RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W SPR3P41901 512 aa5.72□□□□□ -1.49
SOF1YLL011W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SOF1YLL011W RGA1P39083 1007 aa5.71□□□□□ -1.49
SOF1YLL011W DAK2P43550 591 aa5.71□□□□□ -1.49
SOF1YLL011W SPP1Q03012 353 aa5.71□□□□□ -1.49
SOF1YLL011W RMD1Q03441 430 aa5.71□□□□□ -1.49
SOF1YLL011W BUD21Q08492 214 aaPredicted RBP5.71□□□□□ -1.49
SOF1YLL011W YOR131CQ12486 218 aa5.71□□□□□ -1.49
SOF1YLL011W SPT6P23615 1451 aaKnown RBP5.71□□□□□ -1.5
SOF1YLL011W HAL5P38970 855 aaKnown RBP5.71□□□□□ -1.5
SOF1YLL011W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SOF1YLL011W RPA14P50106 137 aa5.71□□□□□ -1.5
SOF1YLL011W MTO1P53070 669 aa5.71□□□□□ -1.5
SOF1YLL011W CWC24P53769 259 aa5.71□□□□□ -1.5
SOF1YLL011W BDF2Q07442 638 aa5.71□□□□□ -1.5
SOF1YLL011W MPC54Q08550 464 aa5.71□□□□□ -1.5
SOF1YLL011W HSL1P34244 1518 aa5.7□□□□□ -1.5
SOF1YLL011W GRX4P32642 244 aa5.7□□□□□ -1.5
SOF1YLL011W PTC4P38089 393 aa5.7□□□□□ -1.5
SOF1YLL011W AIM9P40053 627 aaKnown RBP5.7□□□□□ -1.5
SOF1YLL011W RTT106P40161 455 aa5.7□□□□□ -1.5
SOF1YLL011W MID1P41821 548 aa5.7□□□□□ -1.5
SOF1YLL011W AGE1Q04412 482 aa5.7□□□□□ -1.5
SOF1YLL011W YGR161W-CQ3E744 92 aa5.7□□□□□ -1.5
SOF1YLL011W MST1P07236 462 aa5.69□□□□□ -1.5
SOF1YLL011W RPB10P22139 70 aa5.69□□□□□ -1.5
SOF1YLL011W PET112P33893 541 aa5.69□□□□□ -1.5
SOF1YLL011W MNN1P39106 762 aa5.69□□□□□ -1.5
SOF1YLL011W YJR142WP47173 342 aa5.69□□□□□ -1.5
SOF1YLL011W ESF1Q06344 628 aaKnown RBP5.69□□□□□ -1.5
SOF1YLL011W ISU2Q12056 156 aa5.69□□□□□ -1.5
SOF1YLL011W WSC3Q12215 556 aa5.69□□□□□ -1.5
SOF1YLL011W MSB4Q12317 492 aa5.69□□□□□ -1.5
SOF1YLL011W SPA2P23201 1466 aaKnown RBP5.69□□□□□ -1.5
SOF1YLL011W PDR1P12383 1068 aa5.68□□□□□ -1.5
SOF1YLL011W GCD6P32501 712 aaKnown RBP5.68□□□□□ -1.5
SOF1YLL011W NPL4P33755 580 aa5.68□□□□□ -1.5
SOF1YLL011W YFL034WP43564 1073 aa5.68□□□□□ -1.5
SOF1YLL011W CWH41P53008 833 aa5.68□□□□□ -1.5
SOF1YLL011W ISR1Q06098 443 aaKnown RBP5.68□□□□□ -1.5
SOF1YLL011W YPR097WQ06839 1073 aa5.68□□□□□ -1.5
SOF1YLL011W YOL057WQ08225 711 aa5.68□□□□□ -1.5
SOF1YLL011W ALR1Q08269 859 aa5.68□□□□□ -1.5
SOF1YLL011W AIR2Q12476 344 aaKnown RBP5.68□□□□□ -1.5
SOF1YLL011W MET6P05694 767 aaKnown RBP5.67□□□□□ -1.5
SOF1YLL011W IXR1P33417 597 aa5.67□□□□□ -1.5
SOF1YLL011W NTH2P35172 780 aa5.67□□□□□ -1.5
SOF1YLL011W TPO2P53283 614 aa5.67□□□□□ -1.5
SOF1YLL011W FOX2Q02207 900 aaKnown RBP5.67□□□□□ -1.5
SOF1YLL011W ISC10P32645 267 aa5.66□□□□□ -1.5
SOF1YLL011W TPM2P40414 161 aa5.66□□□□□ -1.5
SOF1YLL011W HUL5P53119 910 aa5.66□□□□□ -1.5
SOF1YLL011W ECM5Q03214 1411 aa5.65□□□□□ -1.5
SOF1YLL011W CYT1P07143 309 aa5.65□□□□□ -1.5
SOF1YLL011W CYC8P14922 966 aa5.65□□□□□ -1.5
SOF1YLL011W RAM1P22007 431 aa5.65□□□□□ -1.5
SOF1YLL011W UBP1P25037 809 aa5.65□□□□□ -1.5
SOF1YLL011W YBR197CP38306 217 aa5.65□□□□□ -1.5
SOF1YLL011W STR2P47164 639 aa5.65□□□□□ -1.5
SOF1YLL011W ISM1P48526 1002 aa5.65□□□□□ -1.5
SOF1YLL011W YGR122WP53272 402 aa5.65□□□□□ -1.5
SOF1YLL011W UFD2P54860 961 aa5.65□□□□□ -1.5
SOF1YLL011W HDA3Q06623 655 aa5.65□□□□□ -1.5
SOF1YLL011W PDC1P06169 563 aaKnown RBP5.64□□□□□ -1.51
SOF1YLL011W GRX1P25373 110 aaKnown RBP5.64□□□□□ -1.51
SOF1YLL011W MNR2P35724 969 aa5.64□□□□□ -1.51
SOF1YLL011W TAT2P38967 592 aa5.64□□□□□ -1.51
SOF1YLL011W NUP82P40368 713 aa5.64□□□□□ -1.51
SOF1YLL011W BDS1Q08347 646 aa5.64□□□□□ -1.51
SOF1YLL011W NGR1P32831 672 aaKnown RBP5.64□□□□□ -1.51
SOF1YLL011W VPS35P34110 944 aa5.64□□□□□ -1.51
SOF1YLL011W PMC1P38929 1173 aaPredicted RBP5.64□□□□□ -1.51
SOF1YLL011W NMA111P53920 997 aa5.64□□□□□ -1.51
SOF1YLL011W PEX29Q03370 554 aa5.64□□□□□ -1.51
SOF1YLL011W PML39Q03760 334 aa5.64□□□□□ -1.51
SOF1YLL011W TOS4Q06266 489 aa5.64□□□□□ -1.51
SOF1YLL011W TRP5P00931 707 aaKnown RBP5.63□□□□□ -1.51
SOF1YLL011W RAD2P07276 1031 aa5.63□□□□□ -1.51
SOF1YLL011W RPS6AP0CX37 236 aaKnown RBP5.63□□□□□ -1.51
SOF1YLL011W RPS6BP0CX38 236 aaPredicted RBP5.63□□□□□ -1.51
SOF1YLL011W RAD4P14736 754 aa5.63□□□□□ -1.51
SOF1YLL011W GCD11P32481 527 aaKnown RBP5.63□□□□□ -1.51
SOF1YLL011W TIM23P32897 222 aa5.63□□□□□ -1.51
SOF1YLL011W YGL081WP53156 320 aa5.63□□□□□ -1.51
SOF1YLL011W OXR1Q08952 273 aa5.63□□□□□ -1.51
SOF1YLL011W APC11Q12157 165 aa5.63□□□□□ -1.51
SOF1YLL011W TY1A-DR4O74302 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-HP0C2I4 478 aaKnown RBP5.62□□□□□ -1.51
SOF1YLL011W TY1A-AP0CX57 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-PR1P0CX58 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-ORP0CX59 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-PR2P0CX60 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-DR5P0CX65 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-ER2P0CX66 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-GR3P0CX67 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-LR1P0CX68 440 aa5.62□□□□□ -1.51
SOF1YLL011W TY1A-MR2P0CX69 440 aa5.62□□□□□ -1.51
SOF1YLL011W PRI2P20457 528 aa5.62□□□□□ -1.51
SOF1YLL011W UBP12P39538 1254 aa5.62□□□□□ -1.51
SOF1YLL011W PAC1P39946 494 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms