RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W NTH2P35172 780 aa5.96□□□□□ -1.46
CTK1YKL139W NUT2Q06213 157 aa5.96□□□□□ -1.46
CTK1YKL139W ATG20Q07528 640 aa5.96□□□□□ -1.46
CTK1YKL139W TRK1P12685 1235 aa5.95□□□□□ -1.46
CTK1YKL139W SUV3P32580 737 aa5.95□□□□□ -1.46
CTK1YKL139W ACF4P47129 309 aa5.95□□□□□ -1.46
CTK1YKL139W FRT1Q99332 602 aa5.95□□□□□ -1.46
CTK1YKL139W YPL062WQ02781 134 aa5.94□□□□□ -1.46
CTK1YKL139W UBP1P25037 809 aa5.93□□□□□ -1.46
CTK1YKL139W CYT1P07143 309 aa5.92□□□□□ -1.46
CTK1YKL139W RPS6AP0CX37 236 aaKnown RBP5.92□□□□□ -1.46
CTK1YKL139W RPS6BP0CX38 236 aaPredicted RBP5.92□□□□□ -1.46
CTK1YKL139W KIP2P28743 706 aa5.92□□□□□ -1.46
CTK1YKL139W SEC8P32855 1065 aa5.92□□□□□ -1.46
CTK1YKL139W OYE2Q03558 400 aaKnown RBP5.92□□□□□ -1.46
CTK1YKL139W LSO1Q3E827 93 aa5.92□□□□□ -1.46
CTK1YKL139W CWH41P53008 833 aa5.91□□□□□ -1.46
CTK1YKL139W APP1P53933 587 aa5.91□□□□□ -1.46
CTK1YKL139W MET4P32389 672 aa5.9□□□□□ -1.46
CTK1YKL139W BOI1P38041 980 aaKnown RBP5.9□□□□□ -1.46
CTK1YKL139W GYP1Q08484 637 aa5.9□□□□□ -1.46
CTK1YKL139W STB3Q12427 513 aa5.9□□□□□ -1.46
CTK1YKL139W SWI5P08153 709 aa5.89□□□□□ -1.47
CTK1YKL139W NGR1P32831 672 aaKnown RBP5.89□□□□□ -1.47
CTK1YKL139W MGE1P38523 228 aa5.89□□□□□ -1.47
CTK1YKL139W EMW1P42842 904 aaKnown RBP5.89□□□□□ -1.47
CTK1YKL139W SAS4Q04003 481 aa5.89□□□□□ -1.47
CTK1YKL139W UTR2P32623 467 aa5.89□□□□□ -1.47
CTK1YKL139W PUS5Q06244 254 aa5.89□□□□□ -1.47
CTK1YKL139W YBR197CP38306 217 aa5.88□□□□□ -1.47
CTK1YKL139W FOX2Q02207 900 aaKnown RBP5.88□□□□□ -1.47
CTK1YKL139W SVF1Q05515 481 aa5.88□□□□□ -1.47
CTK1YKL139W SPT2P06843 333 aaPredicted RBP5.87□□□□□ -1.47
CTK1YKL139W ISC10P32645 267 aa5.87□□□□□ -1.47
CTK1YKL139W SPR3P41901 512 aa5.87□□□□□ -1.47
CTK1YKL139W YJR107WP47145 328 aa5.87□□□□□ -1.47
CTK1YKL139W ISU1Q03020 165 aa5.87□□□□□ -1.47
CTK1YKL139W TRS120Q04183 1289 aa5.87□□□□□ -1.47
CTK1YKL139W MET1P36150 593 aa5.86□□□□□ -1.47
CTK1YKL139W SYH1Q02875 849 aaKnown RBP5.86□□□□□ -1.47
CTK1YKL139W CAB1Q04430 367 aa5.86□□□□□ -1.47
CTK1YKL139W DAT1P13483 248 aaKnown RBP5.85□□□□□ -1.47
CTK1YKL139W FBP26P32604 452 aa5.85□□□□□ -1.47
CTK1YKL139W MKS1P34072 584 aa5.85□□□□□ -1.47
CTK1YKL139W JIP5Q06214 492 aaPredicted RBP5.85□□□□□ -1.47
CTK1YKL139W GPI13Q07830 1017 aa5.85□□□□□ -1.47
CTK1YKL139W RPB10P22139 70 aa5.84□□□□□ -1.47
CTK1YKL139W TBS1P38114 1094 aa5.84□□□□□ -1.47
CTK1YKL139W BDP1P46678 594 aa5.84□□□□□ -1.47
CTK1YKL139W YTA7P40340 1379 aa5.84□□□□□ -1.47
CTK1YKL139W OCA5P38738 679 aa5.84□□□□□ -1.48
CTK1YKL139W AMS1P22855 1083 aa5.83□□□□□ -1.48
CTK1YKL139W MRF1P30775 413 aaPredicted RBP5.83□□□□□ -1.48
CTK1YKL139W FYV10P40492 516 aa5.83□□□□□ -1.48
CTK1YKL139W APC11Q12157 165 aa5.83□□□□□ -1.48
CTK1YKL139W FRK1Q03002 865 aaPredicted RBP5.82□□□□□ -1.48
CTK1YKL139W PHO4P07270 312 aaKnown RBP5.81□□□□□ -1.48
CTK1YKL139W RPT1P33299 467 aaKnown RBP5.81□□□□□ -1.48
CTK1YKL139W UFD2P54860 961 aa5.81□□□□□ -1.48
CTK1YKL139W MNL2Q12205 849 aa5.81□□□□□ -1.48
CTK1YKL139W WTM2Q12206 467 aa5.81□□□□□ -1.48
CTK1YKL139W STE6P12866 1290 aa5.8□□□□□ -1.48
CTK1YKL139W SDH2P21801 266 aa5.8□□□□□ -1.48
CTK1YKL139W NAP1P25293 417 aaKnown RBP5.8□□□□□ -1.48
CTK1YKL139W MCM2P29469 868 aa5.8□□□□□ -1.48
CTK1YKL139W SUT1P53032 299 aaKnown RBP5.8□□□□□ -1.48
CTK1YKL139W DFG5Q05031 458 aa5.8□□□□□ -1.48
CTK1YKL139W MAG2Q06436 670 aaKnown RBP5.8□□□□□ -1.48
CTK1YKL139W HXT5P38695 592 aa5.8□□□□□ -1.48
CTK1YKL139W CST6P40535 587 aa5.8□□□□□ -1.48
CTK1YKL139W NNF1P47149 201 aa5.8□□□□□ -1.48
CTK1YKL139W SPR28Q04921 423 aa5.8□□□□□ -1.48
CTK1YKL139W BDS1Q08347 646 aa5.8□□□□□ -1.48
CTK1YKL139W MRPL33P20084 86 aa5.79□□□□□ -1.48
CTK1YKL139W KTR2P33550 425 aa5.79□□□□□ -1.48
CTK1YKL139W DAK2P43550 591 aa5.79□□□□□ -1.48
CTK1YKL139W YPQ2Q06328 317 aa5.79□□□□□ -1.48
CTK1YKL139W RPP2BP02400 110 aaKnown RBP5.78□□□□□ -1.48
CTK1YKL139W GBP2P25555 427 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
CTK1YKL139W MRT4P33201 236 aaKnown RBP5.78□□□□□ -1.48
CTK1YKL139W YBL086CP38177 466 aa5.78□□□□□ -1.48
CTK1YKL139W UTP7P40055 554 aaKnown RBP5.78□□□□□ -1.48
CTK1YKL139W MCM1P11746 286 aa5.77□□□□□ -1.49
CTK1YKL139W GCD6P32501 712 aaKnown RBP5.77□□□□□ -1.49
CTK1YKL139W SCD5P34758 872 aa5.76□□□□□ -1.49
CTK1YKL139W SUM1P46676 1062 aa5.76□□□□□ -1.49
CTK1YKL139W YNL011CP53980 444 aa5.76□□□□□ -1.49
CTK1YKL139W IOC4Q04213 475 aa5.76□□□□□ -1.49
CTK1YKL139W VMA3P25515 160 aa5.75□□□□□ -1.49
CTK1YKL139W CDC55Q00362 526 aa5.75□□□□□ -1.49
CTK1YKL139W PEP7P32609 515 aa5.74□□□□□ -1.49
CTK1YKL139W VPS35P34110 944 aa5.74□□□□□ -1.49
CTK1YKL139W RPS26AP39938 119 aaKnown RBP5.74□□□□□ -1.49
CTK1YKL139W RPS26BP39939 119 aaKnown RBP5.74□□□□□ -1.49
CTK1YKL139W VAC8P39968 578 aa5.74□□□□□ -1.49
CTK1YKL139W DLD3P39976 496 aaKnown RBP5.74□□□□□ -1.49
CTK1YKL139W MAD1P40957 749 aa5.74□□□□□ -1.49
CTK1YKL139W ALD6P54115 500 aaKnown RBP5.74□□□□□ -1.49
CTK1YKL139W SMC1P32908 1225 aa5.73□□□□□ -1.49
CTK1YKL139W HXT8P40886 569 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms