RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W SWI5P08153 709 aa8.14□□□□□ -1.11
SEC28YIL076W MSN5P52918 1224 aa8.14□□□□□ -1.11
SEC28YIL076W PDI1P17967 522 aaKnown RBP8.13□□□□□ -1.11
SEC28YIL076W YFL034WP43564 1073 aa8.13□□□□□ -1.11
SEC28YIL076W TY1A-MR1Q04215 440 aa8.13□□□□□ -1.11
SEC28YIL076W TTI1P36097 1038 aa8.12□□□□□ -1.11
SEC28YIL076W TY1A-DR3Q12441 440 aa8.12□□□□□ -1.11
SEC28YIL076W TSC13Q99190 310 aa8.12□□□□□ -1.11
SEC28YIL076W RPS6AP0CX37 236 aaKnown RBP8.11□□□□□ -1.11
SEC28YIL076W RPS6BP0CX38 236 aaPredicted RBP8.11□□□□□ -1.11
SEC28YIL076W SLA1P32790 1244 aa8.11□□□□□ -1.11
SEC28YIL076W NTH2P35172 780 aa8.11□□□□□ -1.11
SEC28YIL076W ALA1P40825 983 aaKnown RBP8.11□□□□□ -1.11
SEC28YIL076W AHP1P38013 176 aaKnown RBP8.1□□□□□ -1.11
SEC28YIL076W NAM8Q00539 523 aaKnown RBP8.1□□□□□ -1.11
SEC28YIL076W CCP1P00431 361 aa8.09□□□□□ -1.11
SEC28YIL076W PHO87P25360 923 aa8.08□□□□□ -1.12
SEC28YIL076W CPS1P27614 576 aa8.08□□□□□ -1.12
SEC28YIL076W JJJ2P46997 583 aa8.08□□□□□ -1.12
SEC28YIL076W ACS2P52910 683 aaKnown RBP8.08□□□□□ -1.12
SEC28YIL076W YPQ2Q06328 317 aa8.08□□□□□ -1.12
SEC28YIL076W UBP15P50101 1230 aa8.07□□□□□ -1.12
SEC28YIL076W GAL2P13181 574 aa8.06□□□□□ -1.12
SEC28YIL076W TGL4P36165 910 aa8.06□□□□□ -1.12
SEC28YIL076W HAP4P14064 554 aa8.05□□□□□ -1.12
SEC28YIL076W SHM1P37292 490 aaPredicted RBP8.05□□□□□ -1.12
SEC28YIL076W YGR035CP53222 116 aa8.05□□□□□ -1.12
SEC28YIL076W HPF1Q05164 967 aa8.05□□□□□ -1.12
SEC28YIL076W CYT1P07143 309 aa8.04□□□□□ -1.12
SEC28YIL076W IRE1P32361 1115 aa8.03□□□□□ -1.12
SEC28YIL076W CUZ1P53899 274 aa8.03□□□□□ -1.12
SEC28YIL076W GAS4Q08271 471 aa8.03□□□□□ -1.12
SEC28YIL076W ECM23Q02710 187 aa8.02□□□□□ -1.13
SEC28YIL076W MCM1P11746 286 aa8.01□□□□□ -1.13
SEC28YIL076W ROM1P53046 1155 aa8.01□□□□□ -1.13
SEC28YIL076W PUP1P25043 261 aa7.98□□□□□ -1.13
SEC28YIL076W PDC6P26263 563 aaKnown RBP7.98□□□□□ -1.13
SEC28YIL076W YNL165WP53891 406 aa7.98□□□□□ -1.13
SEC28YIL076W PSH1Q12161 406 aa7.98□□□□□ -1.13
SEC28YIL076W RPS31P05759 152 aaKnown RBP7.97□□□□□ -1.13
SEC28YIL076W UBP1P25037 809 aa7.97□□□□□ -1.13
SEC28YIL076W YMR265CQ03508 461 aaKnown RBP7.97□□□□□ -1.13
SEC28YIL076W RLF2Q12495 606 aa7.97□□□□□ -1.13
SEC28YIL076W DIT1P21623 536 aa7.96□□□□□ -1.14
SEC28YIL076W SSA4P22202 642 aaKnown RBP7.96□□□□□ -1.14
SEC28YIL076W UBX7P38349 436 aa7.96□□□□□ -1.14
SEC28YIL076W RGA2Q06407 1009 aa7.96□□□□□ -1.14
SEC28YIL076W TRK2P28584 889 aa7.95□□□□□ -1.14
SEC28YIL076W LYS5P50113 272 aa7.95□□□□□ -1.14
SEC28YIL076W MLF3P32047 452 aa7.94□□□□□ -1.14
SEC28YIL076W CEM1P39525 442 aa7.94□□□□□ -1.14
SEC28YIL076W DPH6Q12429 685 aa7.94□□□□□ -1.14
SEC28YIL076W VAN1P23642 535 aa7.93□□□□□ -1.14
SEC28YIL076W NGR1P32831 672 aaKnown RBP7.93□□□□□ -1.14
SEC28YIL076W JJJ3P47138 172 aa7.93□□□□□ -1.14
SEC28YIL076W KRE33P53914 1056 aaKnown RBP7.93□□□□□ -1.14
SEC28YIL076W Q0182Q9ZZW1 134 aa7.93□□□□□ -1.14
SEC28YIL076W YTA6P40328 754 aa7.92□□□□□ -1.14
SEC28YIL076W YML083CQ04526 418 aa7.92□□□□□ -1.14
SEC28YIL076W ALD2P47771 506 aa7.91□□□□□ -1.14
SEC28YIL076W STB3Q12427 513 aa7.91□□□□□ -1.14
SEC28YIL076W LEU1P07264 779 aaKnown RBP7.9□□□□□ -1.14
SEC28YIL076W MRPL16P38064 232 aa7.9□□□□□ -1.14
SEC28YIL076W ADE12P80210 433 aaKnown RBP7.9□□□□□ -1.14
SEC28YIL076W SYT1Q06836 1226 aa7.9□□□□□ -1.14
SEC28YIL076W NOB1Q08444 459 aaKnown RBP7.9□□□□□ -1.14
SEC28YIL076W TRS33Q99394 268 aa7.9□□□□□ -1.14
SEC28YIL076W YDR461C-AQ2V2P7 80 aa7.89□□□□□ -1.15
SEC28YIL076W SCD5P34758 872 aa7.88□□□□□ -1.15
SEC28YIL076W HXT5P38695 592 aa7.88□□□□□ -1.15
SEC28YIL076W SUV3P32580 737 aa7.87□□□□□ -1.15
SEC28YIL076W CWH41P53008 833 aa7.87□□□□□ -1.15
SEC28YIL076W UTP4Q06679 776 aaKnown RBP7.86□□□□□ -1.15
SEC28YIL076W FPS1P23900 669 aa7.85□□□□□ -1.15
SEC28YIL076W SPR3P41901 512 aa7.85□□□□□ -1.15
SEC28YIL076W RGP1P16664 663 aa7.84□□□□□ -1.15
SEC28YIL076W MTO1P53070 669 aa7.84□□□□□ -1.15
SEC28YIL076W CAB1Q04430 367 aa7.84□□□□□ -1.15
SEC28YIL076W SUB2Q07478 446 aaKnown RBP7.84□□□□□ -1.15
SEC28YIL076W FOX2Q02207 900 aaKnown RBP7.83□□□□□ -1.16
SEC28YIL076W PUF6Q04373 656 aaKnown RBP7.82□□□□□ -1.16
SEC28YIL076W ALD4P46367 519 aaKnown RBP7.81□□□□□ -1.16
SEC28YIL076W PUN1Q06991 263 aa7.81□□□□□ -1.16
SEC28YIL076W RPP1AP05318 106 aaPredicted RBP7.78□□□□□ -1.16
SEC28YIL076W KAP122P32767 1081 aa7.78□□□□□ -1.16
SEC28YIL076W YBR197CP38306 217 aa7.78□□□□□ -1.16
SEC28YIL076W QDR2P40474 542 aa7.78□□□□□ -1.16
SEC28YIL076W SRS2P12954 1174 aa7.77□□□□□ -1.17
SEC28YIL076W CUS1Q02554 436 aaPredicted RBP7.77□□□□□ -1.17
SEC28YIL076W CWC15Q03772 175 aaKnown RBP7.77□□□□□ -1.17
SEC28YIL076W GPM1P00950 247 aaKnown RBP7.76□□□□□ -1.17
SEC28YIL076W AI1P03875 834 aa7.76□□□□□ -1.17
SEC28YIL076W MRPL33P20084 86 aa7.76□□□□□ -1.17
SEC28YIL076W MSC7P38694 644 aa7.76□□□□□ -1.17
SEC28YIL076W TY1A-DR2Q03964 440 aaKnown RBP7.76□□□□□ -1.17
SEC28YIL076W ISC10P32645 267 aa7.75□□□□□ -1.17
SEC28YIL076W MDJ1P35191 511 aa7.75□□□□□ -1.17
SEC28YIL076W TPS3P38426 1054 aaKnown RBP7.75□□□□□ -1.17
SEC28YIL076W SKP1P52286 194 aa7.75□□□□□ -1.17
SEC28YIL076W RPC31P17890 251 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms