RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C UTR2P32623 467 aa8.1□□□□□ -1.11
YIR043CYIR043C EMW1P42842 904 aaKnown RBP8.1□□□□□ -1.11
YIR043CYIR043C SYH1Q02875 849 aaKnown RBP8.1□□□□□ -1.11
YIR043CYIR043C UBP1P25037 809 aa8.09□□□□□ -1.11
YIR043CYIR043C ACF4P47129 309 aa8.09□□□□□ -1.11
YIR043CYIR043C NUT2Q06213 157 aa8.09□□□□□ -1.11
YIR043CYIR043C WHI5Q12416 295 aa8.09□□□□□ -1.11
YIR043CYIR043C SWI5P08153 709 aa8.08□□□□□ -1.12
YIR043CYIR043C DAT1P13483 248 aaKnown RBP8.08□□□□□ -1.12
YIR043CYIR043C MKS1P34072 584 aa8.08□□□□□ -1.12
YIR043CYIR043C BDP1P46678 594 aa8.08□□□□□ -1.12
YIR043CYIR043C TBS1P38114 1094 aa8.07□□□□□ -1.12
YIR043CYIR043C FRK1Q03002 865 aaPredicted RBP8.07□□□□□ -1.12
YIR043CYIR043C ISU1Q03020 165 aa8.07□□□□□ -1.12
YIR043CYIR043C RRP15Q06511 250 aaPredicted RBP8.07□□□□□ -1.12
YIR043CYIR043C FRT1Q99332 602 aa8.07□□□□□ -1.12
YIR043CYIR043C SPT2P06843 333 aaPredicted RBP8.06□□□□□ -1.12
YIR043CYIR043C ATE1P16639 503 aa8.06□□□□□ -1.12
YIR043CYIR043C LSO1Q3E827 93 aa8.06□□□□□ -1.12
YIR043CYIR043C FBP26P32604 452 aa8.05□□□□□ -1.12
YIR043CYIR043C NGR1P32831 672 aaKnown RBP8.05□□□□□ -1.12
YIR043CYIR043C ORC1P54784 914 aaPredicted RBP8.05□□□□□ -1.12
YIR043CYIR043C BOI1P38041 980 aaKnown RBP8.04□□□□□ -1.12
YIR043CYIR043C ISC10P32645 267 aa8.03□□□□□ -1.12
YIR043CYIR043C YBR197CP38306 217 aa8.03□□□□□ -1.12
YIR043CYIR043C FOX2Q02207 900 aaKnown RBP8.03□□□□□ -1.12
YIR043CYIR043C SDH2P21801 266 aa8.02□□□□□ -1.13
YIR043CYIR043C SIS1P25294 352 aaKnown RBP8.02□□□□□ -1.13
YIR043CYIR043C CST6P40535 587 aa8.02□□□□□ -1.13
YIR043CYIR043C MGE1P38523 228 aa8.01□□□□□ -1.13
YIR043CYIR043C OYE2Q03558 400 aaKnown RBP8.01□□□□□ -1.13
YIR043CYIR043C DFG5Q05031 458 aa8.01□□□□□ -1.13
YIR043CYIR043C SEC8P32855 1065 aa8□□□□□ -1.13
YIR043CYIR043C VRP1P37370 817 aa8□□□□□ -1.13
YIR043CYIR043C SPR3P41901 512 aa8□□□□□ -1.13
YIR043CYIR043C WTM2Q12206 467 aa8□□□□□ -1.13
YIR043CYIR043C RPP2BP02400 110 aaKnown RBP7.99□□□□□ -1.13
YIR043CYIR043C MET4P32389 672 aa7.99□□□□□ -1.13
YIR043CYIR043C TRS120Q04183 1289 aa7.99□□□□□ -1.13
YIR043CYIR043C CAB1Q04430 367 aa7.99□□□□□ -1.13
YIR043CYIR043C STE6P12866 1290 aa7.98□□□□□ -1.13
YIR043CYIR043C MRT4P33201 236 aaKnown RBP7.97□□□□□ -1.13
YIR043CYIR043C BDS1Q08347 646 aa7.97□□□□□ -1.13
YIR043CYIR043C RPB10P22139 70 aa7.96□□□□□ -1.14
YIR043CYIR043C YBL086CP38177 466 aa7.96□□□□□ -1.14
YIR043CYIR043C UTP7P40055 554 aaKnown RBP7.96□□□□□ -1.14
YIR043CYIR043C YJR107WP47145 328 aa7.94□□□□□ -1.14
YIR043CYIR043C STB3Q12427 513 aa7.94□□□□□ -1.14
YIR043CYIR043C DLD3P39976 496 aaKnown RBP7.93□□□□□ -1.14
YIR043CYIR043C SUT1P53032 299 aaKnown RBP7.93□□□□□ -1.14
YIR043CYIR043C UFD2P54860 961 aa7.93□□□□□ -1.14
YIR043CYIR043C SVF1Q05515 481 aa7.93□□□□□ -1.14
YIR043CYIR043C GPI13Q07830 1017 aa7.93□□□□□ -1.14
YIR043CYIR043C APC11Q12157 165 aa7.93□□□□□ -1.14
YIR043CYIR043C MET1P36150 593 aa7.92□□□□□ -1.14
YIR043CYIR043C HXT5P38695 592 aa7.92□□□□□ -1.14
YIR043CYIR043C MCM1P11746 286 aa7.91□□□□□ -1.14
YIR043CYIR043C MRPL33P20084 86 aa7.91□□□□□ -1.14
YIR043CYIR043C SUM1P46676 1062 aa7.91□□□□□ -1.14
YIR043CYIR043C JIP5Q06214 492 aaPredicted RBP7.91□□□□□ -1.14
YIR043CYIR043C YPQ2Q06328 317 aa7.91□□□□□ -1.14
YIR043CYIR043C HED1Q03937 162 aa7.9□□□□□ -1.14
YIR043CYIR043C PHO4P07270 312 aaKnown RBP7.89□□□□□ -1.15
YIR043CYIR043C SCD5P34758 872 aa7.89□□□□□ -1.15
YIR043CYIR043C MNL2Q12205 849 aa7.89□□□□□ -1.15
YIR043CYIR043C RPT1P33299 467 aaKnown RBP7.88□□□□□ -1.15
YIR043CYIR043C FYV10P40492 516 aa7.88□□□□□ -1.15
YIR043CYIR043C ALA1P40825 983 aaKnown RBP7.87□□□□□ -1.15
YIR043CYIR043C VMA3P25515 160 aa7.86□□□□□ -1.15
YIR043CYIR043C MCM2P29469 868 aa7.86□□□□□ -1.15
YIR043CYIR043C YNL011CP53980 444 aa7.86□□□□□ -1.15
YIR043CYIR043C GCD6P32501 712 aaKnown RBP7.85□□□□□ -1.15
YIR043CYIR043C KTR2P33550 425 aa7.85□□□□□ -1.15
YIR043CYIR043C DAK2P43550 591 aa7.85□□□□□ -1.15
YIR043CYIR043C Q0182Q9ZZW1 134 aa7.85□□□□□ -1.15
YIR043CYIR043C SMC1P32908 1225 aa7.84□□□□□ -1.15
YIR043CYIR043C AMS1P22855 1083 aa7.83□□□□□ -1.16
YIR043CYIR043C BCK2P33306 851 aa7.83□□□□□ -1.16
YIR043CYIR043C LDH1P38139 375 aa7.83□□□□□ -1.16
YIR043CYIR043C HXT8P40886 569 aa7.83□□□□□ -1.16
YIR043CYIR043C CLA4P48562 842 aa7.83□□□□□ -1.16
YIR043CYIR043C CDC55Q00362 526 aa7.83□□□□□ -1.16
YIR043CYIR043C SPR28Q04921 423 aa7.83□□□□□ -1.16
YIR043CYIR043C MET32Q12041 191 aa7.83□□□□□ -1.16
YIR043CYIR043C NAP1P25293 417 aaKnown RBP7.82□□□□□ -1.16
YIR043CYIR043C UGA3P26370 528 aa7.82□□□□□ -1.16
YIR043CYIR043C RTT106P40161 455 aa7.82□□□□□ -1.16
YIR043CYIR043C SAM37P50110 327 aa7.82□□□□□ -1.16
YIR043CYIR043C PEP7P32609 515 aa7.81□□□□□ -1.16
YIR043CYIR043C VPS35P34110 944 aa7.81□□□□□ -1.16
YIR043CYIR043C YNL165WP53891 406 aa7.81□□□□□ -1.16
YIR043CYIR043C MLF3P32047 452 aa7.8□□□□□ -1.16
YIR043CYIR043C OCA5P38738 679 aa7.8□□□□□ -1.16
YIR043CYIR043C DYS1P38791 387 aa7.8□□□□□ -1.16
YIR043CYIR043C NNF1P47149 201 aa7.8□□□□□ -1.16
YIR043CYIR043C MAG2Q06436 670 aaKnown RBP7.8□□□□□ -1.16
YIR043CYIR043C UTP4Q06679 776 aaKnown RBP7.8□□□□□ -1.16
YIR043CYIR043C YTA7P40340 1379 aa7.8□□□□□ -1.16
YIR043CYIR043C RPS26AP39938 119 aaKnown RBP7.79□□□□□ -1.16
YIR043CYIR043C RPS26BP39939 119 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms