
SAM1	YLR180W	YDL144C	Q07589	356 aa		12.03	□□□□□ -0.48
SAM1	YLR180W	ASH1	P34233	588 aa		12.02	□□□□□ -0.49
SAM1	YLR180W	TOS4	Q06266	489 aa		12.02	□□□□□ -0.49
SAM1	YLR180W	SAC3	P46674	1301 aa		12.02	□□□□□ -0.49
SAM1	YLR180W	ARG82	P07250	355 aa		12.01	□□□□□ -0.49
SAM1	YLR180W	NUP133	P36161	1157 aa		12.01	□□□□□ -0.49
SAM1	YLR180W	YRB30	P53107	440 aa	Predicted RBP	12.01	□□□□□ -0.49
SAM1	YLR180W	ITC1	P53125	1264 aa		12.01	□□□□□ -0.49
SAM1	YLR180W	ACK1	Q07622	623 aa	Predicted RBP	12.01	□□□□□ -0.49
SAM1	YLR180W	VPS13	Q07878	3144 aa		12	□□□□□ -0.49
SAM1	YLR180W	YJR008W	P47085	338 aa		12	□□□□□ -0.49

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms