RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C YPR053CQ6Q5F3 151 aa5.87□□□□□ -1.47
RPL40BYKR094C TDA6Q06466 467 aa5.86□□□□□ -1.47
RPL40BYKR094C SOH1P38633 127 aa5.85□□□□□ -1.47
RPL40BYKR094C ALA1P40825 983 aaKnown RBP5.85□□□□□ -1.47
RPL40BYKR094C SUM1P46676 1062 aa5.85□□□□□ -1.47
RPL40BYKR094C HPC2Q01448 625 aa5.85□□□□□ -1.47
RPL40BYKR094C RPN1P38764 993 aaKnown RBP5.84□□□□□ -1.47
RPL40BYKR094C SLX8P40072 274 aa5.84□□□□□ -1.47
RPL40BYKR094C JJJ2P46997 583 aa5.84□□□□□ -1.47
RPL40BYKR094C PKC1P24583 1151 aa5.83□□□□□ -1.48
RPL40BYKR094C BIO2P32451 375 aa5.83□□□□□ -1.48
RPL40BYKR094C SHM1P37292 490 aaPredicted RBP5.83□□□□□ -1.48
RPL40BYKR094C BRL1P38770 471 aa5.83□□□□□ -1.48
RPL40BYKR094C TFB3Q03290 321 aa5.83□□□□□ -1.48
RPL40BYKR094C HDA3Q06623 655 aa5.83□□□□□ -1.48
RPL40BYKR094C IRE1P32361 1115 aa5.81□□□□□ -1.48
RPL40BYKR094C SKN7P38889 622 aa5.81□□□□□ -1.48
RPL40BYKR094C NRD1P53617 575 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
RPL40BYKR094C YNR014WP53719 212 aa5.81□□□□□ -1.48
RPL40BYKR094C UTP13Q05946 817 aaKnown RBP5.81□□□□□ -1.48
RPL40BYKR094C ATG3P40344 310 aa5.8□□□□□ -1.48
RPL40BYKR094C YMR187CQ03236 431 aa5.8□□□□□ -1.48
RPL40BYKR094C PSH1Q12161 406 aa5.8□□□□□ -1.48
RPL40BYKR094C GPM1P00950 247 aaKnown RBP5.79□□□□□ -1.48
RPL40BYKR094C FPS1P23900 669 aa5.79□□□□□ -1.48
RPL40BYKR094C YPP1P46951 817 aa5.79□□□□□ -1.48
RPL40BYKR094C YNL108CP53929 270 aa5.79□□□□□ -1.48
RPL40BYKR094C RQC2Q12532 1038 aaKnown RBP5.79□□□□□ -1.48
RPL40BYKR094C ENO2P00925 437 aaKnown RBP5.78□□□□□ -1.48
RPL40BYKR094C PDC6P26263 563 aaKnown RBP5.78□□□□□ -1.48
RPL40BYKR094C MRPL16P38064 232 aa5.78□□□□□ -1.48
RPL40BYKR094C SUP45P12385 437 aaKnown RBP5.77□□□□□ -1.49
RPL40BYKR094C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
RPL40BYKR094C SBP1P10080 294 aaKnown RBP5.76□□□□□ -1.49
RPL40BYKR094C MCX1P38323 520 aaPredicted RBP5.76□□□□□ -1.49
RPL40BYKR094C STB3Q12427 513 aa5.76□□□□□ -1.49
RPL40BYKR094C RPS31P05759 152 aaKnown RBP5.75□□□□□ -1.49
RPL40BYKR094C YCK2P23292 546 aaKnown RBP5.75□□□□□ -1.49
RPL40BYKR094C BOI2P39969 1040 aa5.75□□□□□ -1.49
RPL40BYKR094C YPQ2Q06328 317 aa5.75□□□□□ -1.49
RPL40BYKR094C SWI5P08153 709 aa5.74□□□□□ -1.49
RPL40BYKR094C RDS2P19541 446 aaKnown RBP5.73□□□□□ -1.49
RPL40BYKR094C RIM21P48565 533 aa5.73□□□□□ -1.49
RPL40BYKR094C YDR215CQ12240 137 aa5.73□□□□□ -1.49
RPL40BYKR094C PDC5P16467 563 aaKnown RBP5.72□□□□□ -1.49
RPL40BYKR094C SLN1P39928 1220 aaPredicted RBP5.72□□□□□ -1.49
RPL40BYKR094C AIM9P40053 627 aaKnown RBP5.72□□□□□ -1.49
RPL40BYKR094C SPR3P41901 512 aa5.72□□□□□ -1.49
RPL40BYKR094C KNS1P32350 737 aaPredicted RBP5.71□□□□□ -1.5
RPL40BYKR094C TY1A-DR2Q03964 440 aaKnown RBP5.71□□□□□ -1.5
RPL40BYKR094C YNL165WP53891 406 aa5.7□□□□□ -1.5
RPL40BYKR094C MCA1Q08601 432 aa5.7□□□□□ -1.5
RPL40BYKR094C LEU1P07264 779 aaKnown RBP5.69□□□□□ -1.5
RPL40BYKR094C ALD2P47771 506 aa5.69□□□□□ -1.5
RPL40BYKR094C RPS6AP0CX37 236 aaKnown RBP5.68□□□□□ -1.5
RPL40BYKR094C RPS6BP0CX38 236 aaPredicted RBP5.68□□□□□ -1.5
RPL40BYKR094C MET1P36150 593 aa5.68□□□□□ -1.5
RPL40BYKR094C YJL007CP47080 104 aa5.68□□□□□ -1.5
RPL40BYKR094C AMN1P38285 549 aaPredicted RBP5.67□□□□□ -1.5
RPL40BYKR094C MSC7P38694 644 aa5.67□□□□□ -1.5
RPL40BYKR094C MCM1P11746 286 aa5.65□□□□□ -1.5
RPL40BYKR094C NTH2P35172 780 aa5.65□□□□□ -1.5
RPL40BYKR094C RGP1P16664 663 aa5.64□□□□□ -1.51
RPL40BYKR094C PDI1P17967 522 aaKnown RBP5.64□□□□□ -1.51
RPL40BYKR094C MLF3P32047 452 aa5.64□□□□□ -1.51
RPL40BYKR094C TAT1P38085 619 aa5.64□□□□□ -1.51
RPL40BYKR094C LSB6P42951 607 aa5.64□□□□□ -1.51
RPL40BYKR094C YFL034WP43564 1073 aa5.64□□□□□ -1.51
RPL40BYKR094C ENO1P00924 437 aaKnown RBP5.63□□□□□ -1.51
RPL40BYKR094C YTA6P40328 754 aa5.63□□□□□ -1.51
RPL40BYKR094C PRY1P47032 299 aa5.63□□□□□ -1.51
RPL40BYKR094C MRX10Q05648 414 aa5.63□□□□□ -1.51
RPL40BYKR094C Q0182Q9ZZW1 134 aa5.61□□□□□ -1.51
RPL40BYKR094C RPP1AP05318 106 aaPredicted RBP5.59□□□□□ -1.51
RPL40BYKR094C BIM1P40013 344 aa5.59□□□□□ -1.51
RPL40BYKR094C ATG32P40458 529 aa5.59□□□□□ -1.51
RPL40BYKR094C TSC13Q99190 310 aa5.59□□□□□ -1.51
RPL40BYKR094C CYT1P07143 309 aa5.58□□□□□ -1.52
RPL40BYKR094C TIF1P10081 395 aaKnown RBP5.58□□□□□ -1.52
RPL40BYKR094C RTG2P32608 588 aaKnown RBP5.57□□□□□ -1.52
RPL40BYKR094C PGM2P37012 569 aaKnown RBP5.57□□□□□ -1.52
RPL40BYKR094C MTO1P53070 669 aa5.57□□□□□ -1.52
RPL40BYKR094C PEP12P32854 288 aa5.56□□□□□ -1.52
RPL40BYKR094C ALG14P38242 237 aa5.56□□□□□ -1.52
RPL40BYKR094C TPS3P38426 1054 aaKnown RBP5.56□□□□□ -1.52
RPL40BYKR094C PRK1P40494 810 aa5.56□□□□□ -1.52
RPL40BYKR094C YPL034WQ03083 165 aa5.56□□□□□ -1.52
RPL40BYKR094C NHA1Q99271 985 aa5.56□□□□□ -1.52
RPL40BYKR094C MAC1P35192 417 aa5.54□□□□□ -1.52
RPL40BYKR094C ACS2P52910 683 aaKnown RBP5.54□□□□□ -1.52
RPL40BYKR094C HEH2Q03281 663 aa5.54□□□□□ -1.52
RPL40BYKR094C KTR7P40504 517 aa5.53□□□□□ -1.52
RPL40BYKR094C RPL34BP40525 121 aaKnown RBP5.53□□□□□ -1.52
RPL40BYKR094C BUD9P53226 547 aa5.53□□□□□ -1.52
RPL40BYKR094C NAR1P23503 491 aaKnown RBP5.52□□□□□ -1.53
RPL40BYKR094C NCL1P38205 684 aaKnown RBP5.52□□□□□ -1.53
RPL40BYKR094C SKP1P52286 194 aa5.52□□□□□ -1.53
RPL40BYKR094C ALO1P54783 526 aaKnown RBP5.52□□□□□ -1.53
RPL40BYKR094C CUS1Q02554 436 aaPredicted RBP5.52□□□□□ -1.53
RPL40BYKR094C GLT1Q12680 2145 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms