RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C UTP7P40055 554 aaKnown RBP7.5□□□□□ -1.21
PCI8YIL071C MCM16Q12262 181 aa7.5□□□□□ -1.21
PCI8YIL071C FPS1P23900 669 aa7.49□□□□□ -1.21
PCI8YIL071C APL6P46682 809 aa7.49□□□□□ -1.21
PCI8YIL071C MCX1P38323 520 aaPredicted RBP7.47□□□□□ -1.21
PCI8YIL071C SUM1P46676 1062 aa7.47□□□□□ -1.21
PCI8YIL071C GPM1P00950 247 aaKnown RBP7.46□□□□□ -1.22
PCI8YIL071C JJJ2P46997 583 aa7.46□□□□□ -1.22
PCI8YIL071C BOI2P39969 1040 aa7.45□□□□□ -1.22
PCI8YIL071C IRE1P32361 1115 aa7.44□□□□□ -1.22
PCI8YIL071C ATG3P40344 310 aa7.44□□□□□ -1.22
PCI8YIL071C MET1P36150 593 aa7.43□□□□□ -1.22
PCI8YIL071C YBL036CP38197 257 aa7.43□□□□□ -1.22
PCI8YIL071C HAL5P38970 855 aaKnown RBP7.43□□□□□ -1.22
PCI8YIL071C MRPL16P38064 232 aa7.4□□□□□ -1.22
PCI8YIL071C SLX8P40072 274 aa7.4□□□□□ -1.22
PCI8YIL071C UTP13Q05946 817 aaKnown RBP7.4□□□□□ -1.22
PCI8YIL071C YDJ1P25491 409 aaKnown RBP7.39□□□□□ -1.23
PCI8YIL071C GUA1P38625 525 aaKnown RBP7.39□□□□□ -1.23
PCI8YIL071C SOH1P38633 127 aa7.39□□□□□ -1.23
PCI8YIL071C YCK2P23292 546 aaKnown RBP7.38□□□□□ -1.23
PCI8YIL071C YPP1P46951 817 aa7.38□□□□□ -1.23
PCI8YIL071C HDA3Q06623 655 aa7.38□□□□□ -1.23
PCI8YIL071C YDR215CQ12240 137 aa7.38□□□□□ -1.23
PCI8YIL071C KNS1P32350 737 aaPredicted RBP7.37□□□□□ -1.23
PCI8YIL071C STB3Q12427 513 aa7.37□□□□□ -1.23
PCI8YIL071C PDC6P26263 563 aaKnown RBP7.36□□□□□ -1.23
PCI8YIL071C SHM1P37292 490 aaPredicted RBP7.36□□□□□ -1.23
PCI8YIL071C BRL1P38770 471 aa7.36□□□□□ -1.23
PCI8YIL071C PSH1Q12161 406 aa7.35□□□□□ -1.23
PCI8YIL071C PDC5P16467 563 aaKnown RBP7.34□□□□□ -1.23
PCI8YIL071C TAT1P38085 619 aa7.34□□□□□ -1.23
PCI8YIL071C RPP1AP05318 106 aaPredicted RBP7.33□□□□□ -1.24
PCI8YIL071C AMN1P38285 549 aaPredicted RBP7.33□□□□□ -1.24
PCI8YIL071C SLN1P39928 1220 aaPredicted RBP7.33□□□□□ -1.24
PCI8YIL071C HPC2Q01448 625 aa7.33□□□□□ -1.24
PCI8YIL071C LSB6P42951 607 aa7.32□□□□□ -1.24
PCI8YIL071C TFB3Q03290 321 aa7.32□□□□□ -1.24
PCI8YIL071C SPR3P41901 512 aa7.31□□□□□ -1.24
PCI8YIL071C MCA1Q08601 432 aa7.31□□□□□ -1.24
PCI8YIL071C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
PCI8YIL071C TY1A-DR2Q03964 440 aaKnown RBP7.28□□□□□ -1.24
PCI8YIL071C MAC1P35192 417 aa7.27□□□□□ -1.24
PCI8YIL071C RPN1P38764 993 aaKnown RBP7.27□□□□□ -1.25
PCI8YIL071C YPQ2Q06328 317 aa7.27□□□□□ -1.25
PCI8YIL071C RPS31P05759 152 aaKnown RBP7.26□□□□□ -1.25
PCI8YIL071C SWI5P08153 709 aa7.26□□□□□ -1.25
PCI8YIL071C LEU3P08638 886 aa7.26□□□□□ -1.25
PCI8YIL071C YTA6P40328 754 aa7.26□□□□□ -1.25
PCI8YIL071C LEU1P07264 779 aaKnown RBP7.25□□□□□ -1.25
PCI8YIL071C BIO2P32451 375 aa7.25□□□□□ -1.25
PCI8YIL071C AIM9P40053 627 aaKnown RBP7.25□□□□□ -1.25
PCI8YIL071C PRY1P47032 299 aa7.24□□□□□ -1.25
PCI8YIL071C SUP45P12385 437 aaKnown RBP7.22□□□□□ -1.25
PCI8YIL071C YFL034WP43564 1073 aa7.22□□□□□ -1.25
PCI8YIL071C YNL108CP53929 270 aa7.22□□□□□ -1.25
PCI8YIL071C GLT1Q12680 2145 aaKnown RBP7.21□□□□□ -1.26
PCI8YIL071C ENO2P00925 437 aaKnown RBP7.21□□□□□ -1.26
PCI8YIL071C RGP1P16664 663 aa7.2□□□□□ -1.26
PCI8YIL071C PKC1P24583 1151 aa7.2□□□□□ -1.26
PCI8YIL071C MSC7P38694 644 aa7.2□□□□□ -1.26
PCI8YIL071C YPL034WQ03083 165 aa7.2□□□□□ -1.26
PCI8YIL071C RPS6AP0CX37 236 aaKnown RBP7.19□□□□□ -1.26
PCI8YIL071C RPS6BP0CX38 236 aaPredicted RBP7.19□□□□□ -1.26
PCI8YIL071C MCM1P11746 286 aa7.19□□□□□ -1.26
PCI8YIL071C TPS3P38426 1054 aaKnown RBP7.19□□□□□ -1.26
PCI8YIL071C ALD2P47771 506 aa7.19□□□□□ -1.26
PCI8YIL071C RQC2Q12532 1038 aaKnown RBP7.18□□□□□ -1.26
PCI8YIL071C NHA1Q99271 985 aa7.18□□□□□ -1.26
PCI8YIL071C RIM21P48565 533 aa7.17□□□□□ -1.26
PCI8YIL071C HEH2Q03281 663 aa7.16□□□□□ -1.26
PCI8YIL071C YNL165WP53891 406 aa7.15□□□□□ -1.26
PCI8YIL071C ALO1P54783 526 aaKnown RBP7.15□□□□□ -1.26
PCI8YIL071C MLF3P32047 452 aa7.14□□□□□ -1.27
PCI8YIL071C NTH2P35172 780 aa7.14□□□□□ -1.27
PCI8YIL071C PGM2P37012 569 aaKnown RBP7.14□□□□□ -1.27
PCI8YIL071C ALG14P38242 237 aa7.14□□□□□ -1.27
PCI8YIL071C OMA1P36163 345 aa7.12□□□□□ -1.27
PCI8YIL071C Q0182Q9ZZW1 134 aa7.12□□□□□ -1.27
PCI8YIL071C RDS2P19541 446 aaKnown RBP7.11□□□□□ -1.27
PCI8YIL071C BUD9P53226 547 aa7.11□□□□□ -1.27
PCI8YIL071C NAB2P32505 525 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
PCI8YIL071C PDI1P17967 522 aaKnown RBP7.09□□□□□ -1.27
PCI8YIL071C NCL1P38205 684 aaKnown RBP7.09□□□□□ -1.27
PCI8YIL071C MTO1P53070 669 aa7.09□□□□□ -1.27
PCI8YIL071C TSC13Q99190 310 aa7.08□□□□□ -1.28
PCI8YIL071C CYT1P07143 309 aa7.07□□□□□ -1.28
PCI8YIL071C PRK1P40494 810 aa7.07□□□□□ -1.28
PCI8YIL071C IRC24P40580 263 aa7.07□□□□□ -1.28
PCI8YIL071C YJL007CP47080 104 aa7.06□□□□□ -1.28
PCI8YIL071C INP52P50942 1183 aa7.06□□□□□ -1.28
PCI8YIL071C AI3P03877 415 aa7.04□□□□□ -1.28
PCI8YIL071C NAR1P23503 491 aaKnown RBP7.04□□□□□ -1.28
PCI8YIL071C GIS4Q04233 774 aa7.04□□□□□ -1.28
PCI8YIL071C SKP1P52286 194 aa7.03□□□□□ -1.28
PCI8YIL071C UTP4Q06679 776 aaKnown RBP7.02□□□□□ -1.28
PCI8YIL071C SAC7P17121 654 aa7.01□□□□□ -1.29
PCI8YIL071C MRX10Q05648 414 aa7.01□□□□□ -1.29
PCI8YIL071C RRM3P38766 723 aa7.01□□□□□ -1.29
PCI8YIL071C CUS1Q02554 436 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms